RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 PLCH1Q4KWH8 1693 aa16.75■□□□□ 0.27
TNFAIP3-211ENST00000621150 ATP7BP35670 1465 aa16.75■□□□□ 0.27
TNFAIP3-211ENST00000621150 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
TNFAIP3-211ENST00000621150 TMC1Q8TDI8 760 aa16.74■□□□□ 0.27
TNFAIP3-211ENST00000621150 INSRP06213 1382 aa16.74■□□□□ 0.27
TNFAIP3-211ENST00000621150 CDK19Q9BWU1 502 aa16.74■□□□□ 0.27
TNFAIP3-211ENST00000621150 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
TNFAIP3-211ENST00000621150 TOPAZ1Q8N9V7 1692 aa16.73■□□□□ 0.27
TNFAIP3-211ENST00000621150 PLEKHG5O94827 1062 aa16.73■□□□□ 0.27
TNFAIP3-211ENST00000621150 PPP2R1AP30153 589 aa16.73■□□□□ 0.27
TNFAIP3-211ENST00000621150 A0A1W2PP64 1363 aa16.73■□□□□ 0.27
TNFAIP3-211ENST00000621150 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
TNFAIP3-211ENST00000621150 HNRNPUQ00839 825 aaKnown RBP eCLIP16.72■□□□□ 0.27
TNFAIP3-211ENST00000621150 CRYBG1Q9Y4K1 1723 aa16.72■□□□□ 0.27
TNFAIP3-211ENST00000621150 UNC5CLQ8IV45 518 aa16.71■□□□□ 0.27
TNFAIP3-211ENST00000621150 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
TNFAIP3-211ENST00000621150 GJD4Q96KN9 370 aaPredicted RBP16.71■□□□□ 0.27
TNFAIP3-211ENST00000621150 GLI3P10071 1580 aa16.71■□□□□ 0.27
TNFAIP3-211ENST00000621150 NGDNQ8NEJ9 315 aaKnown RBP16.7■□□□□ 0.26
TNFAIP3-211ENST00000621150 NSD2O96028 1365 aa16.7■□□□□ 0.26
TNFAIP3-211ENST00000621150 ZBED9Q6R2W3 1325 aa16.69■□□□□ 0.26
TNFAIP3-211ENST00000621150 HS6ST3Q8IZP7 471 aa16.69■□□□□ 0.26
TNFAIP3-211ENST00000621150 BRWD3Q6RI45 1802 aa16.67■□□□□ 0.26
TNFAIP3-211ENST00000621150 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
TNFAIP3-211ENST00000621150 CPSF1Q10570 1443 aaKnown RBP16.67■□□□□ 0.26
TNFAIP3-211ENST00000621150 FAM83GA6ND36 823 aa16.67■□□□□ 0.26
TNFAIP3-211ENST00000621150 PAK3O75914 559 aaPredicted RBP16.67■□□□□ 0.26
TNFAIP3-211ENST00000621150 NRAPQ86VF7 1730 aa16.66■□□□□ 0.26
TNFAIP3-211ENST00000621150 COL14A1Q05707 1796 aaKnown RBP16.65■□□□□ 0.26
TNFAIP3-211ENST00000621150 POLR3AO14802 1390 aaPredicted RBP16.65■□□□□ 0.26
TNFAIP3-211ENST00000621150 BLMP54132 1417 aaPredicted RBP16.65■□□□□ 0.26
TNFAIP3-211ENST00000621150 CABP1Q9NZU7 370 aa16.65■□□□□ 0.26
TNFAIP3-211ENST00000621150 CCDC61Q9Y6R9 512 aa16.65■□□□□ 0.26
TNFAIP3-211ENST00000621150 VPS72Q15906 364 aa16.64■□□□□ 0.25
TNFAIP3-211ENST00000621150 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
TNFAIP3-211ENST00000621150 ACEP12821 1306 aa16.64■□□□□ 0.25
TNFAIP3-211ENST00000621150 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
TNFAIP3-211ENST00000621150 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
TNFAIP3-211ENST00000621150 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
TNFAIP3-211ENST00000621150 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
TNFAIP3-211ENST00000621150 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
TNFAIP3-211ENST00000621150 ANKRD26Q9UPS8 1709 aa16.62■□□□□ 0.25
TNFAIP3-211ENST00000621150 BTG4Q9NY30 223 aa16.61■□□□□ 0.25
TNFAIP3-211ENST00000621150 HDGFL2Q7Z4V5 671 aaPredicted RBP16.6■□□□□ 0.25
TNFAIP3-211ENST00000621150 FYB1O15117 783 aa16.59■□□□□ 0.25
TNFAIP3-211ENST00000621150 ONECUT3O60422 494 aaPredicted RBP16.59■□□□□ 0.25
TNFAIP3-211ENST00000621150 MORC1Q86VD1 984 aa16.59■□□□□ 0.25
TNFAIP3-211ENST00000621150 CCDC9Q9Y3X0 531 aaKnown RBP16.59■□□□□ 0.25
TNFAIP3-211ENST00000621150 MON2Q7Z3U7 1717 aa16.59■□□□□ 0.25
TNFAIP3-211ENST00000621150 CIZ1Q9ULV3 898 aaPredicted RBP16.59■□□□□ 0.25
TNFAIP3-211ENST00000621150 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
TNFAIP3-211ENST00000621150 EDC4Q6P2E9 1401 aaKnown RBP16.58■□□□□ 0.25
TNFAIP3-211ENST00000621150 AKAP12Q02952 1782 aa16.58■□□□□ 0.24
TNFAIP3-211ENST00000621150 NUTM2GQ5VZR2 741 aa16.58■□□□□ 0.24
TNFAIP3-211ENST00000621150 SEPT12Q8IYM1 358 aa16.58■□□□□ 0.24
TNFAIP3-211ENST00000621150 KIF20BQ96Q89 1820 aa16.57■□□□□ 0.24
TNFAIP3-211ENST00000621150 PRDM11Q9NQV5 511 aa16.56■□□□□ 0.24
TNFAIP3-211ENST00000621150 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
TNFAIP3-211ENST00000621150 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
TNFAIP3-211ENST00000621150 NRKQ7Z2Y5 1582 aa16.56■□□□□ 0.24
TNFAIP3-211ENST00000621150 ABTB2Q8N961 1025 aa16.56■□□□□ 0.24
TNFAIP3-211ENST00000621150 CCDC125Q86Z20 511 aa16.55■□□□□ 0.24
TNFAIP3-211ENST00000621150 ZC3H6P61129 1189 aaKnown RBP16.54■□□□□ 0.24
TNFAIP3-211ENST00000621150 GGNBP2Q9H3C7 697 aa16.54■□□□□ 0.24
TNFAIP3-211ENST00000621150 SSH2Q76I76 1423 aa16.53■□□□□ 0.24
TNFAIP3-211ENST00000621150 CHRNA2Q15822 529 aa16.53■□□□□ 0.24
TNFAIP3-211ENST00000621150 FAM98CQ17RN3 349 aaKnown RBP16.53■□□□□ 0.24
TNFAIP3-211ENST00000621150 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
TNFAIP3-211ENST00000621150 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
TNFAIP3-211ENST00000621150 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
TNFAIP3-211ENST00000621150 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
TNFAIP3-211ENST00000621150 COL3A1P02461 1466 aaPredicted RBP16.52■□□□□ 0.24
TNFAIP3-211ENST00000621150 USP19O94966 1318 aa16.52■□□□□ 0.24
TNFAIP3-211ENST00000621150 USP6P35125 1406 aa16.52■□□□□ 0.23
TNFAIP3-211ENST00000621150 NKX1-1Q15270 411 aaPredicted RBP16.52■□□□□ 0.23
TNFAIP3-211ENST00000621150 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.23
TNFAIP3-211ENST00000621150 LMO7Q8WWI1 1683 aa16.51■□□□□ 0.23
TNFAIP3-211ENST00000621150 THSD7AQ9UPZ6 1657 aa16.51■□□□□ 0.23
TNFAIP3-211ENST00000621150 MTHFSP49914 203 aa16.51■□□□□ 0.23
TNFAIP3-211ENST00000621150 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
TNFAIP3-211ENST00000621150 A0A0G2JS52 829 aa16.5■□□□□ 0.23
TNFAIP3-211ENST00000621150 MYT1Q01538 1121 aa16.5■□□□□ 0.23
TNFAIP3-211ENST00000621150 POLA2Q14181 598 aa16.5■□□□□ 0.23
TNFAIP3-211ENST00000621150 CAMTA1Q9Y6Y1 1673 aa16.5■□□□□ 0.23
TNFAIP3-211ENST00000621150 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
TNFAIP3-211ENST00000621150 CPDO75976 1380 aa16.49■□□□□ 0.23
TNFAIP3-211ENST00000621150 GCP02774 474 aa16.48■□□□□ 0.23
TNFAIP3-211ENST00000621150 TNNT2P45379 298 aaPredicted RBP16.48■□□□□ 0.23
TNFAIP3-211ENST00000621150 STRN4Q9NRL3 753 aa16.48■□□□□ 0.23
TNFAIP3-211ENST00000621150 SPATA31A1Q5TZJ5 1347 aa16.48■□□□□ 0.23
TNFAIP3-211ENST00000621150 GTPBP6O43824 516 aaPredicted RBP16.48■□□□□ 0.23
TNFAIP3-211ENST00000621150 AATKQ6ZMQ8 1374 aa16.47■□□□□ 0.23
TNFAIP3-211ENST00000621150 ZNF521Q96K83 1311 aa16.47■□□□□ 0.23
TNFAIP3-211ENST00000621150 SLIT3O75094 1523 aa16.47■□□□□ 0.23
TNFAIP3-211ENST00000621150 NLRP6P59044 892 aa16.46■□□□□ 0.23
TNFAIP3-211ENST00000621150 NME9Q86XW9 330 aa16.46■□□□□ 0.23
TNFAIP3-211ENST00000621150 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.46■□□□□ 0.23
TNFAIP3-211ENST00000621150 NUDCQ9Y266 331 aa16.46■□□□□ 0.23
TNFAIP3-211ENST00000621150 TTC21BQ7Z4L5 1316 aa16.46■□□□□ 0.23
TNFAIP3-211ENST00000621150 OVOS2A0A0J9YW53 1432 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms