RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 CHD4Q14839 1912 aa9.72□□□□□ -0.85
PSMB3-212ENST00000620309 CABP1Q9NZU7 370 aa9.72□□□□□ -0.85
PSMB3-212ENST00000620309 TTC21AQ8NDW8 1320 aa9.72□□□□□ -0.85
PSMB3-212ENST00000620309 FAM208AQ9UK61 1670 aaKnown RBP9.71□□□□□ -0.85
PSMB3-212ENST00000620309 CASZ1Q86V15 1759 aa9.71□□□□□ -0.85
PSMB3-212ENST00000620309 PER1O15534 1290 aaPredicted RBP9.71□□□□□ -0.86
PSMB3-212ENST00000620309 DDX10Q13206 875 aaKnown RBP9.71□□□□□ -0.86
PSMB3-212ENST00000620309 ABTB2Q8N961 1025 aa9.71□□□□□ -0.86
PSMB3-212ENST00000620309 CARD14Q9BXL6 1004 aa9.71□□□□□ -0.86
PSMB3-212ENST00000620309 NLRP13Q86W25 1043 aa9.7□□□□□ -0.86
PSMB3-212ENST00000620309 ZNF784Q8NCA9 323 aaPredicted RBP9.7□□□□□ -0.86
PSMB3-212ENST00000620309 PANK3Q9H999 370 aa9.7□□□□□ -0.86
PSMB3-212ENST00000620309 SMG6Q86US8 1419 aaKnown RBP9.7□□□□□ -0.86
PSMB3-212ENST00000620309 ABCC6O95255 1503 aa9.7□□□□□ -0.86
PSMB3-212ENST00000620309 FAM83GA6ND36 823 aa9.69□□□□□ -0.86
PSMB3-212ENST00000620309 RGPD3A6NKT7 1758 aaPredicted RBP9.69□□□□□ -0.86
PSMB3-212ENST00000620309 PLEKHG5O94827 1062 aa9.69□□□□□ -0.86
PSMB3-212ENST00000620309 FAM98CQ17RN3 349 aaKnown RBP9.69□□□□□ -0.86
PSMB3-212ENST00000620309 AMER1Q5JTC6 1135 aaPredicted RBP9.69□□□□□ -0.86
PSMB3-212ENST00000620309 FAM182BQ5T319 152 aa9.69□□□□□ -0.86
PSMB3-212ENST00000620309 RGPD4Q7Z3J3 1758 aa9.69□□□□□ -0.86
PSMB3-212ENST00000620309 LMO7Q8WWI1 1683 aa9.69□□□□□ -0.86
PSMB3-212ENST00000620309 RGPD5Q99666 1765 aa9.69□□□□□ -0.86
PSMB3-212ENST00000620309 WNK3Q9BYP7 1800 aa9.68□□□□□ -0.86
PSMB3-212ENST00000620309 COL18A1P39060 1754 aa9.68□□□□□ -0.86
PSMB3-212ENST00000620309 USP31Q70CQ4 1352 aa9.68□□□□□ -0.86
PSMB3-212ENST00000620309 SPATA31A5Q5VU36 1347 aa9.68□□□□□ -0.86
PSMB3-212ENST00000620309 SPATA31A7Q8IWB4 1347 aa9.68□□□□□ -0.86
PSMB3-212ENST00000620309 CABLES1Q8TDN4 633 aa9.68□□□□□ -0.86
PSMB3-212ENST00000620309 CGNL1Q0VF96 1302 aa9.67□□□□□ -0.86
PSMB3-212ENST00000620309 TTC21BQ7Z4L5 1316 aa9.67□□□□□ -0.86
PSMB3-212ENST00000620309 KCNH5Q8NCM2 988 aa9.67□□□□□ -0.86
PSMB3-212ENST00000620309 COL3A1P02461 1466 aaPredicted RBP9.66□□□□□ -0.86
PSMB3-212ENST00000620309 SENP3-EIF4A1A0A087X0R7 540 aa9.66□□□□□ -0.86
PSMB3-212ENST00000620309 NLRP6P59044 892 aa9.66□□□□□ -0.86
PSMB3-212ENST00000620309 C1QTNF8P60827 252 aa9.66□□□□□ -0.86
PSMB3-212ENST00000620309 PRDM11Q9NQV5 511 aa9.66□□□□□ -0.86
PSMB3-212ENST00000620309 USP19O94966 1318 aa9.65□□□□□ -0.86
PSMB3-212ENST00000620309 KCNQ2O43526 872 aa9.65□□□□□ -0.86
PSMB3-212ENST00000620309 NUTM2GQ5VZR2 741 aa9.65□□□□□ -0.86
PSMB3-212ENST00000620309 DIEXFQ68CQ4 756 aaKnown RBP9.65□□□□□ -0.86
PSMB3-212ENST00000620309 SPON1Q9HCB6 807 aa9.65□□□□□ -0.86
PSMB3-212ENST00000620309 CCDC9Q9Y3X0 531 aaKnown RBP9.65□□□□□ -0.86
PSMB3-212ENST00000620309 KNSTRNQ9Y448 316 aa9.65□□□□□ -0.86
PSMB3-212ENST00000620309 GOLGB1Q14789 3259 aaKnown RBP9.65□□□□□ -0.87
PSMB3-212ENST00000620309 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.87
PSMB3-212ENST00000620309 NME9Q86XW9 330 aa9.64□□□□□ -0.87
PSMB3-212ENST00000620309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.64□□□□□ -0.87
PSMB3-212ENST00000620309 BTG4Q9NY30 223 aa9.64□□□□□ -0.87
PSMB3-212ENST00000620309 CPDO75976 1380 aa9.63□□□□□ -0.87
PSMB3-212ENST00000620309 KIAA0232Q92628 1395 aa9.63□□□□□ -0.87
PSMB3-212ENST00000620309 FYB1O15117 783 aa9.63□□□□□ -0.87
PSMB3-212ENST00000620309 TRIM37O94972 964 aa9.63□□□□□ -0.87
PSMB3-212ENST00000620309 FAM196AQ6ZSG2 479 aa9.63□□□□□ -0.87
PSMB3-212ENST00000620309 COG3Q96JB2 828 aa9.63□□□□□ -0.87
PSMB3-212ENST00000620309 SBF2Q86WG5 1849 aa9.63□□□□□ -0.87
PSMB3-212ENST00000620309 AATKQ6ZMQ8 1374 aa9.63□□□□□ -0.87
PSMB3-212ENST00000620309 A0A0G2JS52 829 aa9.62□□□□□ -0.87
PSMB3-212ENST00000620309 ZBTB7CA1YPR0 619 aa9.62□□□□□ -0.87
PSMB3-212ENST00000620309 APBA3O96018 575 aa9.62□□□□□ -0.87
PSMB3-212ENST00000620309 MYT1Q01538 1121 aa9.62□□□□□ -0.87
PSMB3-212ENST00000620309 PRKRIP1Q9H875 184 aaPredicted RBP9.62□□□□□ -0.87
PSMB3-212ENST00000620309 SPATA31A1Q5TZJ5 1347 aa9.61□□□□□ -0.87
PSMB3-212ENST00000620309 GCP02774 474 aa9.61□□□□□ -0.87
PSMB3-212ENST00000620309 EVA1CP58658 441 aa9.61□□□□□ -0.87
PSMB3-212ENST00000620309 ZC3H6P61129 1189 aaKnown RBP9.61□□□□□ -0.87
PSMB3-212ENST00000620309 CC2D1BQ5T0F9 858 aaKnown RBP9.61□□□□□ -0.87
PSMB3-212ENST00000620309 GGNBP2Q9H3C7 697 aa9.61□□□□□ -0.87
PSMB3-212ENST00000620309 PARP4Q9UKK3 1724 aaKnown RBP9.61□□□□□ -0.87
PSMB3-212ENST00000620309 RTL1A6NKG5 1358 aa9.61□□□□□ -0.87
PSMB3-212ENST00000620309 DCAF8L1A6NGE4 600 aa9.6□□□□□ -0.87
PSMB3-212ENST00000620309 PPP1R1BQ9UD71 204 aaPredicted RBP9.6□□□□□ -0.87
PSMB3-212ENST00000620309 VIRMAQ69YN4 1812 aaKnown RBP9.6□□□□□ -0.87
PSMB3-212ENST00000620309 COL5A2P05997 1499 aaPredicted RBP9.59□□□□□ -0.87
PSMB3-212ENST00000620309 MYBBP1AQ9BQG0 1328 aaKnown RBP9.59□□□□□ -0.87
PSMB3-212ENST00000620309 SOX12O15370 315 aa9.59□□□□□ -0.87
PSMB3-212ENST00000620309 PTGER2P43116 358 aa9.59□□□□□ -0.87
PSMB3-212ENST00000620309 RALBP1Q15311 655 aa9.59□□□□□ -0.87
PSMB3-212ENST00000620309 NBPF14Q5TI25 921 aa9.59□□□□□ -0.87
PSMB3-212ENST00000620309 KIF24Q5T7B8 1368 aa9.59□□□□□ -0.87
PSMB3-212ENST00000620309 ANP32CO43423 234 aa9.58□□□□□ -0.88
PSMB3-212ENST00000620309 CSB-PGBD3P0DP91 1061 aa9.58□□□□□ -0.88
PSMB3-212ENST00000620309 STRN4Q9NRL3 753 aa9.58□□□□□ -0.88
PSMB3-212ENST00000620309 SHANK3Q9BYB0 1731 aa9.58□□□□□ -0.88
PSMB3-212ENST00000620309 CRB1P82279 1406 aa9.57□□□□□ -0.88
PSMB3-212ENST00000620309 CHRNA2Q15822 529 aa9.57□□□□□ -0.88
PSMB3-212ENST00000620309 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
PSMB3-212ENST00000620309 LRRC37A3O60309 1634 aa9.56□□□□□ -0.88
PSMB3-212ENST00000620309 PKD1L3Q7Z443 1732 aa9.56□□□□□ -0.88
PSMB3-212ENST00000620309 DLG5Q8TDM6 1919 aa9.56□□□□□ -0.88
PSMB3-212ENST00000620309 INSRP06213 1382 aa9.56□□□□□ -0.88
PSMB3-212ENST00000620309 FLT4P35916 1363 aa9.56□□□□□ -0.88
PSMB3-212ENST00000620309 PPP2R1AP30153 589 aa9.56□□□□□ -0.88
PSMB3-212ENST00000620309 BARGINQ6ZT62 677 aa9.56□□□□□ -0.88
PSMB3-212ENST00000620309 MORC1Q86VD1 984 aa9.56□□□□□ -0.88
PSMB3-212ENST00000620309 PDGFDQ9GZP0 370 aaPredicted RBP9.56□□□□□ -0.88
PSMB3-212ENST00000620309 THRAP3Q9Y2W1 955 aaKnown RBP9.56□□□□□ -0.88
PSMB3-212ENST00000620309 NCAPD2Q15021 1401 aa9.56□□□□□ -0.88
PSMB3-212ENST00000620309 AMPHP49418 695 aa9.55□□□□□ -0.88
PSMB3-212ENST00000620309 TOM1L2Q6ZVM7 507 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms