RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 CCDC9Q9Y3X0 531 aaKnown RBP18.94■□□□□ 0.62
SNRPA-208ENST00000600456 COL5A2P05997 1499 aaPredicted RBP18.94■□□□□ 0.62
SNRPA-208ENST00000600456 SPATA31A5Q5VU36 1347 aa18.93■□□□□ 0.62
SNRPA-208ENST00000600456 SPATA31A7Q8IWB4 1347 aa18.93■□□□□ 0.62
SNRPA-208ENST00000600456 AXIN2Q9Y2T1 843 aa18.92■□□□□ 0.62
SNRPA-208ENST00000600456 GLI3P10071 1580 aa18.92■□□□□ 0.62
SNRPA-208ENST00000600456 MAP3K19Q56UN5 1328 aa18.92■□□□□ 0.62
SNRPA-208ENST00000600456 BLMP54132 1417 aaPredicted RBP18.91■□□□□ 0.62
SNRPA-208ENST00000600456 PER1O15534 1290 aaPredicted RBP18.91■□□□□ 0.62
SNRPA-208ENST00000600456 RTL1A6NKG5 1358 aa18.91■□□□□ 0.62
SNRPA-208ENST00000600456 KIF24Q5T7B8 1368 aa18.91■□□□□ 0.62
SNRPA-208ENST00000600456 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
SNRPA-208ENST00000600456 IP6K1Q92551 441 aa18.9■□□□□ 0.62
SNRPA-208ENST00000600456 ANKRD26Q9UPS8 1709 aa18.9■□□□□ 0.62
SNRPA-208ENST00000600456 SPATA31A1Q5TZJ5 1347 aa18.9■□□□□ 0.62
SNRPA-208ENST00000600456 WDR17Q8IZU2 1322 aa18.9■□□□□ 0.62
SNRPA-208ENST00000600456 LTN1O94822 1766 aa18.9■□□□□ 0.62
SNRPA-208ENST00000600456 RGS12O14924 1447 aa18.9■□□□□ 0.62
SNRPA-208ENST00000600456 ONECUT3O60422 494 aaPredicted RBP18.89■□□□□ 0.61
SNRPA-208ENST00000600456 LARP1Q6PKG0 1096 aaKnown RBP18.89■□□□□ 0.61
SNRPA-208ENST00000600456 NPC1L1Q9UHC9 1359 aa18.89■□□□□ 0.61
SNRPA-208ENST00000600456 CRB1P82279 1406 aa18.89■□□□□ 0.61
SNRPA-208ENST00000600456 AMPHP49418 695 aa18.88■□□□□ 0.61
SNRPA-208ENST00000600456 HOXC9P31274 260 aa18.87■□□□□ 0.61
SNRPA-208ENST00000600456 THRAP3Q9Y2W1 955 aaKnown RBP18.87■□□□□ 0.61
SNRPA-208ENST00000600456 ERBB3P21860 1342 aa18.86■□□□□ 0.61
SNRPA-208ENST00000600456 CSB-PGBD3P0DP91 1061 aa18.86■□□□□ 0.61
SNRPA-208ENST00000600456 FBLN1P23142 703 aa18.86■□□□□ 0.61
SNRPA-208ENST00000600456 RRS1Q15050 365 aaKnown RBP18.86■□□□□ 0.61
SNRPA-208ENST00000600456 MORC1Q86VD1 984 aa18.86■□□□□ 0.61
SNRPA-208ENST00000600456 FLT4P35916 1363 aa18.85■□□□□ 0.61
SNRPA-208ENST00000600456 BARGINQ6ZT62 677 aa18.85■□□□□ 0.61
SNRPA-208ENST00000600456 TOM1L2Q6ZVM7 507 aa18.85■□□□□ 0.61
SNRPA-208ENST00000600456 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
SNRPA-208ENST00000600456 FAM98CQ17RN3 349 aaKnown RBP18.84■□□□□ 0.61
SNRPA-208ENST00000600456 ANKRD24Q8TF21 1146 aa18.84■□□□□ 0.61
SNRPA-208ENST00000600456 CARD10Q9BWT7 1032 aa18.84■□□□□ 0.61
SNRPA-208ENST00000600456 SEPT12Q8IYM1 358 aa18.83■□□□□ 0.6
SNRPA-208ENST00000600456 INSRP06213 1382 aa18.82■□□□□ 0.6
SNRPA-208ENST00000600456 USP35Q9P2H5 1018 aa18.82■□□□□ 0.6
SNRPA-208ENST00000600456 POLKQ9UBT6 870 aa18.82■□□□□ 0.6
SNRPA-208ENST00000600456 RGPD5Q99666 1765 aa18.81■□□□□ 0.6
SNRPA-208ENST00000600456 TNNT2P45379 298 aaPredicted RBP18.81■□□□□ 0.6
SNRPA-208ENST00000600456 EMILIN1Q9Y6C2 1016 aa18.81■□□□□ 0.6
SNRPA-208ENST00000600456 SMG6Q86US8 1419 aaKnown RBP18.81■□□□□ 0.6
SNRPA-208ENST00000600456 THSD7AQ9UPZ6 1657 aa18.8■□□□□ 0.6
SNRPA-208ENST00000600456 A0A0G2JS52 829 aa18.8■□□□□ 0.6
SNRPA-208ENST00000600456 MYT1Q01538 1121 aa18.8■□□□□ 0.6
SNRPA-208ENST00000600456 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
SNRPA-208ENST00000600456 CDCA7Q9BWT1 371 aaPredicted RBP18.8■□□□□ 0.6
SNRPA-208ENST00000600456 PEAK1Q9H792 1746 aa18.8■□□□□ 0.6
SNRPA-208ENST00000600456 FAM208AQ9UK61 1670 aaKnown RBP18.79■□□□□ 0.6
SNRPA-208ENST00000600456 SOCS7O14512 581 aa18.79■□□□□ 0.6
SNRPA-208ENST00000600456 HSP90AB2PQ58FF8 381 aa18.79■□□□□ 0.6
SNRPA-208ENST00000600456 NLRP2Q9NX02 1062 aa18.79■□□□□ 0.6
SNRPA-208ENST00000600456 PPM1GO15355 546 aaPredicted RBP18.78■□□□□ 0.6
SNRPA-208ENST00000600456 LTV1Q96GA3 475 aaPredicted RBP18.78■□□□□ 0.6
SNRPA-208ENST00000600456 KRT27Q7Z3Y8 459 aa18.76■□□□□ 0.59
SNRPA-208ENST00000600456 MAP2P11137 1827 aaKnown RBP18.75■□□□□ 0.59
SNRPA-208ENST00000600456 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
SNRPA-208ENST00000600456 DDX10Q13206 875 aaKnown RBP18.74■□□□□ 0.59
SNRPA-208ENST00000600456 ZNF316A6NFI3 1004 aaPredicted RBP18.73■□□□□ 0.59
SNRPA-208ENST00000600456 PARP4Q9UKK3 1724 aaKnown RBP18.73■□□□□ 0.59
SNRPA-208ENST00000600456 IL2RBP14784 551 aa18.72■□□□□ 0.59
SNRPA-208ENST00000600456 PDE3BQ13370 1112 aa18.71■□□□□ 0.59
SNRPA-208ENST00000600456 NBPF6Q5VWK0 638 aa18.71■□□□□ 0.59
SNRPA-208ENST00000600456 NBPF4Q96M43 638 aa18.71■□□□□ 0.59
SNRPA-208ENST00000600456 BRWD3Q6RI45 1802 aa18.71■□□□□ 0.59
SNRPA-208ENST00000600456 WNK3Q9BYP7 1800 aa18.71■□□□□ 0.59
SNRPA-208ENST00000600456 DDB1Q16531 1140 aa18.7■□□□□ 0.58
SNRPA-208ENST00000600456 NCAPD2Q15021 1401 aa18.69■□□□□ 0.58
SNRPA-208ENST00000600456 MTHFSP49914 203 aa18.69■□□□□ 0.58
SNRPA-208ENST00000600456 CNGB1Q14028 1251 aaPredicted RBP18.69■□□□□ 0.58
SNRPA-208ENST00000600456 EIF4A2Q14240 407 aaKnown RBP18.69■□□□□ 0.58
SNRPA-208ENST00000600456 LRRC37A3O60309 1634 aa18.69■□□□□ 0.58
SNRPA-208ENST00000600456 TNS2Q63HR2 1409 aa18.67■□□□□ 0.58
SNRPA-208ENST00000600456 EXOC5O00471 708 aa18.67■□□□□ 0.58
SNRPA-208ENST00000600456 PARD3Q8TEW0 1356 aa18.67■□□□□ 0.58
SNRPA-208ENST00000600456 FAM196AQ6ZSG2 479 aa18.66■□□□□ 0.58
SNRPA-208ENST00000600456 RAPGEF4Q8WZA2 1011 aa18.66■□□□□ 0.58
SNRPA-208ENST00000600456 EYA1Q99502 592 aa18.66■□□□□ 0.58
SNRPA-208ENST00000600456 PPP2R1AP30153 589 aa18.65■□□□□ 0.58
SNRPA-208ENST00000600456 CCDC125Q86Z20 511 aa18.65■□□□□ 0.58
SNRPA-208ENST00000600456 USHBP1Q8N6Y0 703 aa18.65■□□□□ 0.58
SNRPA-208ENST00000600456 UPF1Q92900 1129 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNRPA-208ENST00000600456 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
SNRPA-208ENST00000600456 OVOS2A0A0G2JMS6 1433 aa18.65■□□□□ 0.58
SNRPA-208ENST00000600456 RGPD2P0DJD1 1756 aa18.64■□□□□ 0.57
SNRPA-208ENST00000600456 RALBP1Q15311 655 aa18.64■□□□□ 0.57
SNRPA-208ENST00000600456 PLEKHG2Q9H7P9 1386 aa18.64■□□□□ 0.57
SNRPA-208ENST00000600456 MEGF6O75095 1541 aa18.64■□□□□ 0.57
SNRPA-208ENST00000600456 TATP17735 454 aaPredicted RBP18.63■□□□□ 0.57
SNRPA-208ENST00000600456 IL13P35225 146 aa18.63■□□□□ 0.57
SNRPA-208ENST00000600456 CFAP53Q96M91 514 aa18.62■□□□□ 0.57
SNRPA-208ENST00000600456 BCL9O00512 1426 aa18.62■□□□□ 0.57
SNRPA-208ENST00000600456 DIAPH1O60610 1272 aaKnown RBP18.61■□□□□ 0.57
SNRPA-208ENST00000600456 FAM182BQ5T319 152 aa18.61■□□□□ 0.57
SNRPA-208ENST00000600456 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
SNRPA-208ENST00000600456 COL3A1P02461 1466 aaPredicted RBP18.6■□□□□ 0.57
SNRPA-208ENST00000600456 ZCRB1Q8TBF4 217 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms