RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 C8orf37Q96NL8 207 aa24.77■■□□□ 1.56
H3F3B-206ENST00000587560 MAP3K19Q56UN5 1328 aa24.77■■□□□ 1.56
H3F3B-206ENST00000587560 INSRP06213 1382 aa24.77■■□□□ 1.56
H3F3B-206ENST00000587560 KIF24Q5T7B8 1368 aa24.77■■□□□ 1.56
H3F3B-206ENST00000587560 LMO7Q8WWI1 1683 aa24.76■■□□□ 1.55
H3F3B-206ENST00000587560 TNNT2P45379 298 aaPredicted RBP24.75■■□□□ 1.55
H3F3B-206ENST00000587560 RRS1Q15050 365 aaKnown RBP24.74■■□□□ 1.55
H3F3B-206ENST00000587560 MIER1Q8N108 512 aa24.74■■□□□ 1.55
H3F3B-206ENST00000587560 COL3A1P02461 1466 aaPredicted RBP24.74■■□□□ 1.55
H3F3B-206ENST00000587560 RTL1A6NKG5 1358 aa24.73■■□□□ 1.55
H3F3B-206ENST00000587560 EMILIN1Q9Y6C2 1016 aa24.73■■□□□ 1.55
H3F3B-206ENST00000587560 KIAA0232Q92628 1395 aa24.72■■□□□ 1.55
H3F3B-206ENST00000587560 MTHFSP49914 203 aa24.72■■□□□ 1.55
H3F3B-206ENST00000587560 RGPD5Q99666 1765 aa24.71■■□□□ 1.55
H3F3B-206ENST00000587560 COL14A1Q05707 1796 aaKnown RBP24.7■■□□□ 1.55
H3F3B-206ENST00000587560 SOX12O15370 315 aa24.7■■□□□ 1.54
H3F3B-206ENST00000587560 FLT4P35916 1363 aa24.69■■□□□ 1.54
H3F3B-206ENST00000587560 ZC3H6P61129 1189 aaKnown RBP24.68■■□□□ 1.54
H3F3B-206ENST00000587560 CCDC184Q52MB2 194 aa24.68■■□□□ 1.54
H3F3B-206ENST00000587560 IP6K1Q92551 441 aa24.68■■□□□ 1.54
H3F3B-206ENST00000587560 PLEKHG5O94827 1062 aa24.67■■□□□ 1.54
H3F3B-206ENST00000587560 HOXC9P31274 260 aa24.67■■□□□ 1.54
H3F3B-206ENST00000587560 CCER2I3L3R5 266 aa24.66■■□□□ 1.54
H3F3B-206ENST00000587560 YY1P25490 414 aa24.66■■□□□ 1.54
H3F3B-206ENST00000587560 BLMP54132 1417 aaPredicted RBP24.66■■□□□ 1.54
H3F3B-206ENST00000587560 PLCH1Q4KWH8 1693 aa24.66■■□□□ 1.54
H3F3B-206ENST00000587560 CAMTA1Q9Y6Y1 1673 aa24.66■■□□□ 1.54
H3F3B-206ENST00000587560 FAM83GA6ND36 823 aa24.64■■□□□ 1.54
H3F3B-206ENST00000587560 AXIN2Q9Y2T1 843 aa24.64■■□□□ 1.54
H3F3B-206ENST00000587560 RGPD1P0DJD0 1748 aa24.64■■□□□ 1.53
H3F3B-206ENST00000587560 NRAPQ86VF7 1730 aa24.64■■□□□ 1.53
H3F3B-206ENST00000587560 NWD2Q9ULI1 1742 aa24.64■■□□□ 1.53
H3F3B-206ENST00000587560 HSP90AB2PQ58FF8 381 aa24.63■■□□□ 1.53
H3F3B-206ENST00000587560 SLIT2O94813 1529 aa24.62■■□□□ 1.53
H3F3B-206ENST00000587560 HAP1P54257 671 aaPredicted RBP24.62■■□□□ 1.53
H3F3B-206ENST00000587560 PRDM11Q9NQV5 511 aa24.62■■□□□ 1.53
H3F3B-206ENST00000587560 AMPHP49418 695 aa24.61■■□□□ 1.53
H3F3B-206ENST00000587560 CHRNA2Q15822 529 aa24.61■■□□□ 1.53
H3F3B-206ENST00000587560 FAM208AQ9UK61 1670 aaKnown RBP24.59■■□□□ 1.53
H3F3B-206ENST00000587560 COL5A2P05997 1499 aaPredicted RBP24.59■■□□□ 1.53
H3F3B-206ENST00000587560 BCL9LQ86UU0 1499 aa24.58■■□□□ 1.53
H3F3B-206ENST00000587560 RGPD2P0DJD1 1756 aa24.58■■□□□ 1.53
H3F3B-206ENST00000587560 PPM1GO15355 546 aaPredicted RBP24.58■■□□□ 1.53
H3F3B-206ENST00000587560 ADAMTS2O95450 1211 aa24.58■■□□□ 1.53
H3F3B-206ENST00000587560 IL13P35225 146 aa24.58■■□□□ 1.53
H3F3B-206ENST00000587560 DEFB132Q7Z7B7 95 aa24.58■■□□□ 1.53
H3F3B-206ENST00000587560 EIF4A2Q14240 407 aaKnown RBP24.57■■□□□ 1.52
H3F3B-206ENST00000587560 NCAPD2Q15021 1401 aa24.57■■□□□ 1.52
H3F3B-206ENST00000587560 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.56■■□□□ 1.52
H3F3B-206ENST00000587560 CFAP53Q96M91 514 aa24.56■■□□□ 1.52
