RNA–Protein interactions for RNA: ENST00000622063.4

CHRDL2-210, Transcript of chordin like 2, humanhuman

TSL 5 BASIC

Gene CHRDL2, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-210ENST00000622063 COL14A1Q05707 1796 aaKnown RBP27.73■■■□□ 2.03
CHRDL2-210ENST00000622063 PPP2R1AP30153 589 aa27.72■■■□□ 2.03
CHRDL2-210ENST00000622063 AXIN2Q9Y2T1 843 aa27.72■■■□□ 2.03
CHRDL2-210ENST00000622063 MAP2P11137 1827 aaKnown RBP27.72■■■□□ 2.03
CHRDL2-210ENST00000622063 HOXC9P31274 260 aa27.72■■■□□ 2.03
CHRDL2-210ENST00000622063 MTHFSP49914 203 aa27.72■■■□□ 2.03
CHRDL2-210ENST00000622063 KIF24Q5T7B8 1368 aa27.71■■■□□ 2.03
CHRDL2-210ENST00000622063 FNBP4Q8N3X1 1017 aaPredicted RBP27.71■■■□□ 2.03
CHRDL2-210ENST00000622063 RTL1A6NKG5 1358 aa27.7■■■□□ 2.03
CHRDL2-210ENST00000622063 FLT4P35916 1363 aa27.7■■■□□ 2.03
CHRDL2-210ENST00000622063 AFF2P51816 1311 aa27.69■■■□□ 2.02
CHRDL2-210ENST00000622063 SLIT2O94813 1529 aa27.68■■■□□ 2.02
CHRDL2-210ENST00000622063 EVA1CP58658 441 aa27.68■■■□□ 2.02
CHRDL2-210ENST00000622063 HSP90AB2PQ58FF8 381 aa27.68■■■□□ 2.02
CHRDL2-210ENST00000622063 USP21Q9UK80 565 aa27.68■■■□□ 2.02
CHRDL2-210ENST00000622063 CAMTA1Q9Y6Y1 1673 aa27.67■■■□□ 2.02
CHRDL2-210ENST00000622063 COL18A1P39060 1754 aa27.67■■■□□ 2.02
CHRDL2-210ENST00000622063 SMG6Q86US8 1419 aaKnown RBP27.67■■■□□ 2.02
CHRDL2-210ENST00000622063 ABCC6O95255 1503 aa27.67■■■□□ 2.02
CHRDL2-210ENST00000622063 CENPBP07199 599 aaPredicted RBP27.67■■■□□ 2.02
CHRDL2-210ENST00000622063 FAM9BQ8IZU0 186 aa27.67■■■□□ 2.02
CHRDL2-210ENST00000622063 LMO7Q8WWI1 1683 aa27.67■■■□□ 2.02
CHRDL2-210ENST00000622063 BLMP54132 1417 aaPredicted RBP27.67■■■□□ 2.02
CHRDL2-210ENST00000622063 PNISRQ8TF01 805 aaKnown RBP27.66■■■□□ 2.02
CHRDL2-210ENST00000622063 STRN4Q9NRL3 753 aa27.66■■■□□ 2.02
CHRDL2-210ENST00000622063 PEAK1Q9H792 1746 aa27.66■■■□□ 2.02
CHRDL2-210ENST00000622063 PLCH1Q4KWH8 1693 aa27.66■■■□□ 2.02
CHRDL2-210ENST00000622063 UNC5CLQ8IV45 518 aa27.65■■■□□ 2.02
CHRDL2-210ENST00000622063 INSRP06213 1382 aa27.64■■■□□ 2.02
CHRDL2-210ENST00000622063 LTV1Q96GA3 475 aaPredicted RBP27.64■■■□□ 2.02
CHRDL2-210ENST00000622063 ANKRD24Q8TF21 1146 aa27.63■■■□□ 2.01
CHRDL2-210ENST00000622063 PHF23Q9BUL5 403 aaPredicted RBP27.63■■■□□ 2.01
CHRDL2-210ENST00000622063 BCL9LQ86UU0 1499 aa27.63■■■□□ 2.01
CHRDL2-210ENST00000622063 NWD2Q9ULI1 1742 aa27.62■■■□□ 2.01
CHRDL2-210ENST00000622063 CSB-PGBD3P0DP91 1061 aa27.62■■■□□ 2.01
CHRDL2-210ENST00000622063 COL5A2P05997 1499 aaPredicted RBP27.62■■■□□ 2.01
CHRDL2-210ENST00000622063 CDK12Q9NYV4 1490 aaPredicted RBP27.62■■■□□ 2.01
CHRDL2-210ENST00000622063 CFAP53Q96M91 514 aa27.61■■■□□ 2.01
CHRDL2-210ENST00000622063 ERBB3P21860 1342 aa27.61■■■□□ 2.01
CHRDL2-210ENST00000622063 RGPD5Q99666 1765 aa27.6■■■□□ 2.01
CHRDL2-210ENST00000622063 ZNF772Q68DY9 489 aaPredicted RBP27.6■■■□□ 2.01
CHRDL2-210ENST00000622063 WDR17Q8IZU2 1322 aa27.58■■■□□ 2.01
CHRDL2-210ENST00000622063 LARP1Q6PKG0 1096 aaKnown RBP27.58■■■□□ 2.01
CHRDL2-210ENST00000622063 TOM1L2Q6ZVM7 507 aa27.57■■■□□ 2
CHRDL2-210ENST00000622063 CCDC9Q9Y3X0 531 aaKnown RBP27.57■■■□□ 2
CHRDL2-210ENST00000622063 EIF4A2Q14240 407 aaKnown RBP27.56■■■□□ 2
CHRDL2-210ENST00000622063 NRAPQ86VF7 1730 aa27.56■■■□□ 2
CHRDL2-210ENST00000622063 TRPC5Q9UL62 973 aaPredicted RBP27.56■■■□□ 2
CHRDL2-210ENST00000622063 VPS72Q15906 364 aa27.56■■■□□ 2
CHRDL2-210ENST00000622063 QTRT2Q9H974 415 aaKnown RBP27.56■■■□□ 2
CHRDL2-210ENST00000622063 DIAPH1O60610 1272 aaKnown RBP27.55■■■□□ 2
CHRDL2-210ENST00000622063 NLRP2Q9NX02 1062 aa27.55■■■□□ 2
CHRDL2-210ENST00000622063 HNRNPUQ00839 825 aaKnown RBP eCLIP27.53■■■□□ 2
CHRDL2-210ENST00000622063 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.53■■■□□ 2
CHRDL2-210ENST00000622063 RGS17Q9UGC6 210 aaPredicted RBP27.52■■■□□ 2
CHRDL2-210ENST00000622063 CRB1P82279 1406 aa27.52■■■□□ 2
CHRDL2-210ENST00000622063 IL13P35225 146 aa27.52■■■□□ 2
CHRDL2-210ENST00000622063 USP35Q9P2H5 1018 aa27.52■■■□□ 2
CHRDL2-210ENST00000622063 CARD10Q9BWT7 1032 aa27.51■■□□□ 1.99
CHRDL2-210ENST00000622063 ATRNO75882 1429 aa27.5■■□□□ 1.99
CHRDL2-210ENST00000622063 COL3A1P02461 1466 aaPredicted RBP27.5■■□□□ 1.99
CHRDL2-210ENST00000622063 SPATA31A5Q5VU36 1347 aa27.5■■□□□ 1.99
CHRDL2-210ENST00000622063 SPATA31A7Q8IWB4 1347 aa27.5■■□□□ 1.99
CHRDL2-210ENST00000622063 NBPF6Q5VWK0 638 aa27.49■■□□□ 1.99
CHRDL2-210ENST00000622063 NBPF4Q96M43 638 aa27.49■■□□□ 1.99
CHRDL2-210ENST00000622063 GJD4Q96KN9 370 aaPredicted RBP27.49■■□□□ 1.99
CHRDL2-210ENST00000622063 SPATA31A1Q5TZJ5 1347 aa27.48■■□□□ 1.99
CHRDL2-210ENST00000622063 EYA1Q99502 592 aa27.48■■□□□ 1.99
CHRDL2-210ENST00000622063 NUDCQ9Y266 331 aa27.48■■□□□ 1.99
CHRDL2-210ENST00000622063 U2SURPO15042 1029 aaKnown RBP27.46■■□□□ 1.99
CHRDL2-210ENST00000622063 USHBP1Q8N6Y0 703 aa27.46■■□□□ 1.99
CHRDL2-210ENST00000622063 FAM208AQ9UK61 1670 aaKnown RBP27.45■■□□□ 1.99
CHRDL2-210ENST00000622063 TCP11L2Q8N4U5 519 aa27.45■■□□□ 1.98
CHRDL2-210ENST00000622063 POTEAQ6S8J7 498 aa27.44■■□□□ 1.98
CHRDL2-210ENST00000622063 THRAP3Q9Y2W1 955 aaKnown RBP27.44■■□□□ 1.98
CHRDL2-210ENST00000622063 IGSF1Q8N6C5 1336 aa27.43■■□□□ 1.98
CHRDL2-210ENST00000622063 RBM6P78332 1123 aaKnown RBP27.43■■□□□ 1.98
CHRDL2-210ENST00000622063 RGPD2P0DJD1 1756 aa27.42■■□□□ 1.98
CHRDL2-210ENST00000622063 RXRBP28702 533 aa27.41■■□□□ 1.98
CHRDL2-210ENST00000622063 FAM98CQ17RN3 349 aaKnown RBP27.4■■□□□ 1.98
CHRDL2-210ENST00000622063 SULT6B1Q6IMI4 303 aa27.4■■□□□ 1.98
CHRDL2-210ENST00000622063 U2AF1L5P0DN76 240 aaPredicted RBP27.4■■□□□ 1.98
CHRDL2-210ENST00000622063 U2AF1Q01081 240 aaKnown RBP eCLIP27.4■■□□□ 1.98
CHRDL2-210ENST00000622063 BARGINQ6ZT62 677 aa27.39■■□□□ 1.97
CHRDL2-210ENST00000622063 ADAMTS8Q9UP79 889 aa27.39■■□□□ 1.97
CHRDL2-210ENST00000622063 HMOX1P09601 288 aa27.38■■□□□ 1.97
CHRDL2-210ENST00000622063 ZBED9Q6R2W3 1325 aa27.38■■□□□ 1.97
CHRDL2-210ENST00000622063 GLI3P10071 1580 aa27.38■■□□□ 1.97
CHRDL2-210ENST00000622063 WDR43Q15061 677 aaKnown RBP eCLIP27.37■■□□□ 1.97
CHRDL2-210ENST00000622063 AEBP1Q8IUX7 1158 aa27.37■■□□□ 1.97
CHRDL2-210ENST00000622063 RGPD1P0DJD0 1748 aa27.37■■□□□ 1.97
CHRDL2-210ENST00000622063 NCAPD2Q15021 1401 aa27.37■■□□□ 1.97
CHRDL2-210ENST00000622063 RAPGEF4Q8WZA2 1011 aa27.36■■□□□ 1.97
CHRDL2-210ENST00000622063 IL2RBP14784 551 aa27.36■■□□□ 1.97
CHRDL2-210ENST00000622063 A0A0G2JS52 829 aa27.35■■□□□ 1.97
CHRDL2-210ENST00000622063 MYT1Q01538 1121 aa27.35■■□□□ 1.97
CHRDL2-210ENST00000622063 CDCA7Q9BWT1 371 aaPredicted RBP27.35■■□□□ 1.97
CHRDL2-210ENST00000622063 KDRP35968 1356 aa27.34■■□□□ 1.97
CHRDL2-210ENST00000622063 ONECUT3O60422 494 aaPredicted RBP27.33■■□□□ 1.97
CHRDL2-210ENST00000622063 TATP17735 454 aaPredicted RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms