RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ZBTB7CA1YPR0 619 aa20.28■□□□□ 0.84
CDC42BPB-209ENST00000634889 RGS12O14924 1447 aa20.27■□□□□ 0.84
CDC42BPB-209ENST00000634889 CCDC9Q9Y3X0 531 aaKnown RBP20.27■□□□□ 0.84
CDC42BPB-209ENST00000634889 SPATA31A5Q5VU36 1347 aa20.27■□□□□ 0.83
CDC42BPB-209ENST00000634889 SPATA31A7Q8IWB4 1347 aa20.27■□□□□ 0.83
CDC42BPB-209ENST00000634889 RGPD5Q99666 1765 aa20.26■□□□□ 0.83
CDC42BPB-209ENST00000634889 EVA1CP58658 441 aa20.26■□□□□ 0.83
CDC42BPB-209ENST00000634889 STRN4Q9NRL3 753 aa20.26■□□□□ 0.83
CDC42BPB-209ENST00000634889 AXIN2Q9Y2T1 843 aa20.25■□□□□ 0.83
CDC42BPB-209ENST00000634889 KNSTRNQ9Y448 316 aa20.25■□□□□ 0.83
CDC42BPB-209ENST00000634889 BLMP54132 1417 aaPredicted RBP20.25■□□□□ 0.83
CDC42BPB-209ENST00000634889 SPATA31A1Q5TZJ5 1347 aa20.24■□□□□ 0.83
CDC42BPB-209ENST00000634889 RTL1A6NKG5 1358 aa20.23■□□□□ 0.83
CDC42BPB-209ENST00000634889 CRB1P82279 1406 aa20.23■□□□□ 0.83
CDC42BPB-209ENST00000634889 MAP3K19Q56UN5 1328 aa20.23■□□□□ 0.83
CDC42BPB-209ENST00000634889 KIF24Q5T7B8 1368 aa20.22■□□□□ 0.83
CDC42BPB-209ENST00000634889 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
CDC42BPB-209ENST00000634889 LARP1Q6PKG0 1096 aaKnown RBP20.22■□□□□ 0.83
CDC42BPB-209ENST00000634889 WDR17Q8IZU2 1322 aa20.22■□□□□ 0.83
CDC42BPB-209ENST00000634889 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
CDC42BPB-209ENST00000634889 FAM208AQ9UK61 1670 aaKnown RBP20.2■□□□□ 0.82
CDC42BPB-209ENST00000634889 THSD7AQ9UPZ6 1657 aa20.2■□□□□ 0.82
CDC42BPB-209ENST00000634889 IP6K1Q92551 441 aa20.2■□□□□ 0.82
CDC42BPB-209ENST00000634889 AMER1Q5JTC6 1135 aaPredicted RBP20.19■□□□□ 0.82
CDC42BPB-209ENST00000634889 THRAP3Q9Y2W1 955 aaKnown RBP20.19■□□□□ 0.82
CDC42BPB-209ENST00000634889 ERBB3P21860 1342 aa20.19■□□□□ 0.82
CDC42BPB-209ENST00000634889 HOXC9P31274 260 aa20.18■□□□□ 0.82
CDC42BPB-209ENST00000634889 AMPHP49418 695 aa20.18■□□□□ 0.82
CDC42BPB-209ENST00000634889 RRS1Q15050 365 aaKnown RBP20.18■□□□□ 0.82
CDC42BPB-209ENST00000634889 BARGINQ6ZT62 677 aa20.18■□□□□ 0.82
CDC42BPB-209ENST00000634889 NPC1L1Q9UHC9 1359 aa20.18■□□□□ 0.82
CDC42BPB-209ENST00000634889 PEAK1Q9H792 1746 aa20.17■□□□□ 0.82
CDC42BPB-209ENST00000634889 FBLN1P23142 703 aa20.17■□□□□ 0.82
CDC42BPB-209ENST00000634889 FAM98CQ17RN3 349 aaKnown RBP20.17■□□□□ 0.82
CDC42BPB-209ENST00000634889 TOM1L2Q6ZVM7 507 aa20.17■□□□□ 0.82
CDC42BPB-209ENST00000634889 TCP11L2Q8N4U5 519 aa20.17■□□□□ 0.82
CDC42BPB-209ENST00000634889 FLT4P35916 1363 aa20.17■□□□□ 0.82
CDC42BPB-209ENST00000634889 MAP2P11137 1827 aaKnown RBP20.16■□□□□ 0.82
CDC42BPB-209ENST00000634889 WNK3Q9BYP7 1800 aa20.16■□□□□ 0.82
CDC42BPB-209ENST00000634889 SOCS7O14512 581 aa20.16■□□□□ 0.82
CDC42BPB-209ENST00000634889 CSB-PGBD3P0DP91 1061 aa20.16■□□□□ 0.82
CDC42BPB-209ENST00000634889 SEPT12Q8IYM1 358 aa20.15■□□□□ 0.82
CDC42BPB-209ENST00000634889 ANKRD24Q8TF21 1146 aa20.15■□□□□ 0.82
CDC42BPB-209ENST00000634889 USP35Q9P2H5 1018 aa20.15■□□□□ 0.82
CDC42BPB-209ENST00000634889 BRWD3Q6RI45 1802 aa20.15■□□□□ 0.82
CDC42BPB-209ENST00000634889 INSRP06213 1382 aa20.14■□□□□ 0.81
CDC42BPB-209ENST00000634889 MORC1Q86VD1 984 aa20.14■□□□□ 0.81
CDC42BPB-209ENST00000634889 CARD10Q9BWT7 1032 aa20.14■□□□□ 0.81
CDC42BPB-209ENST00000634889 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
CDC42BPB-209ENST00000634889 SMG6Q86US8 1419 aaKnown RBP20.12■□□□□ 0.81
CDC42BPB-209ENST00000634889 A0A0G2JS52 829 aa20.12■□□□□ 0.81
CDC42BPB-209ENST00000634889 MYT1Q01538 1121 aa20.12■□□□□ 0.81
CDC42BPB-209ENST00000634889 EMILIN1Q9Y6C2 1016 aa20.12■□□□□ 0.81
CDC42BPB-209ENST00000634889 POLKQ9UBT6 870 aa20.11■□□□□ 0.81
CDC42BPB-209ENST00000634889 TNNT2P45379 298 aaPredicted RBP20.1■□□□□ 0.81
CDC42BPB-209ENST00000634889 CDCA7Q9BWT1 371 aaPredicted RBP20.1■□□□□ 0.81
CDC42BPB-209ENST00000634889 NLRP2Q9NX02 1062 aa20.09■□□□□ 0.81
CDC42BPB-209ENST00000634889 DISP2A7MBM2 1401 aa20.09■□□□□ 0.81
CDC42BPB-209ENST00000634889 LRRC37A3O60309 1634 aa20.09■□□□□ 0.81
CDC42BPB-209ENST00000634889 EP400Q96L91 3159 aa20.08■□□□□ 0.81
CDC42BPB-209ENST00000634889 PPM1GO15355 546 aaPredicted RBP20.08■□□□□ 0.81
CDC42BPB-209ENST00000634889 HSP90AB2PQ58FF8 381 aa20.08■□□□□ 0.81
CDC42BPB-209ENST00000634889 CC2D1BQ5T0F9 858 aaKnown RBP20.08■□□□□ 0.81
CDC42BPB-209ENST00000634889 KRT27Q7Z3Y8 459 aa20.08■□□□□ 0.81
CDC42BPB-209ENST00000634889 LTV1Q96GA3 475 aaPredicted RBP20.07■□□□□ 0.8
CDC42BPB-209ENST00000634889 RGPD2P0DJD1 1756 aa20.06■□□□□ 0.8
CDC42BPB-209ENST00000634889 IL2RBP14784 551 aa20.02■□□□□ 0.8
CDC42BPB-209ENST00000634889 NBPF6Q5VWK0 638 aa20.02■□□□□ 0.8
CDC42BPB-209ENST00000634889 NBPF4Q96M43 638 aa20.02■□□□□ 0.8
CDC42BPB-209ENST00000634889 NCAPD2Q15021 1401 aa20.02■□□□□ 0.79
CDC42BPB-209ENST00000634889 TNS2Q63HR2 1409 aa20.02■□□□□ 0.79
CDC42BPB-209ENST00000634889 PDE3BQ13370 1112 aa20.01■□□□□ 0.79
CDC42BPB-209ENST00000634889 DDB1Q16531 1140 aa20.01■□□□□ 0.79
CDC42BPB-209ENST00000634889 UPF1Q92900 1129 aaKnown RBP eCLIP20■□□□□ 0.79
CDC42BPB-209ENST00000634889 DDX10Q13206 875 aaKnown RBP19.99■□□□□ 0.79
CDC42BPB-209ENST00000634889 MTHFSP49914 203 aa19.98■□□□□ 0.79
CDC42BPB-209ENST00000634889 EIF4A2Q14240 407 aaKnown RBP19.98■□□□□ 0.79
CDC42BPB-209ENST00000634889 OVOS2A0A0G2JMS6 1433 aa19.97■□□□□ 0.79
CDC42BPB-209ENST00000634889 EXOC5O00471 708 aa19.97■□□□□ 0.79
CDC42BPB-209ENST00000634889 CCDC125Q86Z20 511 aa19.97■□□□□ 0.79
CDC42BPB-209ENST00000634889 MEGF6O75095 1541 aa19.97■□□□□ 0.79
CDC42BPB-209ENST00000634889 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
CDC42BPB-209ENST00000634889 CNGB1Q14028 1251 aaPredicted RBP19.96■□□□□ 0.79
CDC42BPB-209ENST00000634889 FAM196AQ6ZSG2 479 aa19.96■□□□□ 0.79
CDC42BPB-209ENST00000634889 PARD3Q8TEW0 1356 aa19.95■□□□□ 0.79
CDC42BPB-209ENST00000634889 BCL9O00512 1426 aa19.95■□□□□ 0.78
CDC42BPB-209ENST00000634889 USHBP1Q8N6Y0 703 aa19.95■□□□□ 0.78
CDC42BPB-209ENST00000634889 RAPGEF4Q8WZA2 1011 aa19.95■□□□□ 0.78
CDC42BPB-209ENST00000634889 EYA1Q99502 592 aa19.95■□□□□ 0.78
CDC42BPB-209ENST00000634889 RGPD1P0DJD0 1748 aa19.95■□□□□ 0.78
CDC42BPB-209ENST00000634889 IGSF1Q8N6C5 1336 aa19.95■□□□□ 0.78
CDC42BPB-209ENST00000634889 FAM182BQ5T319 152 aa19.94■□□□□ 0.78
CDC42BPB-209ENST00000634889 PLEKHG2Q9H7P9 1386 aa19.94■□□□□ 0.78
CDC42BPB-209ENST00000634889 SHANK3Q9BYB0 1731 aa19.93■□□□□ 0.78
CDC42BPB-209ENST00000634889 PKD1L3Q7Z443 1732 aa19.92■□□□□ 0.78
CDC42BPB-209ENST00000634889 COL3A1P02461 1466 aaPredicted RBP19.92■□□□□ 0.78
CDC42BPB-209ENST00000634889 TATP17735 454 aaPredicted RBP19.91■□□□□ 0.78
CDC42BPB-209ENST00000634889 PPP2R1AP30153 589 aa19.91■□□□□ 0.78
CDC42BPB-209ENST00000634889 IL13P35225 146 aa19.91■□□□□ 0.78
CDC42BPB-209ENST00000634889 MARCH10Q8NA82 808 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 1595.6 ms