H3F3B-206ENST00000587560 TRPC5Q9UL62 973 aaPredicted RBP24.56■■□□□ 1.52
H3F3B-206ENST00000587560 ERBB3P21860 1342 aa24.56■■□□□ 1.52
H3F3B-206ENST00000587560 ATRNO75882 1429 aa24.55■■□□□ 1.52
H3F3B-206ENST00000587560 USP21Q9UK80 565 aa24.55■■□□□ 1.52
H3F3B-206ENST00000587560 PSDA5PKW4 1024 aaPredicted RBP24.54■■□□□ 1.52
H3F3B-206ENST00000587560 DIAPH1O60610 1272 aaKnown RBP24.54■■□□□ 1.52
H3F3B-206ENST00000587560 FNBP4Q8N3X1 1017 aaPredicted RBP24.54■■□□□ 1.52
H3F3B-206ENST00000587560 PNISRQ8TF01 805 aaKnown RBP24.54■■□□□ 1.52
H3F3B-206ENST00000587560 MRS2Q9HD23 443 aa24.54■■□□□ 1.52
H3F3B-206ENST00000587560 ZBTB7CA1YPR0 619 aa24.53■■□□□ 1.52
H3F3B-206ENST00000587560 ANKRD24Q8TF21 1146 aa24.51■■□□□ 1.51
H3F3B-206ENST00000587560 BTG4Q9NY30 223 aa24.51■■□□□ 1.51
H3F3B-206ENST00000587560 WDR17Q8IZU2 1322 aa24.5■■□□□ 1.51
H3F3B-206ENST00000587560 IGSF1Q8N6C5 1336 aa24.5■■□□□ 1.51
H3F3B-206ENST00000587560 EYA1Q99502 592 aa24.49■■□□□ 1.51
H3F3B-206ENST00000587560 KDRP35968 1356 aa24.48■■□□□ 1.51
H3F3B-206ENST00000587560 BRWD3Q6RI45 1802 aa24.48■■□□□ 1.51
H3F3B-206ENST00000587560 NBPF6Q5VWK0 638 aa24.46■■□□□ 1.51
H3F3B-206ENST00000587560 NBPF4Q96M43 638 aa24.46■■□□□ 1.51
H3F3B-206ENST00000587560 LTV1Q96GA3 475 aaPredicted RBP24.45■■□□□ 1.5
H3F3B-206ENST00000587560 NUDCQ9Y266 331 aa24.45■■□□□ 1.5
H3F3B-206ENST00000587560 CRB1P82279 1406 aa24.44■■□□□ 1.5
H3F3B-206ENST00000587560 UNC5CLQ8IV45 518 aa24.44■■□□□ 1.5
H3F3B-206ENST00000587560 WNK3Q9BYP7 1800 aa24.43■■□□□ 1.5
H3F3B-206ENST00000587560 LARP1Q6PKG0 1096 aaKnown RBP24.43■■□□□ 1.5
H3F3B-206ENST00000587560 CARD10Q9BWT7 1032 aa24.42■■□□□ 1.5
H3F3B-206ENST00000587560 ADAMTS8Q9UP79 889 aa24.42■■□□□ 1.5
H3F3B-206ENST00000587560 RSPH6AQ9H0K4 717 aa24.4■■□□□ 1.5
H3F3B-206ENST00000587560 U2SURPO15042 1029 aaKnown RBP24.39■■□□□ 1.49
H3F3B-206ENST00000587560 EVA1CP58658 441 aa24.39■■□□□ 1.49
H3F3B-206ENST00000587560 VPS72Q15906 364 aa24.39■■□□□ 1.49
H3F3B-206ENST00000587560 AEBP1Q8IUX7 1158 aa24.39■■□□□ 1.49
H3F3B-206ENST00000587560 STRN4Q9NRL3 753 aa24.39■■□□□ 1.49
H3F3B-206ENST00000587560 SPATA31A5Q5VU36 1347 aa24.38■■□□□ 1.49
H3F3B-206ENST00000587560 SPATA31A7Q8IWB4 1347 aa24.38■■□□□ 1.49
H3F3B-206ENST00000587560 FCHSD2O94868 740 aa24.38■■□□□ 1.49
H3F3B-206ENST00000587560 U2AF1L5P0DN76 240 aaPredicted RBP24.38■■□□□ 1.49
H3F3B-206ENST00000587560 U2AF1Q01081 240 aaKnown RBP eCLIP24.38■■□□□ 1.49
H3F3B-206ENST00000587560 PLEKHG2Q9H7P9 1386 aa24.38■■□□□ 1.49
H3F3B-206ENST00000587560 SPATA31A1Q5TZJ5 1347 aa24.37■■□□□ 1.49
H3F3B-206ENST00000587560 DISP2A7MBM2 1401 aa24.37■■□□□ 1.49
H3F3B-206ENST00000587560 SENP3-EIF4A1A0A087X0R7 540 aa24.37■■□□□ 1.49
H3F3B-206ENST00000587560 CSB-PGBD3P0DP91 1061 aa24.37■■□□□ 1.49
H3F3B-206ENST00000587560 WDR43Q15061 677 aaKnown RBP eCLIP24.37■■□□□ 1.49
H3F3B-206ENST00000587560 SULT6B1Q6IMI4 303 aa24.37■■□□□ 1.49
H3F3B-206ENST00000587560 PLEKHF1Q96S99 279 aa24.37■■□□□ 1.49
H3F3B-206ENST00000587560 NLRP2Q9NX02 1062 aa24.37■■□□□ 1.49
H3F3B-206ENST00000587560 GLI3P10071 1580 aa24.37■■□□□ 1.49
H3F3B-206ENST00000587560 TOM1L2Q6ZVM7 507 aa24.36■■□□□ 1.49
H3F3B-206ENST00000587560 USHBP1Q8N6Y0 703 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms