RNA–Protein interactions for RNA: ENST00000590359.1

ABCA8-213, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 4

Gene ABCA8, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-213ENST00000590359 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.55□□□□□ -1.04
ABCA8-213ENST00000590359 LRRN4Q8WUT4 740 aa8.55□□□□□ -1.04
ABCA8-213ENST00000590359 SLC10A4Q96EP9 437 aa8.55□□□□□ -1.04
ABCA8-213ENST00000590359 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
ABCA8-213ENST00000590359 FIGNL2A6NMB9 653 aa8.54□□□□□ -1.04
ABCA8-213ENST00000590359 LOC100996750A0A140TA64 210 aa8.53□□□□□ -1.04
ABCA8-213ENST00000590359 PDXDC2PQ6P474 469 aa8.53□□□□□ -1.04
ABCA8-213ENST00000590359 KRTAP4-6Q9BYQ5 205 aa8.53□□□□□ -1.04
ABCA8-213ENST00000590359 FKBPLQ9UIM3 349 aa8.53□□□□□ -1.04
ABCA8-213ENST00000590359 ATP1B4Q9UN42 357 aaPredicted RBP8.53□□□□□ -1.04
ABCA8-213ENST00000590359 PTSQ03393 145 aa8.52□□□□□ -1.05
ABCA8-213ENST00000590359 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
ABCA8-213ENST00000590359 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
ABCA8-213ENST00000590359 NR6A1Q15406 480 aa8.51□□□□□ -1.05
ABCA8-213ENST00000590359 Q6ZVU0 165 aa8.51□□□□□ -1.05
ABCA8-213ENST00000590359 SPINT1O43278 529 aa8.5□□□□□ -1.05
ABCA8-213ENST00000590359 KRT76Q01546 638 aa8.5□□□□□ -1.05
ABCA8-213ENST00000590359 FBXO31Q5XUX0 539 aaPredicted RBP8.5□□□□□ -1.05
ABCA8-213ENST00000590359 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
ABCA8-213ENST00000590359 AGBL1Q96MI9 1066 aa8.5□□□□□ -1.05
ABCA8-213ENST00000590359 CDV3Q9UKY7 258 aaKnown RBP8.5□□□□□ -1.05
ABCA8-213ENST00000590359 DHX9Q08211 1270 aaKnown RBP8.49□□□□□ -1.05
ABCA8-213ENST00000590359 PROCA1Q8NCQ7 364 aaPredicted RBP8.49□□□□□ -1.05
ABCA8-213ENST00000590359 CNTNAP3BQ96NU0 1288 aa8.49□□□□□ -1.05
ABCA8-213ENST00000590359 CNTNAP3Q9BZ76 1288 aa8.49□□□□□ -1.05
ABCA8-213ENST00000590359 RELBQ01201 579 aa8.48□□□□□ -1.05
ABCA8-213ENST00000590359 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
ABCA8-213ENST00000590359 INTS6LQ5JSJ4 861 aaKnown RBP8.48□□□□□ -1.05
ABCA8-213ENST00000590359 CCDC155Q8N6L0 562 aa8.48□□□□□ -1.05
ABCA8-213ENST00000590359 AP1G2O75843 785 aa8.47□□□□□ -1.05
ABCA8-213ENST00000590359 RAB15P59190 212 aa8.47□□□□□ -1.05
ABCA8-213ENST00000590359 PTK2Q05397 1052 aa8.47□□□□□ -1.05
ABCA8-213ENST00000590359 OCSTAMPQ9BR26 566 aa8.47□□□□□ -1.05
ABCA8-213ENST00000590359 ZC3H4Q9UPT8 1303 aaKnown RBP8.47□□□□□ -1.05
ABCA8-213ENST00000590359 CTSOP43234 321 aaPredicted RBP8.46□□□□□ -1.06
ABCA8-213ENST00000590359 SH3D19Q5HYK7 790 aa8.46□□□□□ -1.06
ABCA8-213ENST00000590359 ADAM32Q8TC27 787 aa8.46□□□□□ -1.06
ABCA8-213ENST00000590359 INSM2Q96T92 566 aaPredicted RBP8.46□□□□□ -1.06
ABCA8-213ENST00000590359 COL25A1Q9BXS0 654 aaPredicted RBP8.46□□□□□ -1.06
ABCA8-213ENST00000590359 GPBP1L1Q9HC44 474 aaPredicted RBP8.46□□□□□ -1.06
ABCA8-213ENST00000590359 POLMQ9NP87 494 aaPredicted RBP8.46□□□□□ -1.06
ABCA8-213ENST00000590359 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.45□□□□□ -1.06
ABCA8-213ENST00000590359 KDM4CQ9H3R0 1056 aa8.45□□□□□ -1.06
ABCA8-213ENST00000590359 CDC14CA4D256 554 aa8.44□□□□□ -1.06
ABCA8-213ENST00000590359 RNFT1Q5M7Z0 435 aa8.44□□□□□ -1.06
ABCA8-213ENST00000590359 EPS8L1Q8TE68 723 aa8.44□□□□□ -1.06
ABCA8-213ENST00000590359 NANOS1Q8WY41 292 aaKnown RBP8.44□□□□□ -1.06
ABCA8-213ENST00000590359 FAM117AQ9C073 453 aa8.44□□□□□ -1.06
ABCA8-213ENST00000590359 ZNF395Q9H8N7 513 aaPredicted RBP8.44□□□□□ -1.06
ABCA8-213ENST00000590359 TMPRSS4Q9NRS4 437 aa8.44□□□□□ -1.06
ABCA8-213ENST00000590359 SLC35F4A4IF30 521 aa8.43□□□□□ -1.06
ABCA8-213ENST00000590359 ITGA6P23229 1130 aa8.43□□□□□ -1.06
ABCA8-213ENST00000590359 KCNMA1Q12791 1236 aa8.43□□□□□ -1.06
ABCA8-213ENST00000590359 NBPF20Q3BBV1 942 aa8.43□□□□□ -1.06
ABCA8-213ENST00000590359 PPP2R2DQ66LE6 453 aa8.43□□□□□ -1.06
ABCA8-213ENST00000590359 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
ABCA8-213ENST00000590359 GPSM3Q9Y4H4 160 aa8.43□□□□□ -1.06
ABCA8-213ENST00000590359 VWA5B2Q8N398 1253 aa8.42□□□□□ -1.06
ABCA8-213ENST00000590359 KCTD17Q8N5Z5 321 aa8.42□□□□□ -1.06
ABCA8-213ENST00000590359 DDRGK1Q96HY6 314 aa8.42□□□□□ -1.06
ABCA8-213ENST00000590359 HMX1Q9NP08 348 aaPredicted RBP8.42□□□□□ -1.06
ABCA8-213ENST00000590359 GSK3AP49840 483 aa8.41□□□□□ -1.06
ABCA8-213ENST00000590359 DZIP3Q86Y13 1208 aaKnown RBP8.41□□□□□ -1.06
ABCA8-213ENST00000590359 SVOPQ8N4V2 548 aa8.41□□□□□ -1.06
ABCA8-213ENST00000590359 PNMA1Q8ND90 353 aa8.41□□□□□ -1.06
ABCA8-213ENST00000590359 RNF217Q8TC41 542 aa8.41□□□□□ -1.06
ABCA8-213ENST00000590359 ADAMTS8Q9UP79 889 aa8.41□□□□□ -1.06
ABCA8-213ENST00000590359 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
ABCA8-213ENST00000590359 SV2AQ7L0J3 742 aa8.4□□□□□ -1.06
ABCA8-213ENST00000590359 ERVH48-1M5A8F1 160 aa8.39□□□□□ -1.07
ABCA8-213ENST00000590359 ADH1AP07327 375 aa8.39□□□□□ -1.07
ABCA8-213ENST00000590359 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
ABCA8-213ENST00000590359 ZNF385CQ66K41 422 aaPredicted RBP8.39□□□□□ -1.07
ABCA8-213ENST00000590359 RNF225M0QZC1 329 aaPredicted RBP8.38□□□□□ -1.07
ABCA8-213ENST00000590359 GDF11O95390 407 aa8.38□□□□□ -1.07
ABCA8-213ENST00000590359 RASSF7Q02833 373 aa8.38□□□□□ -1.07
ABCA8-213ENST00000590359 TMEM151AQ8N4L1 468 aa8.38□□□□□ -1.07
ABCA8-213ENST00000590359 WHAMMQ8TF30 809 aa8.38□□□□□ -1.07
ABCA8-213ENST00000590359 SENP3-EIF4A1A0A087X0R7 540 aa8.37□□□□□ -1.07
ABCA8-213ENST00000590359 LILRA1O75019 489 aa8.37□□□□□ -1.07
ABCA8-213ENST00000590359 ADD1P35611 737 aaKnown RBP8.37□□□□□ -1.07
ABCA8-213ENST00000590359 FOXD4L5Q5VV16 416 aaPredicted RBP8.37□□□□□ -1.07
ABCA8-213ENST00000590359 CYLDQ9NQC7 956 aa8.36□□□□□ -1.07
ABCA8-213ENST00000590359 SLURP2P0DP57 97 aa8.35□□□□□ -1.07
ABCA8-213ENST00000590359 PTGIRP43119 386 aa8.35□□□□□ -1.07
ABCA8-213ENST00000590359 KDF1Q8NAX2 398 aaPredicted RBP8.35□□□□□ -1.07
ABCA8-213ENST00000590359 RFC5P40937 340 aa8.34□□□□□ -1.07
ABCA8-213ENST00000590359 LYSMD3Q7Z3D4 306 aa8.34□□□□□ -1.07
ABCA8-213ENST00000590359 ESPNB1AK53 854 aa8.33□□□□□ -1.08
ABCA8-213ENST00000590359 ADAMTS2O95450 1211 aa8.32□□□□□ -1.08
ABCA8-213ENST00000590359 RHOQP17081 205 aa8.32□□□□□ -1.08
ABCA8-213ENST00000590359 PRICKLE2Q7Z3G6 844 aa8.32□□□□□ -1.08
ABCA8-213ENST00000590359 CUEDC1Q9NWM3 386 aaPredicted RBP8.32□□□□□ -1.08
ABCA8-213ENST00000590359 ARHGEF15O94989 841 aa8.31□□□□□ -1.08
ABCA8-213ENST00000590359 IRS1P35568 1242 aa8.31□□□□□ -1.08
ABCA8-213ENST00000590359 MARSP56192 900 aaKnown RBP8.31□□□□□ -1.08
ABCA8-213ENST00000590359 SEPT12Q8IYM1 358 aa8.31□□□□□ -1.08
ABCA8-213ENST00000590359 TRIM34Q9BYJ4 488 aa8.31□□□□□ -1.08
ABCA8-213ENST00000590359 PCDHB9Q9Y5E1 797 aa8.31□□□□□ -1.08
ABCA8-213ENST00000590359 ATP5J2-PTCD1G3V325 749 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms