RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 ZC3H6P61129 1189 aaKnown RBP24.73■■□□□ 1.55
SSBP4-212ENST00000601919 BLMP54132 1417 aaPredicted RBP24.72■■□□□ 1.55
SSBP4-212ENST00000601919 U2SURPO15042 1029 aaKnown RBP24.72■■□□□ 1.55
SSBP4-212ENST00000601919 U2AF1L5P0DN76 240 aaPredicted RBP24.72■■□□□ 1.55
SSBP4-212ENST00000601919 IL13P35225 146 aa24.72■■□□□ 1.55
SSBP4-212ENST00000601919 U2AF1Q01081 240 aaKnown RBP eCLIP24.72■■□□□ 1.55
SSBP4-212ENST00000601919 HSP90AB2PQ58FF8 381 aa24.72■■□□□ 1.55
SSBP4-212ENST00000601919 YTHDC1Q96MU7 727 aaKnown RBP24.72■■□□□ 1.55
SSBP4-212ENST00000601919 PNNQ9H307 717 aaKnown RBP24.71■■□□□ 1.55
SSBP4-212ENST00000601919 EIF4A2Q14240 407 aaKnown RBP24.7■■□□□ 1.54
SSBP4-212ENST00000601919 KIAA0232Q92628 1395 aa24.68■■□□□ 1.54
SSBP4-212ENST00000601919 PRDM11Q9NQV5 511 aa24.68■■□□□ 1.54
SSBP4-212ENST00000601919 JCADQ9P266 1359 aa24.67■■□□□ 1.54
SSBP4-212ENST00000601919 COL18A1P39060 1754 aa24.66■■□□□ 1.54
SSBP4-212ENST00000601919 HNRNPUQ00839 825 aaKnown RBP eCLIP24.65■■□□□ 1.54
SSBP4-212ENST00000601919 FCHSD2O94868 740 aa24.64■■□□□ 1.54
SSBP4-212ENST00000601919 RGPD5Q99666 1765 aa24.64■■□□□ 1.53
SSBP4-212ENST00000601919 RGPD1P0DJD0 1748 aa24.64■■□□□ 1.53
SSBP4-212ENST00000601919 NEFMP07197 916 aa24.63■■□□□ 1.53
SSBP4-212ENST00000601919 RUNDC1Q96C34 613 aa24.62■■□□□ 1.53
SSBP4-212ENST00000601919 LTV1Q96GA3 475 aaPredicted RBP24.62■■□□□ 1.53
SSBP4-212ENST00000601919 CHRNA2Q15822 529 aa24.61■■□□□ 1.53
SSBP4-212ENST00000601919 FAM208AQ9UK61 1670 aaKnown RBP24.61■■□□□ 1.53
SSBP4-212ENST00000601919 COL14A1Q05707 1796 aaKnown RBP24.6■■□□□ 1.53
SSBP4-212ENST00000601919 ANKRD24Q8TF21 1146 aa24.6■■□□□ 1.53
SSBP4-212ENST00000601919 HSPA1LP34931 641 aa24.59■■□□□ 1.53
SSBP4-212ENST00000601919 AXIN2Q9Y2T1 843 aa24.59■■□□□ 1.53
SSBP4-212ENST00000601919 LMO7Q8WWI1 1683 aa24.59■■□□□ 1.53
SSBP4-212ENST00000601919 SPATA31A6Q5VVP1 1343 aa24.59■■□□□ 1.53
SSBP4-212ENST00000601919 IGSF1Q8N6C5 1336 aa24.59■■□□□ 1.53
SSBP4-212ENST00000601919 MAPK8IP3Q9UPT6 1336 aa24.59■■□□□ 1.53
SSBP4-212ENST00000601919 CCDC146Q8IYE0 955 aa24.58■■□□□ 1.53
SSBP4-212ENST00000601919 NGEFQ8N5V2 710 aa24.58■■□□□ 1.53
SSBP4-212ENST00000601919 ERBB3P21860 1342 aa24.58■■□□□ 1.52
SSBP4-212ENST00000601919 SULT6B1Q6IMI4 303 aa24.57■■□□□ 1.52
SSBP4-212ENST00000601919 EYA1Q99502 592 aa24.57■■□□□ 1.52
SSBP4-212ENST00000601919 RSPH6AQ9H0K4 717 aa24.57■■□□□ 1.52
SSBP4-212ENST00000601919 HMOX1P09601 288 aa24.56■■□□□ 1.52
SSBP4-212ENST00000601919 FAM83GA6ND36 823 aa24.55■■□□□ 1.52
SSBP4-212ENST00000601919 CSB-PGBD3P0DP91 1061 aa24.55■■□□□ 1.52
SSBP4-212ENST00000601919 KDRP35968 1356 aa24.54■■□□□ 1.52
SSBP4-212ENST00000601919 NUTM2BA6NNL0 878 aaPredicted RBP24.54■■□□□ 1.52
SSBP4-212ENST00000601919 NUTM2EB1AL46 878 aaPredicted RBP24.54■■□□□ 1.52
SSBP4-212ENST00000601919 PRKAR2BP31323 418 aa24.54■■□□□ 1.52
SSBP4-212ENST00000601919 NUTM2AQ8IVF1 878 aaPredicted RBP24.54■■□□□ 1.52
SSBP4-212ENST00000601919 PLEKHF1Q96S99 279 aa24.54■■□□□ 1.52
SSBP4-212ENST00000601919 ZBED9Q6R2W3 1325 aa24.54■■□□□ 1.52
SSBP4-212ENST00000601919 CAMTA1Q9Y6Y1 1673 aa24.53■■□□□ 1.52
SSBP4-212ENST00000601919 RGPD2P0DJD1 1756 aa24.53■■□□□ 1.52
SSBP4-212ENST00000601919 APAF1O14727 1248 aa24.52■■□□□ 1.52
SSBP4-212ENST00000601919 COL5A2P05997 1499 aaPredicted RBP24.51■■□□□ 1.51
SSBP4-212ENST00000601919 ADAMTS2O95450 1211 aa24.51■■□□□ 1.51
SSBP4-212ENST00000601919 EVA1CP58658 441 aa24.51■■□□□ 1.51
SSBP4-212ENST00000601919 NCBP3Q53F19 620 aaKnown RBP24.51■■□□□ 1.51
SSBP4-212ENST00000601919 NBPF6Q5VWK0 638 aa24.51■■□□□ 1.51
SSBP4-212ENST00000601919 TCP11L2Q8N4U5 519 aa24.51■■□□□ 1.51
SSBP4-212ENST00000601919 NBPF4Q96M43 638 aa24.51■■□□□ 1.51
SSBP4-212ENST00000601919 AEBP1Q8IUX7 1158 aa24.5■■□□□ 1.51
SSBP4-212ENST00000601919 NLRP2Q9NX02 1062 aa24.5■■□□□ 1.51
SSBP4-212ENST00000601919 WDR17Q8IZU2 1322 aa24.5■■□□□ 1.51
SSBP4-212ENST00000601919 NCAPD2Q15021 1401 aa24.49■■□□□ 1.51
SSBP4-212ENST00000601919 PLCH1Q4KWH8 1693 aa24.49■■□□□ 1.51
SSBP4-212ENST00000601919 BTG4Q9NY30 223 aa24.48■■□□□ 1.51
SSBP4-212ENST00000601919 NWD2Q9ULI1 1742 aa24.47■■□□□ 1.51
SSBP4-212ENST00000601919 CENPBP07199 599 aaPredicted RBP24.47■■□□□ 1.51
SSBP4-212ENST00000601919 TOM1L2Q6ZVM7 507 aa24.46■■□□□ 1.51
SSBP4-212ENST00000601919 USHBP1Q8N6Y0 703 aa24.45■■□□□ 1.5
SSBP4-212ENST00000601919 STRN4Q9NRL3 753 aa24.45■■□□□ 1.5
SSBP4-212ENST00000601919 TMPOP42166 694 aaKnown RBP24.44■■□□□ 1.5
SSBP4-212ENST00000601919 FBXO41Q8TF61 875 aa24.44■■□□□ 1.5
SSBP4-212ENST00000601919 PLEKHG2Q9H7P9 1386 aa24.43■■□□□ 1.5
SSBP4-212ENST00000601919 NFE2L2Q16236 605 aa24.43■■□□□ 1.5
SSBP4-212ENST00000601919 CCDC27Q2M243 656 aa24.43■■□□□ 1.5
SSBP4-212ENST00000601919 PHACTR3Q96KR7 559 aa24.43■■□□□ 1.5
SSBP4-212ENST00000601919 CARD10Q9BWT7 1032 aa24.43■■□□□ 1.5
SSBP4-212ENST00000601919 SALL2Q9Y467 1007 aaPredicted RBP24.43■■□□□ 1.5
SSBP4-212ENST00000601919 CRB1P82279 1406 aa24.42■■□□□ 1.5
SSBP4-212ENST00000601919 LMOD3Q0VAK6 560 aa24.41■■□□□ 1.5
SSBP4-212ENST00000601919 PDE3BQ13370 1112 aa24.41■■□□□ 1.5
SSBP4-212ENST00000601919 NEUROD2Q15784 382 aa24.41■■□□□ 1.5
SSBP4-212ENST00000601919 MEX3CQ5U5Q3 659 aaKnown RBP24.41■■□□□ 1.5
SSBP4-212ENST00000601919 GAS2L2Q8NHY3 880 aa24.41■■□□□ 1.5
SSBP4-212ENST00000601919 RAPGEF4Q8WZA2 1011 aa24.41■■□□□ 1.5
SSBP4-212ENST00000601919 NRAPQ86VF7 1730 aa24.41■■□□□ 1.5
SSBP4-212ENST00000601919 SENP3-EIF4A1A0A087X0R7 540 aa24.4■■□□□ 1.5
SSBP4-212ENST00000601919 RIPK4P57078 832 aa24.4■■□□□ 1.5
SSBP4-212ENST00000601919 LARP1Q6PKG0 1096 aaKnown RBP24.4■■□□□ 1.5
SSBP4-212ENST00000601919 NGLY1Q96IV0 654 aa24.4■■□□□ 1.5
SSBP4-212ENST00000601919 RRP7AQ9Y3A4 280 aaKnown RBP24.4■■□□□ 1.5
SSBP4-212ENST00000601919 SLIT2O94813 1529 aa24.4■■□□□ 1.5
SSBP4-212ENST00000601919 LRP6O75581 1613 aa24.39■■□□□ 1.5
SSBP4-212ENST00000601919 AMOTQ4VCS5 1084 aa24.39■■□□□ 1.49
SSBP4-212ENST00000601919 C8orf37Q96NL8 207 aa24.39■■□□□ 1.49
SSBP4-212ENST00000601919 DLG5Q8TDM6 1919 aa24.39■■□□□ 1.49
SSBP4-212ENST00000601919 TATP17735 454 aaPredicted RBP24.38■■□□□ 1.49
SSBP4-212ENST00000601919 PLEKHO1Q53GL0 409 aaPredicted RBP24.38■■□□□ 1.49
SSBP4-212ENST00000601919 PARP4Q9UKK3 1724 aaKnown RBP24.36■■□□□ 1.49
SSBP4-212ENST00000601919 WWC1Q8IX03 1113 aa24.36■■□□□ 1.49
SSBP4-212ENST00000601919 PHF23Q9BUL5 403 aaPredicted RBP24.35■■□□□ 1.49
SSBP4-212ENST00000601919 ZNF521Q96K83 1311 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms