RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 MAN1A2O60476 641 aa3.9□□□□□ -1.79
CEP290-208ENST00000604024 FOXK2Q01167 660 aa3.9□□□□□ -1.79
CEP290-208ENST00000604024 PPP2R2DQ66LE6 453 aa3.9□□□□□ -1.79
CEP290-208ENST00000604024 LINC00528Q8N1L1 170 aa3.9□□□□□ -1.79
CEP290-208ENST00000604024 TMEM151AQ8N4L1 468 aa3.9□□□□□ -1.79
CEP290-208ENST00000604024 KANK3Q6NY19 840 aa3.89□□□□□ -1.79
CEP290-208ENST00000604024 CCDC116Q8IYX3 515 aa3.89□□□□□ -1.79
CEP290-208ENST00000604024 PCDHB15Q9Y5E8 787 aa3.89□□□□□ -1.79
CEP290-208ENST00000604024 SPINT1O43278 529 aa3.89□□□□□ -1.79
CEP290-208ENST00000604024 MYSM1Q5VVJ2 828 aa3.89□□□□□ -1.79
CEP290-208ENST00000604024 SLC35F4A4IF30 521 aa3.88□□□□□ -1.79
CEP290-208ENST00000604024 BMP2P12643 396 aa3.88□□□□□ -1.79
CEP290-208ENST00000604024 PTK2Q05397 1052 aa3.88□□□□□ -1.79
CEP290-208ENST00000604024 C4orf48Q5BLP8 95 aa3.88□□□□□ -1.79
CEP290-208ENST00000604024 VASH1Q7L8A9 365 aaPredicted RBP3.88□□□□□ -1.79
CEP290-208ENST00000604024 NUTM2BA6NNL0 878 aaPredicted RBP3.88□□□□□ -1.79
CEP290-208ENST00000604024 NUTM2EB1AL46 878 aaPredicted RBP3.88□□□□□ -1.79
CEP290-208ENST00000604024 NUTM2DQ5VT03 806 aaPredicted RBP3.88□□□□□ -1.79
CEP290-208ENST00000604024 NUTM2AQ8IVF1 878 aaPredicted RBP3.88□□□□□ -1.79
CEP290-208ENST00000604024 ZNF592Q92610 1267 aa3.88□□□□□ -1.79
CEP290-208ENST00000604024 SLURP2P0DP57 97 aa3.87□□□□□ -1.79
CEP290-208ENST00000604024 PDE4DQ08499 809 aa3.87□□□□□ -1.79
CEP290-208ENST00000604024 SV2AQ7L0J3 742 aa3.87□□□□□ -1.79
CEP290-208ENST00000604024 MAP10Q9P2G4 905 aa3.87□□□□□ -1.79
CEP290-208ENST00000604024 NR3C2P08235 984 aa3.87□□□□□ -1.79
CEP290-208ENST00000604024 CLK2P49760 499 aaKnown RBP3.87□□□□□ -1.79
CEP290-208ENST00000604024 AGERQ15109 404 aa3.87□□□□□ -1.79
CEP290-208ENST00000604024 CABLES1Q8TDN4 633 aa3.87□□□□□ -1.79
CEP290-208ENST00000604024 ITPKCQ96DU7 683 aa3.87□□□□□ -1.79
CEP290-208ENST00000604024 ZFAND3Q9H8U3 227 aa3.87□□□□□ -1.79
CEP290-208ENST00000604024 TTLL8A6PVC2 850 aa3.86□□□□□ -1.79
CEP290-208ENST00000604024 SKIV2LQ15477 1246 aaKnown RBP3.86□□□□□ -1.79
CEP290-208ENST00000604024 ARID5BQ14865 1188 aa3.86□□□□□ -1.79
CEP290-208ENST00000604024 SH3D19Q5HYK7 790 aa3.86□□□□□ -1.79
CEP290-208ENST00000604024 ARHGEF15O94989 841 aa3.86□□□□□ -1.79
CEP290-208ENST00000604024 SEPT12Q8IYM1 358 aa3.86□□□□□ -1.79
CEP290-208ENST00000604024 ARHGAP9Q9BRR9 750 aa3.86□□□□□ -1.79
CEP290-208ENST00000604024 LIMD1Q9UGP4 676 aa3.86□□□□□ -1.79
CEP290-208ENST00000604024 FKBPLQ9UIM3 349 aa3.86□□□□□ -1.79
CEP290-208ENST00000604024 GSK3AP49840 483 aa3.85□□□□□ -1.79
CEP290-208ENST00000604024 ERFEQ4G0M1 354 aa3.85□□□□□ -1.79
CEP290-208ENST00000604024 SCARF2Q96GP6 870 aaPredicted RBP3.85□□□□□ -1.79
CEP290-208ENST00000604024 LRRC4BQ9NT99 713 aa3.85□□□□□ -1.79
CEP290-208ENST00000604024 DNMT3AQ9Y6K1 912 aaPredicted RBP3.85□□□□□ -1.79
CEP290-208ENST00000604024 ESPNB1AK53 854 aa3.85□□□□□ -1.79
CEP290-208ENST00000604024 SOCS7O14512 581 aa3.85□□□□□ -1.79
CEP290-208ENST00000604024 GPC1P35052 558 aa3.85□□□□□ -1.79
CEP290-208ENST00000604024 RASSF7Q02833 373 aa3.85□□□□□ -1.79
CEP290-208ENST00000604024 RTL5Q5HYW3 569 aaPredicted RBP3.85□□□□□ -1.79
CEP290-208ENST00000604024 C6orf118Q5T5N4 469 aa3.85□□□□□ -1.79
CEP290-208ENST00000604024 DNMT3LQ9UJW3 386 aa3.85□□□□□ -1.79
CEP290-208ENST00000604024 ADAMTS8Q9UP79 889 aa3.85□□□□□ -1.79
CEP290-208ENST00000604024 VEGFBP49765 207 aa3.84□□□□□ -1.79
CEP290-208ENST00000604024 ALYREFQ86V81 257 aaKnown RBP3.84□□□□□ -1.79
CEP290-208ENST00000604024 CCDC155Q8N6L0 562 aa3.84□□□□□ -1.79
CEP290-208ENST00000604024 PER1O15534 1290 aaPredicted RBP3.84□□□□□ -1.8
CEP290-208ENST00000604024 FSHRP23945 695 aa3.84□□□□□ -1.8
CEP290-208ENST00000604024 PPP1R26Q5T8A7 1209 aaPredicted RBP3.84□□□□□ -1.8
CEP290-208ENST00000604024 ZNF385CQ66K41 422 aaPredicted RBP3.84□□□□□ -1.8
CEP290-208ENST00000604024 SLC10A4Q96EP9 437 aa3.84□□□□□ -1.8
CEP290-208ENST00000604024 KCTD15Q96SI1 283 aaPredicted RBP3.84□□□□□ -1.8
CEP290-208ENST00000604024 GDF11O95390 407 aa3.83□□□□□ -1.8
CEP290-208ENST00000604024 ADH1AP07327 375 aa3.83□□□□□ -1.8
CEP290-208ENST00000604024 PTGIRP43119 386 aa3.83□□□□□ -1.8
CEP290-208ENST00000604024 RNF144AP50876 292 aaPredicted RBP3.83□□□□□ -1.8
CEP290-208ENST00000604024 MARSP56192 900 aaKnown RBP3.83□□□□□ -1.8
CEP290-208ENST00000604024 PTSQ03393 145 aa3.83□□□□□ -1.8
CEP290-208ENST00000604024 WDR44Q5JSH3 913 aa3.83□□□□□ -1.8
CEP290-208ENST00000604024 ENAMQ9NRM1 1142 aa3.83□□□□□ -1.8
CEP290-208ENST00000604024 ZBTB33Q86T24 672 aa3.83□□□□□ -1.8
CEP290-208ENST00000604024 GPR161Q8N6U8 529 aaKnown RBP3.83□□□□□ -1.8
CEP290-208ENST00000604024 DDRGK1Q96HY6 314 aa3.83□□□□□ -1.8
CEP290-208ENST00000604024 PHF20L1A8MW92 1017 aa3.82□□□□□ -1.8
CEP290-208ENST00000604024 ITGA6P23229 1130 aa3.82□□□□□ -1.8
CEP290-208ENST00000604024 SRSF11Q05519 484 aaKnown RBP3.82□□□□□ -1.8
CEP290-208ENST00000604024 COL25A1Q9BXS0 654 aaPredicted RBP3.82□□□□□ -1.8
CEP290-208ENST00000604024 CNTNAP3BQ96NU0 1288 aa3.82□□□□□ -1.8
CEP290-208ENST00000604024 CNTNAP3Q9BZ76 1288 aa3.82□□□□□ -1.8
CEP290-208ENST00000604024 KRT76Q01546 638 aa3.81□□□□□ -1.8
CEP290-208ENST00000604024 NBPF20Q3BBV1 942 aa3.81□□□□□ -1.8
CEP290-208ENST00000604024 FOXR1Q6PIV2 292 aa3.81□□□□□ -1.8
CEP290-208ENST00000604024 KCTD17Q8N5Z5 321 aa3.81□□□□□ -1.8
CEP290-208ENST00000604024 GOPCQ9HD26 462 aa3.81□□□□□ -1.8
CEP290-208ENST00000604024 SOBPA7XYQ1 873 aa3.81□□□□□ -1.8
CEP290-208ENST00000604024 QPCTQ16769 361 aa3.81□□□□□ -1.8
CEP290-208ENST00000604024 TMEM259Q4ZIN3 620 aa3.81□□□□□ -1.8
CEP290-208ENST00000604024 INTS6LQ5JSJ4 861 aaKnown RBP3.81□□□□□ -1.8
CEP290-208ENST00000604024 RNF20Q5VTR2 975 aa3.81□□□□□ -1.8
CEP290-208ENST00000604024 MAP3K10Q02779 954 aa3.8□□□□□ -1.8
CEP290-208ENST00000604024 LBRQ14739 615 aaKnown RBP3.8□□□□□ -1.8
CEP290-208ENST00000604024 TRIM22Q8IYM9 498 aa3.8□□□□□ -1.8
CEP290-208ENST00000604024 RNF217Q8TC41 542 aa3.8□□□□□ -1.8
CEP290-208ENST00000604024 SPATA31C2B4DYI2 1134 aa3.79□□□□□ -1.8
CEP290-208ENST00000604024 H7C1W4 665 aa3.79□□□□□ -1.8
CEP290-208ENST00000604024 VWA5B2Q8N398 1253 aa3.79□□□□□ -1.8
CEP290-208ENST00000604024 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.79□□□□□ -1.8
CEP290-208ENST00000604024 NSFL1CQ9UNZ2 370 aaKnown RBP3.79□□□□□ -1.8
CEP290-208ENST00000604024 CTDSPL2Q05D32 466 aa3.79□□□□□ -1.8
CEP290-208ENST00000604024 LYSMD3Q7Z3D4 306 aa3.79□□□□□ -1.8
CEP290-208ENST00000604024 DZIP3Q86Y13 1208 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms