RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PNMA1Q8ND90 353 aa8.13□□□□□ -1.11
SMAD4-207ENST00000589076 ARHGAP9Q9BRR9 750 aa8.13□□□□□ -1.11
SMAD4-207ENST00000589076 DNMT3LQ9UJW3 386 aa8.13□□□□□ -1.11
SMAD4-207ENST00000589076 ERFEQ4G0M1 354 aa8.12□□□□□ -1.11
SMAD4-207ENST00000589076 PDXDC2PQ6P474 469 aa8.12□□□□□ -1.11
SMAD4-207ENST00000589076 POLR3EQ9NVU0 708 aa8.12□□□□□ -1.11
SMAD4-207ENST00000589076 PPP1R26Q5T8A7 1209 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-207ENST00000589076 TRIM52Q96A61 297 aa8.11□□□□□ -1.11
SMAD4-207ENST00000589076 SLC24A3Q9HC58 644 aa8.11□□□□□ -1.11
SMAD4-207ENST00000589076 ZC3H4Q9UPT8 1303 aaKnown RBP8.1□□□□□ -1.11
SMAD4-207ENST00000589076 RNF225M0QZC1 329 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-207ENST00000589076 FKBPLQ9UIM3 349 aa8.1□□□□□ -1.11
SMAD4-207ENST00000589076 PTSQ03393 145 aa8.09□□□□□ -1.11
SMAD4-207ENST00000589076 PTK2Q05397 1052 aa8.09□□□□□ -1.11
SMAD4-207ENST00000589076 KCTD15Q96SI1 283 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-207ENST00000589076 FIGNL2A6NMB9 653 aa8.08□□□□□ -1.12
SMAD4-207ENST00000589076 CTDSPL2Q05D32 466 aa8.08□□□□□ -1.12
SMAD4-207ENST00000589076 Q6ZVU0 165 aa8.08□□□□□ -1.12
SMAD4-207ENST00000589076 BCANQ96GW7 911 aa8.08□□□□□ -1.12
SMAD4-207ENST00000589076 NBPF20Q3BBV1 942 aa8.07□□□□□ -1.12
SMAD4-207ENST00000589076 SPINT1O43278 529 aa8.06□□□□□ -1.12
SMAD4-207ENST00000589076 KCNMA1Q12791 1236 aa8.06□□□□□ -1.12
SMAD4-207ENST00000589076 CCDC155Q8N6L0 562 aa8.06□□□□□ -1.12
SMAD4-207ENST00000589076 CNTNAP3BQ96NU0 1288 aa8.06□□□□□ -1.12
SMAD4-207ENST00000589076 CNTNAP3Q9BZ76 1288 aa8.06□□□□□ -1.12
SMAD4-207ENST00000589076 GPSM3Q9Y4H4 160 aa8.06□□□□□ -1.12
SMAD4-207ENST00000589076 CBLBQ13191 982 aa8.05□□□□□ -1.12
SMAD4-207ENST00000589076 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
SMAD4-207ENST00000589076 POLMQ9NP87 494 aaPredicted RBP8.05□□□□□ -1.12
SMAD4-207ENST00000589076 TMEM151AQ8N4L1 468 aa8.04□□□□□ -1.12
SMAD4-207ENST00000589076 NANOS1Q8WY41 292 aaKnown RBP8.04□□□□□ -1.12
SMAD4-207ENST00000589076 COL25A1Q9BXS0 654 aaPredicted RBP8.04□□□□□ -1.12
SMAD4-207ENST00000589076 RELBQ01201 579 aa8.03□□□□□ -1.12
SMAD4-207ENST00000589076 SV2AQ7L0J3 742 aa8.03□□□□□ -1.12
SMAD4-207ENST00000589076 LRRN4Q8WUT4 740 aa8.03□□□□□ -1.12
SMAD4-207ENST00000589076 CDC14CA4D256 554 aa8.02□□□□□ -1.13
SMAD4-207ENST00000589076 NR6A1Q15406 480 aa8.02□□□□□ -1.13
SMAD4-207ENST00000589076 SVOPQ8N4V2 548 aa8.02□□□□□ -1.13
SMAD4-207ENST00000589076 DDRGK1Q96HY6 314 aa8.02□□□□□ -1.13
SMAD4-207ENST00000589076 AP1G2O75843 785 aa8.01□□□□□ -1.13
SMAD4-207ENST00000589076 GDF11O95390 407 aa8.01□□□□□ -1.13
SMAD4-207ENST00000589076 SH3D19Q5HYK7 790 aa8.01□□□□□ -1.13
SMAD4-207ENST00000589076 INTS6LQ5JSJ4 861 aaKnown RBP8.01□□□□□ -1.13
SMAD4-207ENST00000589076 DZIP3Q86Y13 1208 aaKnown RBP8.01□□□□□ -1.13
SMAD4-207ENST00000589076 SLC35F4A4IF30 521 aa8□□□□□ -1.13
SMAD4-207ENST00000589076 ITGA6P23229 1130 aa8□□□□□ -1.13
SMAD4-207ENST00000589076 GPR161Q8N6U8 529 aaKnown RBP8□□□□□ -1.13
SMAD4-207ENST00000589076 ADAM32Q8TC27 787 aa8□□□□□ -1.13
SMAD4-207ENST00000589076 INSM2Q96T92 566 aaPredicted RBP8□□□□□ -1.13
SMAD4-207ENST00000589076 ADAMTS8Q9UP79 889 aa8□□□□□ -1.13
SMAD4-207ENST00000589076 CTSOP43234 321 aaPredicted RBP7.99□□□□□ -1.13
SMAD4-207ENST00000589076 RAB15P59190 212 aa7.99□□□□□ -1.13
SMAD4-207ENST00000589076 PPP2R2DQ66LE6 453 aa7.99□□□□□ -1.13
SMAD4-207ENST00000589076 VWA5B2Q8N398 1253 aa7.99□□□□□ -1.13
SMAD4-207ENST00000589076 KCTD17Q8N5Z5 321 aa7.99□□□□□ -1.13
SMAD4-207ENST00000589076 AGBL1Q96MI9 1066 aa7.99□□□□□ -1.13
SMAD4-207ENST00000589076 MARSP56192 900 aaKnown RBP7.98□□□□□ -1.13
SMAD4-207ENST00000589076 KRT76Q01546 638 aa7.98□□□□□ -1.13
SMAD4-207ENST00000589076 RASSF7Q02833 373 aa7.98□□□□□ -1.13
SMAD4-207ENST00000589076 ZNF395Q9H8N7 513 aaPredicted RBP7.98□□□□□ -1.13
SMAD4-207ENST00000589076 MAP3K10Q02779 954 aa7.97□□□□□ -1.13
SMAD4-207ENST00000589076 ADH1AP07327 375 aa7.96□□□□□ -1.14
SMAD4-207ENST00000589076 RNF217Q8TC41 542 aa7.96□□□□□ -1.14
SMAD4-207ENST00000589076 ZNF385CQ66K41 422 aaPredicted RBP7.95□□□□□ -1.14
SMAD4-207ENST00000589076 FOXR1Q6PIV2 292 aa7.95□□□□□ -1.14
SMAD4-207ENST00000589076 LYSMD3Q7Z3D4 306 aa7.95□□□□□ -1.14
SMAD4-207ENST00000589076 ZNF784Q8NCA9 323 aaPredicted RBP7.95□□□□□ -1.14
SMAD4-207ENST00000589076 SCARF2Q96GP6 870 aaPredicted RBP7.95□□□□□ -1.14
SMAD4-207ENST00000589076 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMAD4-207ENST00000589076 KDM4CQ9H3R0 1056 aa7.95□□□□□ -1.14
SMAD4-207ENST00000589076 SLURP2P0DP57 97 aa7.94□□□□□ -1.14
SMAD4-207ENST00000589076 PTGIRP43119 386 aa7.94□□□□□ -1.14
SMAD4-207ENST00000589076 RNFT1Q5M7Z0 435 aa7.94□□□□□ -1.14
SMAD4-207ENST00000589076 SEPT12Q8IYM1 358 aa7.94□□□□□ -1.14
SMAD4-207ENST00000589076 PROCA1Q8NCQ7 364 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-207ENST00000589076 ENAMQ9NRM1 1142 aa7.94□□□□□ -1.14
SMAD4-207ENST00000589076 TMPRSS4Q9NRS4 437 aa7.94□□□□□ -1.14
SMAD4-207ENST00000589076 ERVH48-1M5A8F1 160 aa7.93□□□□□ -1.14
SMAD4-207ENST00000589076 USP17L8P0C7I0 530 aa7.93□□□□□ -1.14
SMAD4-207ENST00000589076 KANK3Q6NY19 840 aa7.93□□□□□ -1.14
SMAD4-207ENST00000589076 CCDC125Q86Z20 511 aa7.93□□□□□ -1.14
SMAD4-207ENST00000589076 SUZ12Q15022 739 aaKnown RBP7.92□□□□□ -1.14
SMAD4-207ENST00000589076 GMCL1Q96IK5 515 aa7.92□□□□□ -1.14
SMAD4-207ENST00000589076 IGHA1P01876 353 aa7.91□□□□□ -1.14
SMAD4-207ENST00000589076 IRS1P35568 1242 aa7.91□□□□□ -1.14
SMAD4-207ENST00000589076 SRSF11Q05519 484 aaKnown RBP7.91□□□□□ -1.14
SMAD4-207ENST00000589076 ZNF592Q92610 1267 aa7.91□□□□□ -1.14
SMAD4-207ENST00000589076 OCSTAMPQ9BR26 566 aa7.91□□□□□ -1.14
SMAD4-207ENST00000589076 FAM117AQ9C073 453 aa7.91□□□□□ -1.14
SMAD4-207ENST00000589076 ESF1Q9H501 851 aaKnown RBP7.91□□□□□ -1.14
SMAD4-207ENST00000589076 ADAMTS2O95450 1211 aa7.9□□□□□ -1.14
SMAD4-207ENST00000589076 GSK3AP49840 483 aa7.9□□□□□ -1.14
SMAD4-207ENST00000589076 FOXK2Q01167 660 aa7.9□□□□□ -1.14
SMAD4-207ENST00000589076 GPBP1L1Q9HC44 474 aaPredicted RBP7.9□□□□□ -1.14
SMAD4-207ENST00000589076 DNMT3AQ9Y6K1 912 aaPredicted RBP7.9□□□□□ -1.14
SMAD4-207ENST00000589076 ESPNB1AK53 854 aa7.89□□□□□ -1.15
SMAD4-207ENST00000589076 ATP5J2-PTCD1G3V325 749 aa7.89□□□□□ -1.15
SMAD4-207ENST00000589076 LILRA1O75019 489 aa7.89□□□□□ -1.15
SMAD4-207ENST00000589076 TMEM259Q4ZIN3 620 aa7.89□□□□□ -1.15
SMAD4-207ENST00000589076 PRICKLE2Q7Z3G6 844 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms