RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 NRAPQ86VF7 1730 aa26.92■■□□□ 1.9
PDLIM2-221ENST00000622702 RBM6P78332 1123 aaKnown RBP26.92■■□□□ 1.9
PDLIM2-221ENST00000622702 AATKQ6ZMQ8 1374 aa26.91■■□□□ 1.9
PDLIM2-221ENST00000622702 NFAT5O94916 1531 aa26.91■■□□□ 1.9
PDLIM2-221ENST00000622702 ARHGEF25Q86VW2 580 aa26.88■■□□□ 1.89
PDLIM2-221ENST00000622702 LMO7Q8WWI1 1683 aa26.88■■□□□ 1.89
PDLIM2-221ENST00000622702 VPS72Q15906 364 aa26.87■■□□□ 1.89
PDLIM2-221ENST00000622702 GJD4Q96KN9 370 aaPredicted RBP26.87■■□□□ 1.89
PDLIM2-221ENST00000622702 CCDC9Q9Y3X0 531 aaKnown RBP26.87■■□□□ 1.89
PDLIM2-221ENST00000622702 CAMTA1Q9Y6Y1 1673 aa26.87■■□□□ 1.89
PDLIM2-221ENST00000622702 TNNT2P45379 298 aaPredicted RBP26.87■■□□□ 1.89
PDLIM2-221ENST00000622702 STRN4Q9NRL3 753 aa26.86■■□□□ 1.89
PDLIM2-221ENST00000622702 COL18A1P39060 1754 aa26.84■■□□□ 1.89
PDLIM2-221ENST00000622702 EVA1CP58658 441 aa26.84■■□□□ 1.89
PDLIM2-221ENST00000622702 LTN1O94822 1766 aa26.84■■□□□ 1.89
PDLIM2-221ENST00000622702 MYBBP1AQ9BQG0 1328 aaKnown RBP26.83■■□□□ 1.89
PDLIM2-221ENST00000622702 FBLN1P23142 703 aa26.83■■□□□ 1.89
PDLIM2-221ENST00000622702 PPP2R1AP30153 589 aa26.83■■□□□ 1.89
PDLIM2-221ENST00000622702 GLI3P10071 1580 aa26.83■■□□□ 1.89
PDLIM2-221ENST00000622702 CDK12Q9NYV4 1490 aaPredicted RBP26.82■■□□□ 1.88
PDLIM2-221ENST00000622702 POLKQ9UBT6 870 aa26.81■■□□□ 1.88
PDLIM2-221ENST00000622702 AXIN2Q9Y2T1 843 aa26.81■■□□□ 1.88
PDLIM2-221ENST00000622702 SMG6Q86US8 1419 aaKnown RBP26.81■■□□□ 1.88
PDLIM2-221ENST00000622702 MAP3K19Q56UN5 1328 aa26.8■■□□□ 1.88
PDLIM2-221ENST00000622702 RGPD5Q99666 1765 aa26.8■■□□□ 1.88
PDLIM2-221ENST00000622702 RRS1Q15050 365 aaKnown RBP26.8■■□□□ 1.88
PDLIM2-221ENST00000622702 MAP2P11137 1827 aaKnown RBP26.8■■□□□ 1.88
PDLIM2-221ENST00000622702 COL5A2P05997 1499 aaPredicted RBP26.79■■□□□ 1.88
PDLIM2-221ENST00000622702 RGS12O14924 1447 aa26.79■■□□□ 1.88
PDLIM2-221ENST00000622702 KIF24Q5T7B8 1368 aa26.79■■□□□ 1.88
PDLIM2-221ENST00000622702 LARP1Q6PKG0 1096 aaKnown RBP26.78■■□□□ 1.88
PDLIM2-221ENST00000622702 SPATA31A5Q5VU36 1347 aa26.78■■□□□ 1.88
PDLIM2-221ENST00000622702 SPATA31A7Q8IWB4 1347 aa26.78■■□□□ 1.88
PDLIM2-221ENST00000622702 EMILIN1Q9Y6C2 1016 aa26.77■■□□□ 1.88
PDLIM2-221ENST00000622702 MTHFSP49914 203 aa26.76■■□□□ 1.87
PDLIM2-221ENST00000622702 ABCC6O95255 1503 aa26.76■■□□□ 1.87
PDLIM2-221ENST00000622702 RTL1A6NKG5 1358 aa26.75■■□□□ 1.87
PDLIM2-221ENST00000622702 SPATA31A1Q5TZJ5 1347 aa26.74■■□□□ 1.87
PDLIM2-221ENST00000622702 MIER1Q8N108 512 aa26.73■■□□□ 1.87
PDLIM2-221ENST00000622702 USP35Q9P2H5 1018 aa26.73■■□□□ 1.87
PDLIM2-221ENST00000622702 PEAK1Q9H792 1746 aa26.73■■□□□ 1.87
PDLIM2-221ENST00000622702 FLT4P35916 1363 aa26.72■■□□□ 1.87
PDLIM2-221ENST00000622702 AMPHP49418 695 aa26.72■■□□□ 1.87
PDLIM2-221ENST00000622702 FAM98CQ17RN3 349 aaKnown RBP26.72■■□□□ 1.87
PDLIM2-221ENST00000622702 INSRP06213 1382 aa26.72■■□□□ 1.87
PDLIM2-221ENST00000622702 IP6K1Q92551 441 aa26.71■■□□□ 1.87
PDLIM2-221ENST00000622702 WDR17Q8IZU2 1322 aa26.71■■□□□ 1.87
PDLIM2-221ENST00000622702 CRB1P82279 1406 aa26.71■■□□□ 1.87
PDLIM2-221ENST00000622702 PPM1GO15355 546 aaPredicted RBP26.7■■□□□ 1.87
PDLIM2-221ENST00000622702 ONECUT3O60422 494 aaPredicted RBP26.7■■□□□ 1.87
PDLIM2-221ENST00000622702 CSB-PGBD3P0DP91 1061 aa26.7■■□□□ 1.87
PDLIM2-221ENST00000622702 HOXC9P31274 260 aa26.7■■□□□ 1.87
PDLIM2-221ENST00000622702 TOM1L2Q6ZVM7 507 aa26.7■■□□□ 1.87
PDLIM2-221ENST00000622702 SOCS7O14512 581 aa26.69■■□□□ 1.86
PDLIM2-221ENST00000622702 A0A0G2JS52 829 aa26.68■■□□□ 1.86
PDLIM2-221ENST00000622702 MYT1Q01538 1121 aa26.68■■□□□ 1.86
PDLIM2-221ENST00000622702 SEPT12Q8IYM1 358 aa26.68■■□□□ 1.86
PDLIM2-221ENST00000622702 BLMP54132 1417 aaPredicted RBP26.68■■□□□ 1.86
PDLIM2-221ENST00000622702 CCER2I3L3R5 266 aa26.67■■□□□ 1.86
PDLIM2-221ENST00000622702 CFAP53Q96M91 514 aa26.67■■□□□ 1.86
PDLIM2-221ENST00000622702 ERBB3P21860 1342 aa26.66■■□□□ 1.86
PDLIM2-221ENST00000622702 HSP90AB2PQ58FF8 381 aa26.66■■□□□ 1.86
PDLIM2-221ENST00000622702 TCP11L2Q8N4U5 519 aa26.66■■□□□ 1.86
PDLIM2-221ENST00000622702 ANKRD24Q8TF21 1146 aa26.66■■□□□ 1.86
PDLIM2-221ENST00000622702 COL3A1P02461 1466 aaPredicted RBP26.65■■□□□ 1.86
PDLIM2-221ENST00000622702 BRWD3Q6RI45 1802 aa26.64■■□□□ 1.86
PDLIM2-221ENST00000622702 LTV1Q96GA3 475 aaPredicted RBP26.64■■□□□ 1.86
PDLIM2-221ENST00000622702 THRAP3Q9Y2W1 955 aaKnown RBP26.64■■□□□ 1.86
PDLIM2-221ENST00000622702 BARGINQ6ZT62 677 aa26.63■■□□□ 1.85
PDLIM2-221ENST00000622702 CCDC184Q52MB2 194 aa26.62■■□□□ 1.85
PDLIM2-221ENST00000622702 CARD10Q9BWT7 1032 aa26.62■■□□□ 1.85
PDLIM2-221ENST00000622702 THSD7AQ9UPZ6 1657 aa26.62■■□□□ 1.85
PDLIM2-221ENST00000622702 NLRP2Q9NX02 1062 aa26.61■■□□□ 1.85
PDLIM2-221ENST00000622702 MRS2Q9HD23 443 aa26.6■■□□□ 1.85
PDLIM2-221ENST00000622702 DIAPH1O60610 1272 aaKnown RBP26.59■■□□□ 1.85
PDLIM2-221ENST00000622702 IL13P35225 146 aa26.58■■□□□ 1.85
PDLIM2-221ENST00000622702 EIF4A2Q14240 407 aaKnown RBP26.58■■□□□ 1.85
PDLIM2-221ENST00000622702 FAM208AQ9UK61 1670 aaKnown RBP26.58■■□□□ 1.84
PDLIM2-221ENST00000622702 EP400Q96L91 3159 aa26.57■■□□□ 1.84
PDLIM2-221ENST00000622702 KRT27Q7Z3Y8 459 aa26.56■■□□□ 1.84
PDLIM2-221ENST00000622702 WNK3Q9BYP7 1800 aa26.55■■□□□ 1.84
PDLIM2-221ENST00000622702 RGPD2P0DJD1 1756 aa26.54■■□□□ 1.84
PDLIM2-221ENST00000622702 NUDCQ9Y266 331 aa26.54■■□□□ 1.84
PDLIM2-221ENST00000622702 PARP4Q9UKK3 1724 aaKnown RBP26.53■■□□□ 1.84
PDLIM2-221ENST00000622702 PNISRQ8TF01 805 aaKnown RBP26.51■■□□□ 1.83
PDLIM2-221ENST00000622702 CDCA7Q9BWT1 371 aaPredicted RBP26.51■■□□□ 1.83
PDLIM2-221ENST00000622702 DISP2A7MBM2 1401 aa26.5■■□□□ 1.83
PDLIM2-221ENST00000622702 RGPD1P0DJD0 1748 aa26.5■■□□□ 1.83
PDLIM2-221ENST00000622702 PDE3BQ13370 1112 aa26.49■■□□□ 1.83
PDLIM2-221ENST00000622702 EYA1Q99502 592 aa26.49■■□□□ 1.83
PDLIM2-221ENST00000622702 FAM182BQ5T319 152 aa26.49■■□□□ 1.83
PDLIM2-221ENST00000622702 NBPF6Q5VWK0 638 aa26.49■■□□□ 1.83
PDLIM2-221ENST00000622702 UPF1Q92900 1129 aaKnown RBP eCLIP26.49■■□□□ 1.834e-7■■■■■ 26.8
PDLIM2-221ENST00000622702 NBPF4Q96M43 638 aa26.49■■□□□ 1.83
PDLIM2-221ENST00000622702 IGSF1Q8N6C5 1336 aa26.48■■□□□ 1.83
PDLIM2-221ENST00000622702 LRRC37A3O60309 1634 aa26.48■■□□□ 1.83
PDLIM2-221ENST00000622702 DDB1Q16531 1140 aa26.48■■□□□ 1.83
PDLIM2-221ENST00000622702 NCAPD2Q15021 1401 aa26.47■■□□□ 1.83
PDLIM2-221ENST00000622702 U2SURPO15042 1029 aaKnown RBP26.47■■□□□ 1.83
PDLIM2-221ENST00000622702 IL2RBP14784 551 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms