RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 LTN1O94822 1766 aa23.25■■□□□ 1.31
DDX49-213ENST00000602113 IP6K1Q92551 441 aa23.23■■□□□ 1.31
DDX49-213ENST00000602113 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
DDX49-213ENST00000602113 ZC3H6P61129 1189 aaKnown RBP23.22■■□□□ 1.31
DDX49-213ENST00000602113 LRRC59Q96AG4 307 aaKnown RBP23.22■■□□□ 1.31
DDX49-213ENST00000602113 ZBED9Q6R2W3 1325 aa23.2■■□□□ 1.31
DDX49-213ENST00000602113 COL16A1Q07092 1604 aaPredicted RBP23.2■■□□□ 1.3
DDX49-213ENST00000602113 PHLPP1O60346 1717 aa23.2■■□□□ 1.3
DDX49-213ENST00000602113 RUNDC1Q96C34 613 aa23.19■■□□□ 1.3
DDX49-213ENST00000602113 CENPBP07199 599 aaPredicted RBP23.18■■□□□ 1.3
DDX49-213ENST00000602113 RGPD1P0DJD0 1748 aa23.17■■□□□ 1.3
DDX49-213ENST00000602113 ABCA3Q99758 1704 aa23.17■■□□□ 1.3
DDX49-213ENST00000602113 CPDO75976 1380 aa23.17■■□□□ 1.3
DDX49-213ENST00000602113 HMOX1P09601 288 aa23.17■■□□□ 1.3
DDX49-213ENST00000602113 PLEKHF1Q96S99 279 aa23.17■■□□□ 1.3
DDX49-213ENST00000602113 RSPH6AQ9H0K4 717 aa23.17■■□□□ 1.3
DDX49-213ENST00000602113 APAF1O14727 1248 aa23.16■■□□□ 1.3
DDX49-213ENST00000602113 FCHSD2O94868 740 aa23.16■■□□□ 1.3
DDX49-213ENST00000602113 AXIN2Q9Y2T1 843 aa23.16■■□□□ 1.3
DDX49-213ENST00000602113 KIAA0232Q92628 1395 aa23.16■■□□□ 1.3
DDX49-213ENST00000602113 LTV1Q96GA3 475 aaPredicted RBP23.16■■□□□ 1.3
DDX49-213ENST00000602113 SALL2Q9Y467 1007 aaPredicted RBP23.16■■□□□ 1.3
DDX49-213ENST00000602113 COL22A1Q8NFW1 1626 aaPredicted RBP23.14■■□□□ 1.29
DDX49-213ENST00000602113 COL18A1P39060 1754 aa23.13■■□□□ 1.29
DDX49-213ENST00000602113 AEBP1Q8IUX7 1158 aa23.13■■□□□ 1.29
DDX49-213ENST00000602113 EYA1Q99502 592 aa23.13■■□□□ 1.29
DDX49-213ENST00000602113 PRKAR2BP31323 418 aa23.13■■□□□ 1.29
DDX49-213ENST00000602113 HAP1P54257 671 aaPredicted RBP23.13■■□□□ 1.29
DDX49-213ENST00000602113 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
DDX49-213ENST00000602113 TCP11L2Q8N4U5 519 aa23.13■■□□□ 1.29
DDX49-213ENST00000602113 IGSF1Q8N6C5 1336 aa23.12■■□□□ 1.29
DDX49-213ENST00000602113 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
DDX49-213ENST00000602113 PNNQ9H307 717 aaKnown RBP23.11■■□□□ 1.29
DDX49-213ENST00000602113 ANKRD24Q8TF21 1146 aa23.1■■□□□ 1.29
DDX49-213ENST00000602113 ABCC6O95255 1503 aa23.1■■□□□ 1.29
DDX49-213ENST00000602113 KDRP35968 1356 aa23.09■■□□□ 1.29
DDX49-213ENST00000602113 PHACTR3Q96KR7 559 aa23.09■■□□□ 1.29
DDX49-213ENST00000602113 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
DDX49-213ENST00000602113 RRP7AQ9Y3A4 280 aaKnown RBP23.09■■□□□ 1.29
DDX49-213ENST00000602113 RGPD5Q99666 1765 aa23.08■■□□□ 1.29
DDX49-213ENST00000602113 MAPK8IP3Q9UPT6 1336 aa23.08■■□□□ 1.29
DDX49-213ENST00000602113 NBPF6Q5VWK0 638 aa23.07■■□□□ 1.28
DDX49-213ENST00000602113 NBPF4Q96M43 638 aa23.07■■□□□ 1.28
DDX49-213ENST00000602113 ERBB3P21860 1342 aa23.07■■□□□ 1.28
DDX49-213ENST00000602113 ZNF521Q96K83 1311 aa23.06■■□□□ 1.28
DDX49-213ENST00000602113 NGEFQ8N5V2 710 aa23.06■■□□□ 1.28
DDX49-213ENST00000602113 LMO7Q8WWI1 1683 aa23.05■■□□□ 1.28
DDX49-213ENST00000602113 TMPOP42166 694 aaKnown RBP23.05■■□□□ 1.28
DDX49-213ENST00000602113 USHBP1Q8N6Y0 703 aa23.05■■□□□ 1.28
DDX49-213ENST00000602113 FAM83GA6ND36 823 aa23.04■■□□□ 1.28
DDX49-213ENST00000602113 NEUROD2Q15784 382 aa23.04■■□□□ 1.28
DDX49-213ENST00000602113 CAMTA1Q9Y6Y1 1673 aa23.04■■□□□ 1.28
DDX49-213ENST00000602113 RGPD2P0DJD1 1756 aa23.03■■□□□ 1.28
DDX49-213ENST00000602113 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
DDX49-213ENST00000602113 NCAPD2Q15021 1401 aa23.02■■□□□ 1.28
DDX49-213ENST00000602113 NCBP3Q53F19 620 aaKnown RBP23.02■■□□□ 1.28
DDX49-213ENST00000602113 NEFMP07197 916 aa23.01■■□□□ 1.27
DDX49-213ENST00000602113 NFE2L2Q16236 605 aa23■■□□□ 1.27
DDX49-213ENST00000602113 WWC1Q8IX03 1113 aa23■■□□□ 1.27
DDX49-213ENST00000602113 JCADQ9P266 1359 aa23■■□□□ 1.27
DDX49-213ENST00000602113 CCDC27Q2M243 656 aa23■■□□□ 1.27
DDX49-213ENST00000602113 CDCA7LQ96GN5 454 aa23■■□□□ 1.27
DDX49-213ENST00000602113 HSPA1LP34931 641 aa22.99■■□□□ 1.27
DDX49-213ENST00000602113 RIPK4P57078 832 aa22.99■■□□□ 1.27
DDX49-213ENST00000602113 PDE3BQ13370 1112 aa22.99■■□□□ 1.27
DDX49-213ENST00000602113 TRIM35Q9UPQ4 493 aa22.99■■□□□ 1.27
DDX49-213ENST00000602113 COL5A2P05997 1499 aaPredicted RBP22.98■■□□□ 1.27
DDX49-213ENST00000602113 CSB-PGBD3P0DP91 1061 aa22.97■■□□□ 1.27
DDX49-213ENST00000602113 NLRP2Q9NX02 1062 aa22.97■■□□□ 1.27
DDX49-213ENST00000602113 NUTM2BA6NNL0 878 aaPredicted RBP22.97■■□□□ 1.27
DDX49-213ENST00000602113 NUTM2EB1AL46 878 aaPredicted RBP22.97■■□□□ 1.27
DDX49-213ENST00000602113 NUTM2AQ8IVF1 878 aaPredicted RBP22.97■■□□□ 1.27
DDX49-213ENST00000602113 COL14A1Q05707 1796 aaKnown RBP22.96■■□□□ 1.27
DDX49-213ENST00000602113 ADAMTS2O95450 1211 aa22.96■■□□□ 1.27
DDX49-213ENST00000602113 FAM208AQ9UK61 1670 aaKnown RBP22.95■■□□□ 1.26
DDX49-213ENST00000602113 WDR17Q8IZU2 1322 aa22.95■■□□□ 1.26
DDX49-213ENST00000602113 GOLGA2Q08379 1002 aa22.94■■□□□ 1.26
DDX49-213ENST00000602113 MTHFSDQ2M296 383 aaKnown RBP22.94■■□□□ 1.26
DDX49-213ENST00000602113 SPINK5Q9NQ38 1064 aaPredicted RBP22.93■■□□□ 1.26
DDX49-213ENST00000602113 BTG4Q9NY30 223 aa22.93■■□□□ 1.26
DDX49-213ENST00000602113 WDR63Q8IWG1 891 aa22.92■■□□□ 1.26
DDX49-213ENST00000602113 STRN4Q9NRL3 753 aa22.92■■□□□ 1.26
DDX49-213ENST00000602113 SLFN5Q08AF3 891 aa22.91■■□□□ 1.26
DDX49-213ENST00000602113 LARP1Q6PKG0 1096 aaKnown RBP22.91■■□□□ 1.26
DDX49-213ENST00000602113 EVA1CP58658 441 aa22.9■■□□□ 1.26
DDX49-213ENST00000602113 TOM1L2Q6ZVM7 507 aa22.9■■□□□ 1.26
DDX49-213ENST00000602113 DLG5Q8TDM6 1919 aa22.89■■□□□ 1.25
DDX49-213ENST00000602113 TRMT2AQ8IZ69 625 aaKnown RBP22.89■■□□□ 1.25
DDX49-213ENST00000602113 GAS2L2Q8NHY3 880 aa22.89■■□□□ 1.25
DDX49-213ENST00000602113 SPATA31A6Q5VVP1 1343 aa22.88■■□□□ 1.25
DDX49-213ENST00000602113 PLCH1Q4KWH8 1693 aa22.88■■□□□ 1.25
DDX49-213ENST00000602113 DUSP27Q5VZP5 1158 aa22.87■■□□□ 1.25
DDX49-213ENST00000602113 CARD10Q9BWT7 1032 aa22.87■■□□□ 1.25
DDX49-213ENST00000602113 E9PSI1 815 aa22.87■■□□□ 1.25
DDX49-213ENST00000602113 LMOD3Q0VAK6 560 aa22.87■■□□□ 1.25
DDX49-213ENST00000602113 THUMPD2Q9BTF0 503 aaKnown RBP22.87■■□□□ 1.25
DDX49-213ENST00000602113 MEGF6O75095 1541 aa22.87■■□□□ 1.25
DDX49-213ENST00000602113 LRP6O75581 1613 aa22.86■■□□□ 1.25
DDX49-213ENST00000602113 RAPGEF4Q8WZA2 1011 aa22.86■■□□□ 1.25
DDX49-213ENST00000602113 DCTN1Q14203 1278 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms