RNA–Protein interactions for RNA: ENST00000602230.1

BRD4-211, Transcript of bromodomain containing 4, humanhuman

TSL 3

Gene BRD4, Length 751 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-211ENST00000602230 NRAPQ86VF7 1730 aa17.97■□□□□ 0.47
BRD4-211ENST00000602230 COL18A1P39060 1754 aa17.96■□□□□ 0.47
BRD4-211ENST00000602230 FBLN1P23142 703 aa17.96■□□□□ 0.47
BRD4-211ENST00000602230 AMPHP49418 695 aa17.96■□□□□ 0.47
BRD4-211ENST00000602230 AMER1Q5JTC6 1135 aaPredicted RBP17.96■□□□□ 0.47
BRD4-211ENST00000602230 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
BRD4-211ENST00000602230 AXIN2Q9Y2T1 843 aa17.96■□□□□ 0.47
BRD4-211ENST00000602230 ANKRD26Q9UPS8 1709 aa17.95■□□□□ 0.46
BRD4-211ENST00000602230 MAP3K19Q56UN5 1328 aa17.95■□□□□ 0.46
BRD4-211ENST00000602230 ABCC6O95255 1503 aa17.94■□□□□ 0.46
BRD4-211ENST00000602230 RRS1Q15050 365 aaKnown RBP17.94■□□□□ 0.46
BRD4-211ENST00000602230 IP6K1Q92551 441 aa17.94■□□□□ 0.46
BRD4-211ENST00000602230 RGPD5Q99666 1765 aa17.94■□□□□ 0.46
BRD4-211ENST00000602230 LARP1Q6PKG0 1096 aaKnown RBP17.93■□□□□ 0.46
BRD4-211ENST00000602230 COL5A2P05997 1499 aaPredicted RBP17.93■□□□□ 0.46
BRD4-211ENST00000602230 SPATA31A5Q5VU36 1347 aa17.93■□□□□ 0.46
BRD4-211ENST00000602230 SPATA31A7Q8IWB4 1347 aa17.93■□□□□ 0.46
BRD4-211ENST00000602230 CSB-PGBD3P0DP91 1061 aa17.92■□□□□ 0.46
BRD4-211ENST00000602230 TNNT2P45379 298 aaPredicted RBP17.92■□□□□ 0.46
BRD4-211ENST00000602230 NPC1L1Q9UHC9 1359 aa17.91■□□□□ 0.46
BRD4-211ENST00000602230 MAP2P11137 1827 aaKnown RBP17.91■□□□□ 0.46
BRD4-211ENST00000602230 HOXC9P31274 260 aa17.91■□□□□ 0.46
BRD4-211ENST00000602230 CC2D1BQ5T0F9 858 aaKnown RBP17.91■□□□□ 0.46
BRD4-211ENST00000602230 TOM1L2Q6ZVM7 507 aa17.91■□□□□ 0.46
BRD4-211ENST00000602230 SPATA31A1Q5TZJ5 1347 aa17.91■□□□□ 0.46
BRD4-211ENST00000602230 RTL1A6NKG5 1358 aa17.91■□□□□ 0.46
BRD4-211ENST00000602230 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
BRD4-211ENST00000602230 BLMP54132 1417 aaPredicted RBP17.9■□□□□ 0.46
BRD4-211ENST00000602230 CDK12Q9NYV4 1490 aaPredicted RBP17.9■□□□□ 0.46
BRD4-211ENST00000602230 ZNF316A6NFI3 1004 aaPredicted RBP17.9■□□□□ 0.46
BRD4-211ENST00000602230 DDX10Q13206 875 aaKnown RBP17.9■□□□□ 0.46
BRD4-211ENST00000602230 WDR17Q8IZU2 1322 aa17.9■□□□□ 0.46
BRD4-211ENST00000602230 GLI3P10071 1580 aa17.89■□□□□ 0.45
BRD4-211ENST00000602230 PPM1GO15355 546 aaPredicted RBP17.89■□□□□ 0.45
BRD4-211ENST00000602230 ANKRD24Q8TF21 1146 aa17.89■□□□□ 0.45
BRD4-211ENST00000602230 USP35Q9P2H5 1018 aa17.89■□□□□ 0.45
BRD4-211ENST00000602230 CRB1P82279 1406 aa17.89■□□□□ 0.45
BRD4-211ENST00000602230 TCP11L2Q8N4U5 519 aa17.88■□□□□ 0.45
BRD4-211ENST00000602230 POLKQ9UBT6 870 aa17.88■□□□□ 0.45
BRD4-211ENST00000602230 THRAP3Q9Y2W1 955 aaKnown RBP17.88■□□□□ 0.45
BRD4-211ENST00000602230 EMILIN1Q9Y6C2 1016 aa17.88■□□□□ 0.45
BRD4-211ENST00000602230 ERBB3P21860 1342 aa17.88■□□□□ 0.45
BRD4-211ENST00000602230 FLT4P35916 1363 aa17.88■□□□□ 0.45
BRD4-211ENST00000602230 ONECUT3O60422 494 aaPredicted RBP17.87■□□□□ 0.45
BRD4-211ENST00000602230 CNGB1Q14028 1251 aaPredicted RBP17.87■□□□□ 0.45
BRD4-211ENST00000602230 FAM98CQ17RN3 349 aaKnown RBP17.87■□□□□ 0.45
BRD4-211ENST00000602230 LTV1Q96GA3 475 aaPredicted RBP17.87■□□□□ 0.45
BRD4-211ENST00000602230 HSP90AB2PQ58FF8 381 aa17.86■□□□□ 0.45
BRD4-211ENST00000602230 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
BRD4-211ENST00000602230 A0A0G2JS52 829 aa17.85■□□□□ 0.45
BRD4-211ENST00000602230 INSRP06213 1382 aa17.85■□□□□ 0.45
BRD4-211ENST00000602230 MYT1Q01538 1121 aa17.85■□□□□ 0.45
BRD4-211ENST00000602230 BARGINQ6ZT62 677 aa17.85■□□□□ 0.45
BRD4-211ENST00000602230 NLRP2Q9NX02 1062 aa17.85■□□□□ 0.45
BRD4-211ENST00000602230 RGS12O14924 1447 aa17.84■□□□□ 0.45
BRD4-211ENST00000602230 SMG6Q86US8 1419 aaKnown RBP17.84■□□□□ 0.45
BRD4-211ENST00000602230 SEPT12Q8IYM1 358 aa17.84■□□□□ 0.45
BRD4-211ENST00000602230 PEAK1Q9H792 1746 aa17.84■□□□□ 0.45
BRD4-211ENST00000602230 FAM208AQ9UK61 1670 aaKnown RBP17.81■□□□□ 0.44
BRD4-211ENST00000602230 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
BRD4-211ENST00000602230 MTHFSP49914 203 aa17.8■□□□□ 0.44
BRD4-211ENST00000602230 THSD7AQ9UPZ6 1657 aa17.77■□□□□ 0.44
BRD4-211ENST00000602230 NBPF6Q5VWK0 638 aa17.77■□□□□ 0.44
BRD4-211ENST00000602230 KRT27Q7Z3Y8 459 aa17.77■□□□□ 0.44
BRD4-211ENST00000602230 NBPF4Q96M43 638 aa17.77■□□□□ 0.44
BRD4-211ENST00000602230 BRWD3Q6RI45 1802 aa17.77■□□□□ 0.43
BRD4-211ENST00000602230 RGPD2P0DJD1 1756 aa17.76■□□□□ 0.43
BRD4-211ENST00000602230 IL2RBP14784 551 aa17.76■□□□□ 0.43
BRD4-211ENST00000602230 PDE3BQ13370 1112 aa17.76■□□□□ 0.43
BRD4-211ENST00000602230 EIF4A2Q14240 407 aaKnown RBP17.76■□□□□ 0.43
BRD4-211ENST00000602230 DDB1Q16531 1140 aa17.75■□□□□ 0.43
BRD4-211ENST00000602230 EXOC5O00471 708 aa17.74■□□□□ 0.43
BRD4-211ENST00000602230 PPP2R1AP30153 589 aa17.74■□□□□ 0.43
BRD4-211ENST00000602230 RALBP1Q15311 655 aa17.74■□□□□ 0.43
BRD4-211ENST00000602230 PARP4Q9UKK3 1724 aaKnown RBP17.73■□□□□ 0.43
BRD4-211ENST00000602230 WNK3Q9BYP7 1800 aa17.73■□□□□ 0.43
BRD4-211ENST00000602230 USHBP1Q8N6Y0 703 aa17.73■□□□□ 0.43
BRD4-211ENST00000602230 EYA1Q99502 592 aa17.73■□□□□ 0.43
BRD4-211ENST00000602230 PARD3Q8TEW0 1356 aa17.73■□□□□ 0.43
BRD4-211ENST00000602230 DISP2A7MBM2 1401 aa17.72■□□□□ 0.43
BRD4-211ENST00000602230 RAPGEF4Q8WZA2 1011 aa17.72■□□□□ 0.43
BRD4-211ENST00000602230 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
BRD4-211ENST00000602230 DIAPH1O60610 1272 aaKnown RBP17.71■□□□□ 0.43
BRD4-211ENST00000602230 TATP17735 454 aaPredicted RBP17.7■□□□□ 0.42
BRD4-211ENST00000602230 IL13P35225 146 aa17.7■□□□□ 0.42
BRD4-211ENST00000602230 FAM196AQ6ZSG2 479 aa17.68■□□□□ 0.42
BRD4-211ENST00000602230 LRRC37A3O60309 1634 aa17.68■□□□□ 0.42
BRD4-211ENST00000602230 IGSF1Q8N6C5 1336 aa17.68■□□□□ 0.42
BRD4-211ENST00000602230 NCAPD2Q15021 1401 aa17.67■□□□□ 0.42
BRD4-211ENST00000602230 FAM182BQ5T319 152 aa17.67■□□□□ 0.42
BRD4-211ENST00000602230 ZCRB1Q8TBF4 217 aaKnown RBP17.67■□□□□ 0.42
BRD4-211ENST00000602230 TNS2Q63HR2 1409 aa17.66■□□□□ 0.42
BRD4-211ENST00000602230 PRKRIP1Q9H875 184 aaPredicted RBP17.66■□□□□ 0.42
BRD4-211ENST00000602230 MARCH10Q8NA82 808 aaPredicted RBP17.65■□□□□ 0.42
BRD4-211ENST00000602230 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
BRD4-211ENST00000602230 NUDCQ9Y266 331 aa17.65■□□□□ 0.42
BRD4-211ENST00000602230 MEGF6O75095 1541 aa17.65■□□□□ 0.42
BRD4-211ENST00000602230 MYBBP1AQ9BQG0 1328 aaKnown RBP17.65■□□□□ 0.42
BRD4-211ENST00000602230 OVOS2A0A0G2JMS6 1433 aa17.64■□□□□ 0.42
BRD4-211ENST00000602230 SULT6B1Q6IMI4 303 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms