RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 WDR33Q9C0J8 1336 aaKnown RBP10.51□□□□□ -0.73
GABRB3-216ENST00000628124 PPM1FP49593 454 aaPredicted RBP10.51□□□□□ -0.73
GABRB3-216ENST00000628124 CNNM1Q9NRU3 951 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 GCOM1H8Y6P7 765 aaPredicted RBP10.51□□□□□ -0.73
GABRB3-216ENST00000628124 MYZAPP0CAP1 466 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 NEK4P51957 841 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 PPP4R3AQ6IN85 833 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 VPS36Q86VN1 386 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 ME1P48163 572 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 HOOK3Q86VS8 718 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 CCDC102AQ96A19 550 aa10.51□□□□□ -0.73
GABRB3-216ENST00000628124 SSR1P43307 286 aaKnown RBP10.5□□□□□ -0.73
GABRB3-216ENST00000628124 KIAA1328Q86T90 577 aa10.5□□□□□ -0.73
GABRB3-216ENST00000628124 FAM107BQ9H098 131 aa10.5□□□□□ -0.73
GABRB3-216ENST00000628124 CFAP57Q96MR6 1250 aa10.5□□□□□ -0.73
GABRB3-216ENST00000628124 FIBPO43427 364 aa10.5□□□□□ -0.73
GABRB3-216ENST00000628124 ZNF76P36508 570 aa10.5□□□□□ -0.73
GABRB3-216ENST00000628124 EIF5P55010 431 aaKnown RBP10.5□□□□□ -0.73
GABRB3-216ENST00000628124 ARHGAP29Q52LW3 1261 aa10.5□□□□□ -0.73
GABRB3-216ENST00000628124 CFAP45Q9UL16 551 aa10.5□□□□□ -0.73
GABRB3-216ENST00000628124 CEP131Q9UPN4 1083 aa10.5□□□□□ -0.73
GABRB3-216ENST00000628124 MICALCLQ6ZW33 695 aa10.5□□□□□ -0.73
GABRB3-216ENST00000628124 BCL11BQ9C0K0 894 aaPredicted RBP10.5□□□□□ -0.73
GABRB3-216ENST00000628124 CTNNA3Q9UI47 895 aa10.5□□□□□ -0.73
GABRB3-216ENST00000628124 PABPN1LA6NDY0 278 aaKnown RBP10.49□□□□□ -0.73
GABRB3-216ENST00000628124 PRPF40AO75400 957 aaKnown RBP10.49□□□□□ -0.73
GABRB3-216ENST00000628124 FAM193AP78312 1265 aa10.49□□□□□ -0.73
GABRB3-216ENST00000628124 PLEKHO1Q53GL0 409 aaPredicted RBP10.49□□□□□ -0.73
GABRB3-216ENST00000628124 GCC1Q96CN9 775 aa10.49□□□□□ -0.73
GABRB3-216ENST00000628124 PRKRIP1Q9H875 184 aaPredicted RBP10.49□□□□□ -0.73
GABRB3-216ENST00000628124 SSBP05455 408 aaKnown RBP eCLIP10.49□□□□□ -0.73
GABRB3-216ENST00000628124 DDX23Q9BUQ8 820 aaKnown RBP10.49□□□□□ -0.73
GABRB3-216ENST00000628124 NFKBIBQ15653 356 aa10.48□□□□□ -0.73
GABRB3-216ENST00000628124 SPA17Q15506 151 aa10.48□□□□□ -0.73
GABRB3-216ENST00000628124 UBXN4Q92575 508 aa10.48□□□□□ -0.73
GABRB3-216ENST00000628124 ZNF287Q9HBT7 754 aa10.48□□□□□ -0.73
GABRB3-216ENST00000628124 FERP16591 822 aa10.48□□□□□ -0.73
GABRB3-216ENST00000628124 ZSCAN31Q96LW9 406 aaPredicted RBP10.48□□□□□ -0.73
GABRB3-216ENST00000628124 KDM4AO75164 1064 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 SPC24Q8NBT2 197 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 TAOK3Q9H2K8 898 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 TMOD2Q9NZR1 351 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 GSTTP1A0A1W2PQM5 241 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 KIF20AO95235 890 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 KRT32Q14532 448 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 TMCO3Q6UWJ1 677 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 CCDC150Q8NCX0 1101 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 PNISRQ8TF01 805 aaKnown RBP10.47□□□□□ -0.73
GABRB3-216ENST00000628124 UBAC1Q9BSL1 405 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 GPRASP1Q5JY77 1395 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 FGFR1OPO95684 399 aaKnown RBP10.47□□□□□ -0.73
GABRB3-216ENST00000628124 FERMT1Q9BQL6 677 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 RRBP1Q9P2E9 1410 aaKnown RBP10.47□□□□□ -0.73
GABRB3-216ENST00000628124 DHX57Q6P158 1386 aaKnown RBP10.47□□□□□ -0.73
GABRB3-216ENST00000628124 GIGYF2Q6Y7W6 1299 aaKnown RBP10.47□□□□□ -0.73
GABRB3-216ENST00000628124 UPF3BQ9BZI7 483 aaKnown RBP10.47□□□□□ -0.73
GABRB3-216ENST00000628124 COMMD10Q9Y6G5 202 aa10.47□□□□□ -0.73
GABRB3-216ENST00000628124 GNAI2P04899 355 aa10.46□□□□□ -0.73
GABRB3-216ENST00000628124 C6orf163Q5TEZ5 329 aa10.46□□□□□ -0.73
GABRB3-216ENST00000628124 DDX11Q96FC9 970 aa10.46□□□□□ -0.73
GABRB3-216ENST00000628124 SMG6Q86US8 1419 aaKnown RBP10.46□□□□□ -0.73
GABRB3-216ENST00000628124 ZSCAN12O43309 604 aa10.46□□□□□ -0.73
GABRB3-216ENST00000628124 TSG101Q99816 390 aa10.46□□□□□ -0.73
GABRB3-216ENST00000628124 CEBPZQ03701 1054 aaKnown RBP10.46□□□□□ -0.74
GABRB3-216ENST00000628124 FKBP15Q5T1M5 1219 aa10.46□□□□□ -0.74
GABRB3-216ENST00000628124 SRCIN1Q9C0H9 1055 aa10.46□□□□□ -0.74
GABRB3-216ENST00000628124 HOMER2Q9NSB8 354 aa10.46□□□□□ -0.74
GABRB3-216ENST00000628124 PPP6R1Q9UPN7 881 aa10.46□□□□□ -0.74
GABRB3-216ENST00000628124 DDX12PQ92771 950 aa10.46□□□□□ -0.74
GABRB3-216ENST00000628124 IFFO1Q0D2I5 559 aa10.45□□□□□ -0.74
GABRB3-216ENST00000628124 TMEM87AQ8NBN3 555 aa10.45□□□□□ -0.74
GABRB3-216ENST00000628124 USP47Q96K76 1375 aa10.45□□□□□ -0.74
GABRB3-216ENST00000628124 NUP133Q8WUM0 1156 aa10.45□□□□□ -0.74
GABRB3-216ENST00000628124 RBM5P52756 815 aaKnown RBP eCLIP10.45□□□□□ -0.74
GABRB3-216ENST00000628124 LARP1Q6PKG0 1096 aaKnown RBP10.45□□□□□ -0.74
GABRB3-216ENST00000628124 CCDC83Q8IWF9 413 aa10.45□□□□□ -0.74
GABRB3-216ENST00000628124 CCDC175P0C221 793 aa10.45□□□□□ -0.74
GABRB3-216ENST00000628124 LUZP1Q86V48 1076 aa10.45□□□□□ -0.74
GABRB3-216ENST00000628124 TSNARE1Q96NA8 513 aa10.45□□□□□ -0.74
GABRB3-216ENST00000628124 MPHOSPH8Q99549 860 aa10.45□□□□□ -0.74
GABRB3-216ENST00000628124 LARP1BQ659C4 914 aaKnown RBP10.44□□□□□ -0.74
GABRB3-216ENST00000628124 CCDC113Q9H0I3 377 aa10.44□□□□□ -0.74
GABRB3-216ENST00000628124 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.44□□□□□ -0.74
GABRB3-216ENST00000628124 SSX2IPQ9Y2D8 614 aa10.44□□□□□ -0.74
GABRB3-216ENST00000628124 V9GYY5 206 aaPredicted RBP10.44□□□□□ -0.74
GABRB3-216ENST00000628124 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
GABRB3-216ENST00000628124 FAM177A1Q8N128 213 aaPredicted RBP10.44□□□□□ -0.74
GABRB3-216ENST00000628124 SCLT1Q96NL6 688 aa10.44□□□□□ -0.74
GABRB3-216ENST00000628124 RBM42Q9BTD8 480 aaKnown RBP10.44□□□□□ -0.74
GABRB3-216ENST00000628124 SPATA32Q96LK8 384 aa10.44□□□□□ -0.74
GABRB3-216ENST00000628124 PAFAH1B1P43034 410 aa10.44□□□□□ -0.74
GABRB3-216ENST00000628124 CCT4P50991 539 aaKnown RBP10.44□□□□□ -0.74
GABRB3-216ENST00000628124 ZSCAN29Q8IWY8 852 aaPredicted RBP10.44□□□□□ -0.74
GABRB3-216ENST00000628124 RAB34Q9BZG1 259 aa10.44□□□□□ -0.74
GABRB3-216ENST00000628124 NUP62CLQ9H1M0 184 aa10.44□□□□□ -0.74
GABRB3-216ENST00000628124 PHAXQ9H814 394 aaKnown RBP10.44□□□□□ -0.74
GABRB3-216ENST00000628124 POLR3GO15318 223 aaPredicted RBP10.44□□□□□ -0.74
GABRB3-216ENST00000628124 SPECC1LQ69YQ0 1117 aa10.44□□□□□ -0.74
GABRB3-216ENST00000628124 LRRC45Q96CN5 670 aa10.44□□□□□ -0.74
GABRB3-216ENST00000628124 BLOC1S2Q6QNY1 142 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms