RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 PNPLA7Q6ZV29 1317 aa13.91□□□□□ -0.18
SMARCA4-218ENST00000592158 BCL9O00512 1426 aa13.91□□□□□ -0.18
SMARCA4-218ENST00000592158 CLTCL1P53675 1640 aa13.91□□□□□ -0.18
SMARCA4-218ENST00000592158 CTCFP49711 727 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-218ENST00000592158 STK26Q9P289 416 aa13.91□□□□□ -0.18
SMARCA4-218ENST00000592158 CD2APQ9Y5K6 639 aa13.91□□□□□ -0.18
SMARCA4-218ENST00000592158 AKAP12Q02952 1782 aa13.91□□□□□ -0.18
SMARCA4-218ENST00000592158 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.18
SMARCA4-218ENST00000592158 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-218ENST00000592158 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
SMARCA4-218ENST00000592158 SMC1BQ8NDV3 1235 aa13.89□□□□□ -0.19
SMARCA4-218ENST00000592158 TUBGCP6Q96RT7 1819 aa13.87□□□□□ -0.19
SMARCA4-218ENST00000592158 GPRASP1Q5JY77 1395 aa13.87□□□□□ -0.19
SMARCA4-218ENST00000592158 LBX1P52954 281 aa13.87□□□□□ -0.19
SMARCA4-218ENST00000592158 LRRC4BQ9NT99 713 aa13.87□□□□□ -0.19
SMARCA4-218ENST00000592158 PAK3O75914 559 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-218ENST00000592158 AIDAQ96BJ3 306 aa13.86□□□□□ -0.19
SMARCA4-218ENST00000592158 IGSF1Q8N6C5 1336 aa13.86□□□□□ -0.19
SMARCA4-218ENST00000592158 CICQ96RK0 1608 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-218ENST00000592158 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
SMARCA4-218ENST00000592158 CFAP44Q96MT7 982 aa13.84□□□□□ -0.19
SMARCA4-218ENST00000592158 ACIN1Q9UKV3 1341 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-218ENST00000592158 LMO7Q8WWI1 1683 aa13.83□□□□□ -0.2
SMARCA4-218ENST00000592158 C10orf71Q711Q0 1435 aa13.82□□□□□ -0.2
SMARCA4-218ENST00000592158 MSL1Q68DK7 614 aa13.82□□□□□ -0.2
SMARCA4-218ENST00000592158 RRAGCQ9HB90 399 aa13.82□□□□□ -0.2
SMARCA4-218ENST00000592158 MKRN1Q9UHC7 482 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-218ENST00000592158 BRD4O60885 1362 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-218ENST00000592158 CRB1P82279 1406 aa13.81□□□□□ -0.2
SMARCA4-218ENST00000592158 HIRIP3Q9BW71 556 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-218ENST00000592158 NHSQ6T4R5 1651 aa13.81□□□□□ -0.2
SMARCA4-218ENST00000592158 KIF1BO60333 1816 aa13.8□□□□□ -0.2
SMARCA4-218ENST00000592158 MSH5O43196 834 aa13.8□□□□□ -0.2
SMARCA4-218ENST00000592158 KNDC1Q76NI1 1749 aa13.8□□□□□ -0.2
SMARCA4-218ENST00000592158 ANKRD30BQ9BXX2 1392 aa13.8□□□□□ -0.2
SMARCA4-218ENST00000592158 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-218ENST00000592158 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
SMARCA4-218ENST00000592158 PRPF38BQ5VTL8 546 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-218ENST00000592158 ACSBG1Q96GR2 724 aa13.79□□□□□ -0.2
SMARCA4-218ENST00000592158 KDM2BQ8NHM5 1336 aa13.79□□□□□ -0.2
SMARCA4-218ENST00000592158 ABCC11Q96J66 1382 aa13.79□□□□□ -0.2
SMARCA4-218ENST00000592158 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
SMARCA4-218ENST00000592158 PXDNLA1KZ92 1463 aa13.78□□□□□ -0.2
SMARCA4-218ENST00000592158 BTAF1O14981 1849 aa13.78□□□□□ -0.2
SMARCA4-218ENST00000592158 WNK3Q9BYP7 1800 aa13.78□□□□□ -0.2
SMARCA4-218ENST00000592158 NUTM2GQ5VZR2 741 aa13.77□□□□□ -0.21
SMARCA4-218ENST00000592158 ANKARQ7Z5J8 1434 aa13.76□□□□□ -0.21
SMARCA4-218ENST00000592158 HSPA8P11142 646 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-218ENST00000592158 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-218ENST00000592158 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
SMARCA4-218ENST00000592158 COL23A1Q86Y22 540 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-218ENST00000592158 CPDO75976 1380 aa13.74□□□□□ -0.21
SMARCA4-218ENST00000592158 DLL1O00548 723 aa13.74□□□□□ -0.21
SMARCA4-218ENST00000592158 SLC27A3Q5K4L6 730 aa13.74□□□□□ -0.21
SMARCA4-218ENST00000592158 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
SMARCA4-218ENST00000592158 NUP155O75694 1391 aa13.73□□□□□ -0.21
SMARCA4-218ENST00000592158 KANK4Q5T7N3 995 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-218ENST00000592158 C9orf131Q5VYM1 1079 aa13.73□□□□□ -0.21
SMARCA4-218ENST00000592158 ARHGAP27Q6ZUM4 889 aa13.73□□□□□ -0.21
SMARCA4-218ENST00000592158 TOM1L2Q6ZVM7 507 aa13.73□□□□□ -0.21
SMARCA4-218ENST00000592158 NGDNQ8NEJ9 315 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-218ENST00000592158 CDCA7Q9BWT1 371 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-218ENST00000592158 WBP1LQ9NX94 342 aa13.73□□□□□ -0.21
SMARCA4-218ENST00000592158 USP6P35125 1406 aa13.73□□□□□ -0.21
SMARCA4-218ENST00000592158 EXOC5O00471 708 aa13.72□□□□□ -0.21
SMARCA4-218ENST00000592158 KCNQ4P56696 695 aa13.72□□□□□ -0.21
SMARCA4-218ENST00000592158 PPLO60437 1756 aa13.71□□□□□ -0.21
SMARCA4-218ENST00000592158 RPGRIP1LQ68CZ1 1315 aa13.71□□□□□ -0.21
SMARCA4-218ENST00000592158 PKD1L3Q7Z443 1732 aa13.71□□□□□ -0.21
SMARCA4-218ENST00000592158 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
SMARCA4-218ENST00000592158 TRPM1Q7Z4N2 1603 aa13.71□□□□□ -0.22
SMARCA4-218ENST00000592158 CNTNAP1P78357 1384 aa13.7□□□□□ -0.22
SMARCA4-218ENST00000592158 PIK3C2AO00443 1686 aa13.69□□□□□ -0.22
SMARCA4-218ENST00000592158 SAFB2Q14151 953 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMARCA4-218ENST00000592158 SIRT1Q96EB6 747 aa13.69□□□□□ -0.22
SMARCA4-218ENST00000592158 BCS1LQ9Y276 419 aa13.68□□□□□ -0.22
SMARCA4-218ENST00000592158 YTHDC2Q9H6S0 1430 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-218ENST00000592158 VIRMAQ69YN4 1812 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-218ENST00000592158 PRR36Q9H6K5 1346 aa13.66□□□□□ -0.22
SMARCA4-218ENST00000592158 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
SMARCA4-218ENST00000592158 VEGFBP49765 207 aa13.65□□□□□ -0.22
SMARCA4-218ENST00000592158 ADGRF5Q8IZF2 1346 aa13.64□□□□□ -0.23
SMARCA4-218ENST00000592158 VEGFAP15692 232 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-218ENST00000592158 GCC1Q96CN9 775 aa13.63□□□□□ -0.23
SMARCA4-218ENST00000592158 RNF181Q9P0P0 153 aa13.63□□□□□ -0.23
SMARCA4-218ENST00000592158 COL18A1P39060 1754 aa13.63□□□□□ -0.23
SMARCA4-218ENST00000592158 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
SMARCA4-218ENST00000592158 WDR17Q8IZU2 1322 aa13.62□□□□□ -0.23
SMARCA4-218ENST00000592158 GCP02774 474 aa13.61□□□□□ -0.23
SMARCA4-218ENST00000592158 MCOLN1Q9GZU1 580 aa13.61□□□□□ -0.23
SMARCA4-218ENST00000592158 VPS8Q8N3P4 1428 aa13.61□□□□□ -0.23
SMARCA4-218ENST00000592158 N4BP2Q86UW6 1770 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-218ENST00000592158 CUL9Q8IWT3 2517 aa13.59□□□□□ -0.23
SMARCA4-218ENST00000592158 A0A0C4DFX4 3053 aa13.59□□□□□ -0.23
SMARCA4-218ENST00000592158 HABP4Q5JVS0 413 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-218ENST00000592158 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
SMARCA4-218ENST00000592158 FCHSD2O94868 740 aa13.58□□□□□ -0.24
SMARCA4-218ENST00000592158 CARD10Q9BWT7 1032 aa13.58□□□□□ -0.24
SMARCA4-218ENST00000592158 EIF3AQ14152 1382 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-218ENST00000592158 LY75O60449 1722 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms