RNA–Protein interactions for RNA: ENST00000588199.5

AFMID-207, Transcript of arylformamidase, human

TSL 5

Gene AFMID, Length 778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFMID-207	ENST00000588199	DIEXF	Q68CQ4	756 aa	Known RBP	15.13	■□□□□ 0.01
AFMID-207	ENST00000588199	LARP1	Q6PKG0	1096 aa	Known RBP	15.13	■□□□□ 0.01
AFMID-207	ENST00000588199	ILDR2	Q71H61	639 aa		15.13	■□□□□ 0.01
AFMID-207	ENST00000588199	NRAP	Q86VF7	1730 aa		15.13	■□□□□ 0.01
AFMID-207	ENST00000588199	LTN1	O94822	1766 aa		15.13	■□□□□ 0.01
AFMID-207	ENST00000588199	ATRN	O75882	1429 aa		15.12	■□□□□ 0.01
AFMID-207	ENST00000588199	POLK	Q9UBT6	870 aa		15.12	■□□□□ 0.01
AFMID-207	ENST00000588199	PEAK1	Q9H792	1746 aa		15.12	■□□□□ 0.01
AFMID-207	ENST00000588199	ANKRD26	Q9UPS8	1709 aa		15.12	■□□□□ 0.01
AFMID-207	ENST00000588199	PPM1G	O15355	546 aa	Predicted RBP	15.11	■□□□□ 0.01
AFMID-207	ENST00000588199	HOXC9	P31274	260 aa		15.11	■□□□□ 0.01
AFMID-207	ENST00000588199	EVA1C	P58658	441 aa		15.11	■□□□□ 0.01
AFMID-207	ENST00000588199	LTV1	Q96GA3	475 aa	Predicted RBP	15.11	■□□□□ 0.01
AFMID-207	ENST00000588199	TRPC5	Q9UL62	973 aa	Predicted RBP	15.11	■□□□□ 0.01
AFMID-207	ENST00000588199	CCDC9	Q9Y3X0	531 aa	Known RBP	15.11	■□□□□ 0.01
AFMID-207	ENST00000588199	NWD2	Q9ULI1	1742 aa		15.11	■□□□□ 0.01
AFMID-207	ENST00000588199	COL5A2	P05997	1499 aa	Predicted RBP	15.1	■□□□□ 0.01
AFMID-207	ENST00000588199	AMPH	P49418	695 aa		15.1	■□□□□ 0.01
AFMID-207	ENST00000588199	VPS72	Q15906	364 aa		15.1	■□□□□ 0.01
AFMID-207	ENST00000588199	HSP90AB2P	Q58FF8	381 aa		15.1	■□□□□ 0.01
AFMID-207	ENST00000588199	IP6K1	Q92551	441 aa		15.1	■□□□□ 0.01
AFMID-207	ENST00000588199	USP35	Q9P2H5	1018 aa		15.1	■□□□□ 0.01
AFMID-207	ENST00000588199	NSD2	O96028	1365 aa		15.1	■□□□□ 0.01
AFMID-207	ENST00000588199	MAP2	P11137	1827 aa	Known RBP	15.09	■□□□□ 0.01
AFMID-207	ENST00000588199	GJD4	Q96KN9	370 aa	Predicted RBP	15.09	■□□□□ 0.01
AFMID-207	ENST00000588199	GLI3	P10071	1580 aa		15.08	■□□□□ 0
AFMID-207	ENST00000588199	RXRB	P28702	533 aa		15.08	■□□□□ 0
AFMID-207	ENST00000588199	ANKRD24	Q8TF21	1146 aa		15.08	■□□□□ 0
AFMID-207	ENST00000588199	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	15.08	■□□□□ 0
AFMID-207	ENST00000588199	CSB-PGBD3	P0DP91	1061 aa		15.07	■□□□□ 0
AFMID-207	ENST00000588199	RBM6	P78332	1123 aa	Known RBP	15.07	■□□□□ 0
AFMID-207	ENST00000588199	SPATA31A5	Q5VU36	1347 aa		15.07	■□□□□ 0
AFMID-207	ENST00000588199	SPATA31A7	Q8IWB4	1347 aa		15.07	■□□□□ 0
AFMID-207	ENST00000588199	NPC1L1	Q9UHC9	1359 aa		15.07	■□□□□ 0
AFMID-207	ENST00000588199	SPATA31A1	Q5TZJ5	1347 aa		15.06	■□□□□ 0
AFMID-207	ENST00000588199	FAM98C	Q17RN3	349 aa	Known RBP	15.05	■□□□□ -0
AFMID-207	ENST00000588199	TOM1L2	Q6ZVM7	507 aa		15.05	■□□□□ -0
AFMID-207	ENST00000588199	ERBB3	P21860	1342 aa		15.05	■□□□□ -0
AFMID-207	ENST00000588199	WDR17	Q8IZU2	1322 aa		15.05	■□□□□ -0
AFMID-207	ENST00000588199	MTHFS	P49914	203 aa		15.04	■□□□□ -0
AFMID-207	ENST00000588199	NLRP2	Q9NX02	1062 aa		15.04	■□□□□ -0
AFMID-207	ENST00000588199	FLT4	P35916	1363 aa		15.03	■□□□□ -0
AFMID-207	ENST00000588199	USHBP1	Q8N6Y0	703 aa		15.03	■□□□□ -0
AFMID-207	ENST00000588199	RGPD2	P0DJD1	1756 aa		15.03	■□□□□ -0
AFMID-207	ENST00000588199	RGS12	O14924	1447 aa		15.02	■□□□□ -0
AFMID-207	ENST00000588199	BLM	P54132	1417 aa	Predicted RBP	15.02	■□□□□ -0
AFMID-207	ENST00000588199	CRB1	P82279	1406 aa		15.02	■□□□□ -0
AFMID-207	ENST00000588199	RTL1	A6NKG5	1358 aa		15.02	■□□□□ -0
AFMID-207	ENST00000588199	INSR	P06213	1382 aa		15.02	■□□□□ -0
AFMID-207	ENST00000588199	PPP2R1A	P30153	589 aa		15.02	■□□□□ -0
AFMID-207	ENST00000588199	NBPF6	Q5VWK0	638 aa		15.02	■□□□□ -0
AFMID-207	ENST00000588199	NBPF4	Q96M43	638 aa		15.02	■□□□□ -0
AFMID-207	ENST00000588199	ABCC6	O95255	1503 aa		15.02	□□□□□ -0.01
AFMID-207	ENST00000588199	EIF4A2	Q14240	407 aa	Known RBP	15.01	□□□□□ -0.01
AFMID-207	ENST00000588199	SEPT12	Q8IYM1	358 aa		15.01	□□□□□ -0.01
AFMID-207	ENST00000588199	TCP11L2	Q8N4U5	519 aa		15.01	□□□□□ -0.01
AFMID-207	ENST00000588199	SMG6	Q86US8	1419 aa	Known RBP	15	□□□□□ -0.01
AFMID-207	ENST00000588199	CARD10	Q9BWT7	1032 aa		15	□□□□□ -0.01
AFMID-207	ENST00000588199	PARD3	Q8TEW0	1356 aa		14.99	□□□□□ -0.01
AFMID-207	ENST00000588199		A0A0G2JS52	829 aa		14.99	□□□□□ -0.01
AFMID-207	ENST00000588199	ANP32C	O43423	234 aa		14.99	□□□□□ -0.01
AFMID-207	ENST00000588199	ONECUT3	O60422	494 aa	Predicted RBP	14.99	□□□□□ -0.01
AFMID-207	ENST00000588199	MYT1	Q01538	1121 aa		14.99	□□□□□ -0.01
AFMID-207	ENST00000588199	KIF24	Q5T7B8	1368 aa		14.98	□□□□□ -0.01
AFMID-207	ENST00000588199	FAM182B	Q5T319	152 aa		14.98	□□□□□ -0.01
AFMID-207	ENST00000588199	EYA1	Q99502	592 aa		14.98	□□□□□ -0.01
AFMID-207	ENST00000588199	BARGIN	Q6ZT62	677 aa		14.97	□□□□□ -0.01
AFMID-207	ENST00000588199	CDK12	Q9NYV4	1490 aa	Predicted RBP	14.96	□□□□□ -0.01
AFMID-207	ENST00000588199	IL13	P35225	146 aa		14.96	□□□□□ -0.01
AFMID-207	ENST00000588199	BRWD3	Q6RI45	1802 aa		14.96	□□□□□ -0.01
AFMID-207	ENST00000588199	PRKRIP1	Q9H875	184 aa	Predicted RBP	14.95	□□□□□ -0.02
AFMID-207	ENST00000588199	THRAP3	Q9Y2W1	955 aa	Known RBP	14.95	□□□□□ -0.02
AFMID-207	ENST00000588199	FAM208A	Q9UK61	1670 aa	Known RBP	14.95	□□□□□ -0.02
AFMID-207	ENST00000588199	THSD7A	Q9UPZ6	1657 aa		14.95	□□□□□ -0.02
AFMID-207	ENST00000588199	DISP2	A7MBM2	1401 aa		14.94	□□□□□ -0.02
AFMID-207	ENST00000588199	AEBP1	Q8IUX7	1158 aa		14.94	□□□□□ -0.02
AFMID-207	ENST00000588199	COL3A1	P02461	1466 aa	Predicted RBP	14.94	□□□□□ -0.02
AFMID-207	ENST00000588199	RALBP1	Q15311	655 aa		14.93	□□□□□ -0.02
AFMID-207	ENST00000588199	MEGF6	O75095	1541 aa		14.92	□□□□□ -0.02
AFMID-207	ENST00000588199	DIAPH1	O60610	1272 aa	Known RBP	14.92	□□□□□ -0.02
AFMID-207	ENST00000588199	IL2RB	P14784	551 aa		14.92	□□□□□ -0.02
AFMID-207	ENST00000588199	WNK3	Q9BYP7	1800 aa		14.92	□□□□□ -0.02
AFMID-207	ENST00000588199	CCDC184	Q52MB2	194 aa		14.91	□□□□□ -0.02
AFMID-207	ENST00000588199	KRT27	Q7Z3Y8	459 aa		14.91	□□□□□ -0.02
AFMID-207	ENST00000588199	IGSF1	Q8N6C5	1336 aa		14.91	□□□□□ -0.02
AFMID-207	ENST00000588199	HMOX1	P09601	288 aa		14.9	□□□□□ -0.02
AFMID-207	ENST00000588199	SULT6B1	Q6IMI4	303 aa		14.9	□□□□□ -0.02
AFMID-207	ENST00000588199	MARCH10	Q8NA82	808 aa	Predicted RBP	14.9	□□□□□ -0.02
AFMID-207	ENST00000588199	MYBBP1A	Q9BQG0	1328 aa	Known RBP	14.9	□□□□□ -0.02
AFMID-207	ENST00000588199	LRRC37A3	O60309	1634 aa		14.89	□□□□□ -0.03
AFMID-207	ENST00000588199	U2SURP	O15042	1029 aa	Known RBP	14.89	□□□□□ -0.03
AFMID-207	ENST00000588199	DDB1	Q16531	1140 aa		14.89	□□□□□ -0.03
AFMID-207	ENST00000588199	NCAPD2	Q15021	1401 aa		14.89	□□□□□ -0.03
AFMID-207	ENST00000588199	EXOC5	O00471	708 aa		14.88	□□□□□ -0.03
AFMID-207	ENST00000588199	PDE3B	Q13370	1112 aa		14.88	□□□□□ -0.03
AFMID-207	ENST00000588199	CFAP53	Q96M91	514 aa		14.88	□□□□□ -0.03
AFMID-207	ENST00000588199	RGPD1	P0DJD0	1748 aa		14.88	□□□□□ -0.03
AFMID-207	ENST00000588199	PARP4	Q9UKK3	1724 aa	Known RBP	14.88	□□□□□ -0.03
AFMID-207	ENST00000588199	DDX54	Q8TDD1	881 aa	Known RBP	14.87	□□□□□ -0.03
AFMID-207	ENST00000588199	RAPGEF4	Q8WZA2	1011 aa		14.87	□□□□□ -0.03

Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms