RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 RUNDC1Q96C34 613 aa24.65■■□□□ 1.54
SEMA6C-210ENST00000621728 ARHGEF10O15013 1369 aa24.64■■□□□ 1.54
SEMA6C-210ENST00000621728 IQSEC2Q5JU85 1478 aa24.63■■□□□ 1.53
SEMA6C-210ENST00000621728 RGPD1P0DJD0 1748 aa24.63■■□□□ 1.53
SEMA6C-210ENST00000621728 ZC3H6P61129 1189 aaKnown RBP24.63■■□□□ 1.53
SEMA6C-210ENST00000621728 PLEKHF1Q96S99 279 aa24.63■■□□□ 1.53
SEMA6C-210ENST00000621728 RRP7AQ9Y3A4 280 aaKnown RBP24.63■■□□□ 1.53
SEMA6C-210ENST00000621728 ARHGEF25Q86VW2 580 aa24.62■■□□□ 1.53
SEMA6C-210ENST00000621728 PIP4K2BP78356 416 aa24.61■■□□□ 1.53
SEMA6C-210ENST00000621728 LTV1Q96GA3 475 aaPredicted RBP24.61■■□□□ 1.53
SEMA6C-210ENST00000621728 RSPH6AQ9H0K4 717 aa24.61■■□□□ 1.53
SEMA6C-210ENST00000621728 TCP11L2Q8N4U5 519 aa24.61■■□□□ 1.53
SEMA6C-210ENST00000621728 RTL1A6NKG5 1358 aa24.6■■□□□ 1.53
SEMA6C-210ENST00000621728 KIF24Q5T7B8 1368 aa24.6■■□□□ 1.53
SEMA6C-210ENST00000621728 AHDC1Q5TGY3 1603 aaPredicted RBP24.6■■□□□ 1.53
SEMA6C-210ENST00000621728 AEBP1Q8IUX7 1158 aa24.6■■□□□ 1.53
SEMA6C-210ENST00000621728 IP6K1Q92551 441 aa24.6■■□□□ 1.53
SEMA6C-210ENST00000621728 PRKAR2BP31323 418 aa24.59■■□□□ 1.53
SEMA6C-210ENST00000621728 NEUROD2Q15784 382 aa24.59■■□□□ 1.53
SEMA6C-210ENST00000621728 RGPD5Q99666 1765 aa24.59■■□□□ 1.53
SEMA6C-210ENST00000621728 ABCA3Q99758 1704 aa24.58■■□□□ 1.53
SEMA6C-210ENST00000621728 FCHSD2O94868 740 aa24.57■■□□□ 1.52
SEMA6C-210ENST00000621728 UBAP1LF5GYI3 381 aa24.57■■□□□ 1.52
SEMA6C-210ENST00000621728 TOM1O60784 492 aa24.57■■□□□ 1.52
SEMA6C-210ENST00000621728 SULT6B1Q6IMI4 303 aa24.56■■□□□ 1.52
SEMA6C-210ENST00000621728 CDCA7LQ96GN5 454 aa24.56■■□□□ 1.52
SEMA6C-210ENST00000621728 RGPD2P0DJD1 1756 aa24.55■■□□□ 1.52
SEMA6C-210ENST00000621728 PHACTR3Q96KR7 559 aa24.55■■□□□ 1.52
SEMA6C-210ENST00000621728 EYA1Q99502 592 aa24.55■■□□□ 1.52
SEMA6C-210ENST00000621728 AXIN2Q9Y2T1 843 aa24.55■■□□□ 1.52
SEMA6C-210ENST00000621728 PHLPP1O60346 1717 aa24.55■■□□□ 1.52
SEMA6C-210ENST00000621728 ZNF521Q96K83 1311 aa24.54■■□□□ 1.52
SEMA6C-210ENST00000621728 MAPK8IP3Q9UPT6 1336 aa24.54■■□□□ 1.52
SEMA6C-210ENST00000621728 CHRNA2Q15822 529 aa24.53■■□□□ 1.52
SEMA6C-210ENST00000621728 COL18A1P39060 1754 aa24.53■■□□□ 1.52
SEMA6C-210ENST00000621728 KIAA0232Q92628 1395 aa24.52■■□□□ 1.52
SEMA6C-210ENST00000621728 CERKQ8TCT0 537 aa24.52■■□□□ 1.52
SEMA6C-210ENST00000621728 IGSF1Q8N6C5 1336 aa24.52■■□□□ 1.52
SEMA6C-210ENST00000621728 COL16A1Q07092 1604 aaPredicted RBP24.51■■□□□ 1.51
SEMA6C-210ENST00000621728 USHBP1Q8N6Y0 703 aa24.51■■□□□ 1.51
SEMA6C-210ENST00000621728 TMPOP42166 694 aaKnown RBP24.51■■□□□ 1.51
SEMA6C-210ENST00000621728 LRRC59Q96AG4 307 aaKnown RBP24.5■■□□□ 1.51
SEMA6C-210ENST00000621728 PNNQ9H307 717 aaKnown RBP24.49■■□□□ 1.51
SEMA6C-210ENST00000621728 HAP1P54257 671 aaPredicted RBP24.49■■□□□ 1.51
SEMA6C-210ENST00000621728 WWC1Q8IX03 1113 aa24.48■■□□□ 1.51
SEMA6C-210ENST00000621728 ANKRD24Q8TF21 1146 aa24.48■■□□□ 1.51
SEMA6C-210ENST00000621728 NBPF6Q5VWK0 638 aa24.47■■□□□ 1.51
SEMA6C-210ENST00000621728 NBPF4Q96M43 638 aa24.47■■□□□ 1.51
SEMA6C-210ENST00000621728 CPDO75976 1380 aa24.47■■□□□ 1.51
SEMA6C-210ENST00000621728 SPINK5Q9NQ38 1064 aaPredicted RBP24.47■■□□□ 1.51
SEMA6C-210ENST00000621728 KDRP35968 1356 aa24.46■■□□□ 1.51
SEMA6C-210ENST00000621728 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
SEMA6C-210ENST00000621728 DLG5Q8TDM6 1919 aa24.46■■□□□ 1.51
SEMA6C-210ENST00000621728 PDE3BQ13370 1112 aa24.45■■□□□ 1.51
SEMA6C-210ENST00000621728 RIPK4P57078 832 aa24.45■■□□□ 1.5
SEMA6C-210ENST00000621728 TRIM35Q9UPQ4 493 aa24.45■■□□□ 1.5
SEMA6C-210ENST00000621728 COL22A1Q8NFW1 1626 aaPredicted RBP24.44■■□□□ 1.5
SEMA6C-210ENST00000621728 NEFMP07197 916 aa24.44■■□□□ 1.5
SEMA6C-210ENST00000621728 GOLGA2Q08379 1002 aa24.43■■□□□ 1.5
SEMA6C-210ENST00000621728 NFE2L2Q16236 605 aa24.43■■□□□ 1.5
SEMA6C-210ENST00000621728 PRDM11Q9NQV5 511 aa24.43■■□□□ 1.5
SEMA6C-210ENST00000621728 NGEFQ8N5V2 710 aa24.43■■□□□ 1.5
SEMA6C-210ENST00000621728 ERBB3P21860 1342 aa24.42■■□□□ 1.5
SEMA6C-210ENST00000621728 CCDC27Q2M243 656 aa24.41■■□□□ 1.5
SEMA6C-210ENST00000621728 LMO7Q8WWI1 1683 aa24.41■■□□□ 1.5
SEMA6C-210ENST00000621728 CAMTA1Q9Y6Y1 1673 aa24.4■■□□□ 1.5
SEMA6C-210ENST00000621728 ABCC6O95255 1503 aa24.4■■□□□ 1.5
SEMA6C-210ENST00000621728 SLFN5Q08AF3 891 aa24.39■■□□□ 1.5
SEMA6C-210ENST00000621728 FAM83GA6ND36 823 aa24.37■■□□□ 1.49
SEMA6C-210ENST00000621728 DUSP27Q5VZP5 1158 aa24.37■■□□□ 1.49
SEMA6C-210ENST00000621728 MTHFSDQ2M296 383 aaKnown RBP24.37■■□□□ 1.49
SEMA6C-210ENST00000621728 NCBP3Q53F19 620 aaKnown RBP24.37■■□□□ 1.49
SEMA6C-210ENST00000621728 THUMPD2Q9BTF0 503 aaKnown RBP24.37■■□□□ 1.49
SEMA6C-210ENST00000621728 NCAPD2Q15021 1401 aa24.36■■□□□ 1.49
SEMA6C-210ENST00000621728 CSB-PGBD3P0DP91 1061 aa24.35■■□□□ 1.49
SEMA6C-210ENST00000621728 NLRP2Q9NX02 1062 aa24.35■■□□□ 1.49
SEMA6C-210ENST00000621728 WDR63Q8IWG1 891 aa24.35■■□□□ 1.49
SEMA6C-210ENST00000621728 TRMT2AQ8IZ69 625 aaKnown RBP24.35■■□□□ 1.49
SEMA6C-210ENST00000621728 SUPT16HQ9Y5B9 1047 aaKnown RBP24.35■■□□□ 1.49
SEMA6C-210ENST00000621728 FAM208AQ9UK61 1670 aaKnown RBP24.35■■□□□ 1.49
SEMA6C-210ENST00000621728 DCTN1Q14203 1278 aa24.33■■□□□ 1.49
SEMA6C-210ENST00000621728 E9PSI1 815 aa24.33■■□□□ 1.49
SEMA6C-210ENST00000621728 COL5A2P05997 1499 aaPredicted RBP24.33■■□□□ 1.48
SEMA6C-210ENST00000621728 NUTM2BA6NNL0 878 aaPredicted RBP24.31■■□□□ 1.48
SEMA6C-210ENST00000621728 NUTM2EB1AL46 878 aaPredicted RBP24.31■■□□□ 1.48
SEMA6C-210ENST00000621728 NUTM2AQ8IVF1 878 aaPredicted RBP24.31■■□□□ 1.48
SEMA6C-210ENST00000621728 ADAMTS2O95450 1211 aa24.29■■□□□ 1.48
SEMA6C-210ENST00000621728 STRN4Q9NRL3 753 aa24.29■■□□□ 1.48
SEMA6C-210ENST00000621728 COL14A1Q05707 1796 aaKnown RBP24.29■■□□□ 1.48
SEMA6C-210ENST00000621728 MCM10Q7L590 875 aa24.29■■□□□ 1.48
SEMA6C-210ENST00000621728 TSR2Q969E8 191 aaKnown RBP24.28■■□□□ 1.48
SEMA6C-210ENST00000621728 WDR17Q8IZU2 1322 aa24.28■■□□□ 1.48
SEMA6C-210ENST00000621728 BTG4Q9NY30 223 aa24.27■■□□□ 1.48
SEMA6C-210ENST00000621728 GAS2L2Q8NHY3 880 aa24.27■■□□□ 1.48
SEMA6C-210ENST00000621728 LARP1Q6PKG0 1096 aaKnown RBP24.26■■□□□ 1.47
SEMA6C-210ENST00000621728 LMOD3Q0VAK6 560 aa24.25■■□□□ 1.47
SEMA6C-210ENST00000621728 MEGF6O75095 1541 aa24.25■■□□□ 1.47
SEMA6C-210ENST00000621728 PLCH1Q4KWH8 1693 aa24.25■■□□□ 1.47
SEMA6C-210ENST00000621728 TOM1L2Q6ZVM7 507 aa24.25■■□□□ 1.47
SEMA6C-210ENST00000621728 LAS1LQ9Y4W2 734 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms