RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 CEP131Q9UPN4 1083 aa22.65■■□□□ 1.22
CACNA1A-257ENST00000638009 CCDC57Q2TAC2 916 aa22.64■■□□□ 1.22
CACNA1A-257ENST00000638009 ME1P48163 572 aa22.64■■□□□ 1.22
CACNA1A-257ENST00000638009 TSNARE1Q96NA8 513 aa22.64■■□□□ 1.22
CACNA1A-257ENST00000638009 FILIP1Q7Z7B0 1213 aa22.63■■□□□ 1.21
CACNA1A-257ENST00000638009 CCDC113Q9H0I3 377 aa22.63■■□□□ 1.21
CACNA1A-257ENST00000638009 RRBP1Q9P2E9 1410 aaKnown RBP22.63■■□□□ 1.21
CACNA1A-257ENST00000638009 LRRC45Q96CN5 670 aa22.62■■□□□ 1.21
CACNA1A-257ENST00000638009 CCDC144AA2RUR9 1427 aa22.62■■□□□ 1.21
CACNA1A-257ENST00000638009 FKBP5Q13451 457 aaPredicted RBP22.62■■□□□ 1.21
CACNA1A-257ENST00000638009 SSR1P43307 286 aaKnown RBP22.62■■□□□ 1.21
CACNA1A-257ENST00000638009 CASQ1P31415 396 aa22.61■■□□□ 1.21
CACNA1A-257ENST00000638009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.61■■□□□ 1.21
CACNA1A-257ENST00000638009 FOSBP53539 338 aa22.61■■□□□ 1.21
CACNA1A-257ENST00000638009 IVLP07476 585 aa22.61■■□□□ 1.21
CACNA1A-257ENST00000638009 NACAP1Q9BZK3 213 aa22.61■■□□□ 1.21
CACNA1A-257ENST00000638009 MSH5O43196 834 aa22.61■■□□□ 1.21
CACNA1A-257ENST00000638009 BCL11BQ9C0K0 894 aaPredicted RBP22.61■■□□□ 1.21
CACNA1A-257ENST00000638009 GOLGA4Q13439 2230 aaKnown RBP22.6■■□□□ 1.21
CACNA1A-257ENST00000638009 SSX2IPQ9Y2D8 614 aa22.6■■□□□ 1.21
CACNA1A-257ENST00000638009 HSPA4P34932 840 aa22.6■■□□□ 1.21
CACNA1A-257ENST00000638009 RAB3IL1Q8TBN0 382 aa22.6■■□□□ 1.21
CACNA1A-257ENST00000638009 VGFO15240 615 aaPredicted RBP22.6■■□□□ 1.21
CACNA1A-257ENST00000638009 EIF5P55010 431 aaKnown RBP22.6■■□□□ 1.21
CACNA1A-257ENST00000638009 GOLGA6L9A6NEM1 432 aa22.6■■□□□ 1.21
CACNA1A-257ENST00000638009 WASF1Q92558 559 aa22.6■■□□□ 1.21
CACNA1A-257ENST00000638009 IKBKGQ9Y6K9 419 aa22.59■■□□□ 1.21
CACNA1A-257ENST00000638009 DNAAF4Q8WXU2 420 aa22.59■■□□□ 1.21
CACNA1A-257ENST00000638009 GPATCH11Q8N954 259 aa22.59■■□□□ 1.21
CACNA1A-257ENST00000638009 MKRN1Q9UHC7 482 aaKnown RBP22.59■■□□□ 1.21
CACNA1A-257ENST00000638009 NSRP1Q9H0G5 558 aaKnown RBP22.59■■□□□ 1.21
CACNA1A-257ENST00000638009 MATR3P43243 847 aaKnown RBP eCLIP22.58■■□□□ 1.21
CACNA1A-257ENST00000638009 SFPQP23246 707 aaKnown RBP eCLIP22.58■■□□□ 1.21
CACNA1A-257ENST00000638009 CRBNQ96SW2 442 aa22.58■■□□□ 1.21
CACNA1A-257ENST00000638009 CPSF2Q9P2I0 782 aaKnown RBP22.58■■□□□ 1.21
CACNA1A-257ENST00000638009 PAFAH1B1P43034 410 aa22.58■■□□□ 1.21
CACNA1A-257ENST00000638009 MLECQ14165 292 aa22.58■■□□□ 1.21
CACNA1A-257ENST00000638009 FAM177A1Q8N128 213 aaPredicted RBP22.58■■□□□ 1.2
CACNA1A-257ENST00000638009 UBE4AQ14139 1066 aa22.58■■□□□ 1.2
CACNA1A-257ENST00000638009 LTV1Q96GA3 475 aaPredicted RBP22.58■■□□□ 1.2
CACNA1A-257ENST00000638009 HMGB2P26583 209 aaKnown RBP22.58■■□□□ 1.2
CACNA1A-257ENST00000638009 CTR9Q6PD62 1173 aa22.58■■□□□ 1.2
CACNA1A-257ENST00000638009 DNAJC2Q99543 621 aaKnown RBP22.57■■□□□ 1.2
CACNA1A-257ENST00000638009 MNAT1P51948 309 aa22.57■■□□□ 1.2
CACNA1A-257ENST00000638009 PTPN14Q15678 1187 aa22.57■■□□□ 1.2
CACNA1A-257ENST00000638009 PLVAPQ9BX97 442 aa22.57■■□□□ 1.2
CACNA1A-257ENST00000638009 SLC4A3P48751 1232 aa22.57■■□□□ 1.2
CACNA1A-257ENST00000638009 RBM10P98175 930 aaKnown RBP22.56■■□□□ 1.2
CACNA1A-257ENST00000638009 UBTFL1P0CB47 393 aaPredicted RBP22.56■■□□□ 1.2
CACNA1A-257ENST00000638009 COMMD10Q9Y6G5 202 aa22.56■■□□□ 1.2
CACNA1A-257ENST00000638009 TNIP1Q15025 636 aa22.56■■□□□ 1.2
CACNA1A-257ENST00000638009 GNAI1P63096 354 aa22.56■■□□□ 1.2
CACNA1A-257ENST00000638009 SPECC1Q5M775 1068 aa22.56■■□□□ 1.2
CACNA1A-257ENST00000638009 UPF3BQ9BZI7 483 aaKnown RBP22.56■■□□□ 1.2
CACNA1A-257ENST00000638009 USO1O60763 962 aaKnown RBP22.56■■□□□ 1.2
CACNA1A-257ENST00000638009 VPS8Q8N3P4 1428 aa22.56■■□□□ 1.2
CACNA1A-257ENST00000638009 SLU7O95391 586 aaKnown RBP22.55■■□□□ 1.2
CACNA1A-257ENST00000638009 FKBP15Q5T1M5 1219 aa22.55■■□□□ 1.2
CACNA1A-257ENST00000638009 PPP4R3AQ6IN85 833 aa22.55■■□□□ 1.2
CACNA1A-257ENST00000638009 GGT6Q6P531 493 aa22.55■■□□□ 1.2
CACNA1A-257ENST00000638009 SAMD1Q6SPF0 538 aaPredicted RBP22.55■■□□□ 1.2
CACNA1A-257ENST00000638009 FIBPO43427 364 aa22.55■■□□□ 1.2
CACNA1A-257ENST00000638009 STMN4Q9H169 189 aaPredicted RBP22.55■■□□□ 1.2
CACNA1A-257ENST00000638009 TUBB4BP68371 445 aa22.55■■□□□ 1.2
CACNA1A-257ENST00000638009 ALS2CR12Q96Q35 445 aa22.55■■□□□ 1.2
CACNA1A-257ENST00000638009 RNF187Q5TA31 235 aaPredicted RBP22.55■■□□□ 1.2
CACNA1A-257ENST00000638009 ZFYP08048 801 aaPredicted RBP22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 CEP135Q66GS9 1140 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 FAM114A2Q9NRY5 505 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 ZSCAN25Q6NSZ9 544 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 CEP112Q8N8E3 955 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 GOPCQ9HD26 462 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 TMCO5BA8MYB1 307 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 NEMFO60524 1076 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 FSD1Q9BTV5 496 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 COG6Q9Y2V7 657 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 LARP1Q6PKG0 1096 aaKnown RBP22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 EHBP1Q8NDI1 1231 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 MPHOSPH9Q99550 1183 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 CYP46A1Q9Y6A2 500 aa22.54■■□□□ 1.2
CACNA1A-257ENST00000638009 CLGNO14967 610 aa22.53■■□□□ 1.2
CACNA1A-257ENST00000638009 CETN1Q12798 172 aa22.53■■□□□ 1.2
CACNA1A-257ENST00000638009 NEUROD6Q96NK8 337 aa22.53■■□□□ 1.2
CACNA1A-257ENST00000638009 ANAPC4Q9UJX5 808 aa22.53■■□□□ 1.2
CACNA1A-257ENST00000638009 CEP83Q9Y592 693 aa22.53■■□□□ 1.2
CACNA1A-257ENST00000638009 CCDC69A6NI79 296 aa22.53■■□□□ 1.2
CACNA1A-257ENST00000638009 FBF1Q8TES7 1133 aa22.53■■□□□ 1.2
CACNA1A-257ENST00000638009 ZHX3Q9H4I2 956 aa22.52■■□□□ 1.2
CACNA1A-257ENST00000638009 USH1CQ9Y6N9 552 aa22.52■■□□□ 1.2
CACNA1A-257ENST00000638009 PIBF1Q8WXW3 757 aa22.52■■□□□ 1.2
CACNA1A-257ENST00000638009 ZNF287Q9HBT7 754 aa22.52■■□□□ 1.2
CACNA1A-257ENST00000638009 PRPF40AO75400 957 aaKnown RBP22.52■■□□□ 1.2
CACNA1A-257ENST00000638009 IPO4Q8TEX9 1081 aaKnown RBP22.52■■□□□ 1.2
CACNA1A-257ENST00000638009 GRPEL1Q9HAV7 217 aa22.52■■□□□ 1.2
CACNA1A-257ENST00000638009 EIF2S2P20042 333 aaKnown RBP22.51■■□□□ 1.19
CACNA1A-257ENST00000638009 SRCIN1Q9C0H9 1055 aa22.51■■□□□ 1.19
CACNA1A-257ENST00000638009 SCAPERQ9BY12 1400 aa22.51■■□□□ 1.19
CACNA1A-257ENST00000638009 GNAI3P08754 354 aa22.51■■□□□ 1.19
CACNA1A-257ENST00000638009 CTNNA2P26232 953 aa22.51■■□□□ 1.19
CACNA1A-257ENST00000638009 TSG101Q99816 390 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms