RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 SLIT3O75094 1523 aa17.84■□□□□ 0.45
DNMT1-205ENST00000585920 NSD2O96028 1365 aa17.84■□□□□ 0.45
DNMT1-205ENST00000585920 CC2D1BQ5T0F9 858 aaKnown RBP17.84■□□□□ 0.45
DNMT1-205ENST00000585920 ARHGEF25Q86VW2 580 aa17.84■□□□□ 0.45
DNMT1-205ENST00000585920 FNBP4Q8N3X1 1017 aaPredicted RBP17.84■□□□□ 0.45
DNMT1-205ENST00000585920 CPDO75976 1380 aa17.83■□□□□ 0.45
DNMT1-205ENST00000585920 AFF2P51816 1311 aa17.83■□□□□ 0.44
DNMT1-205ENST00000585920 TNNT2P45379 298 aaPredicted RBP17.83■□□□□ 0.44
DNMT1-205ENST00000585920 FBLN1P23142 703 aa17.82■□□□□ 0.44
DNMT1-205ENST00000585920 ZNF772Q68DY9 489 aaPredicted RBP17.82■□□□□ 0.44
DNMT1-205ENST00000585920 BTG4Q9NY30 223 aa17.82■□□□□ 0.44
DNMT1-205ENST00000585920 USP21Q9UK80 565 aa17.82■□□□□ 0.44
DNMT1-205ENST00000585920 PHRF1Q9P1Y6 1649 aaKnown RBP17.8■□□□□ 0.44
DNMT1-205ENST00000585920 DSG3P32926 999 aa17.8■□□□□ 0.44
DNMT1-205ENST00000585920 AMPHP49418 695 aa17.8■□□□□ 0.44
DNMT1-205ENST00000585920 EVA1CP58658 441 aa17.8■□□□□ 0.44
DNMT1-205ENST00000585920 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
DNMT1-205ENST00000585920 ABCA3Q99758 1704 aa17.79■□□□□ 0.44
DNMT1-205ENST00000585920 RRS1Q15050 365 aaKnown RBP17.79■□□□□ 0.44
DNMT1-205ENST00000585920 UNC5CLQ8IV45 518 aa17.79■□□□□ 0.44
DNMT1-205ENST00000585920 AATKQ6ZMQ8 1374 aa17.79■□□□□ 0.44
DNMT1-205ENST00000585920 CRYBG1Q9Y4K1 1723 aa17.78■□□□□ 0.44
DNMT1-205ENST00000585920 MAP3K19Q56UN5 1328 aa17.78■□□□□ 0.44
DNMT1-205ENST00000585920 NFAT5O94916 1531 aa17.77■□□□□ 0.44
DNMT1-205ENST00000585920 USP54Q70EL1 1684 aa17.77■□□□□ 0.44
DNMT1-205ENST00000585920 KIF20BQ96Q89 1820 aa17.77■□□□□ 0.44
DNMT1-205ENST00000585920 PPM1GO15355 546 aaPredicted RBP17.77■□□□□ 0.44
DNMT1-205ENST00000585920 QTRT2Q9H974 415 aaKnown RBP17.77■□□□□ 0.44
DNMT1-205ENST00000585920 STRN4Q9NRL3 753 aa17.77■□□□□ 0.44
DNMT1-205ENST00000585920 RGS17Q9UGC6 210 aaPredicted RBP17.77■□□□□ 0.44
DNMT1-205ENST00000585920 MARF1Q9Y4F3 1742 aaKnown RBP17.77■□□□□ 0.44
DNMT1-205ENST00000585920 SLIT2O94813 1529 aa17.77■□□□□ 0.43
DNMT1-205ENST00000585920 IP6K1Q92551 441 aa17.76■□□□□ 0.43
DNMT1-205ENST00000585920 TRPC5Q9UL62 973 aaPredicted RBP17.76■□□□□ 0.43
DNMT1-205ENST00000585920 AXIN2Q9Y2T1 843 aa17.76■□□□□ 0.43
DNMT1-205ENST00000585920 POLKQ9UBT6 870 aa17.75■□□□□ 0.43
DNMT1-205ENST00000585920 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
DNMT1-205ENST00000585920 BCL9LQ86UU0 1499 aa17.75■□□□□ 0.43
DNMT1-205ENST00000585920 COL14A1Q05707 1796 aaKnown RBP17.74■□□□□ 0.43
DNMT1-205ENST00000585920 HOXC9P31274 260 aa17.74■□□□□ 0.43
DNMT1-205ENST00000585920 EMILIN1Q9Y6C2 1016 aa17.74■□□□□ 0.43
DNMT1-205ENST00000585920 CSB-PGBD3P0DP91 1061 aa17.73■□□□□ 0.43
DNMT1-205ENST00000585920 VASPP50552 380 aaPredicted RBP17.72■□□□□ 0.43
DNMT1-205ENST00000585920 VPS72Q15906 364 aa17.72■□□□□ 0.43
DNMT1-205ENST00000585920 POTEAQ6S8J7 498 aa17.72■□□□□ 0.43
DNMT1-205ENST00000585920 CAMTA1Q9Y6Y1 1673 aa17.71■□□□□ 0.43
DNMT1-205ENST00000585920 KIF24Q5T7B8 1368 aa17.71■□□□□ 0.43
DNMT1-205ENST00000585920 LARP1Q6PKG0 1096 aaKnown RBP17.71■□□□□ 0.43
DNMT1-205ENST00000585920 ANKRD24Q8TF21 1146 aa17.71■□□□□ 0.43
DNMT1-205ENST00000585920 LTV1Q96GA3 475 aaPredicted RBP17.71■□□□□ 0.43
DNMT1-205ENST00000585920 RTL1A6NKG5 1358 aa17.7■□□□□ 0.42
DNMT1-205ENST00000585920 RXRBP28702 533 aa17.7■□□□□ 0.42
DNMT1-205ENST00000585920 HSP90AB2PQ58FF8 381 aa17.7■□□□□ 0.42
DNMT1-205ENST00000585920 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
DNMT1-205ENST00000585920 GJD4Q96KN9 370 aaPredicted RBP17.7■□□□□ 0.42
DNMT1-205ENST00000585920 FLT4P35916 1363 aa17.69■□□□□ 0.42
DNMT1-205ENST00000585920 MTHFSP49914 203 aa17.69■□□□□ 0.42
DNMT1-205ENST00000585920 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
DNMT1-205ENST00000585920 BLMP54132 1417 aaPredicted RBP17.69■□□□□ 0.42
DNMT1-205ENST00000585920 ATRNO75882 1429 aa17.68■□□□□ 0.42
DNMT1-205ENST00000585920 RALBP1Q15311 655 aa17.68■□□□□ 0.42
DNMT1-205ENST00000585920 USP35Q9P2H5 1018 aa17.68■□□□□ 0.42
DNMT1-205ENST00000585920 ANKRD26Q9UPS8 1709 aa17.68■□□□□ 0.42
DNMT1-205ENST00000585920 COL5A2P05997 1499 aaPredicted RBP17.68■□□□□ 0.42
DNMT1-205ENST00000585920 WDR17Q8IZU2 1322 aa17.68■□□□□ 0.42
DNMT1-205ENST00000585920 INSRP06213 1382 aa17.67■□□□□ 0.42
DNMT1-205ENST00000585920 NLRP2Q9NX02 1062 aa17.67■□□□□ 0.42
DNMT1-205ENST00000585920 PLCH1Q4KWH8 1693 aa17.67■□□□□ 0.42
DNMT1-205ENST00000585920 LMO7Q8WWI1 1683 aa17.67■□□□□ 0.42
DNMT1-205ENST00000585920 ERBB3P21860 1342 aa17.67■□□□□ 0.42
DNMT1-205ENST00000585920 SPATA31A5Q5VU36 1347 aa17.67■□□□□ 0.42
DNMT1-205ENST00000585920 SPATA31A7Q8IWB4 1347 aa17.67■□□□□ 0.42
DNMT1-205ENST00000585920 ABCC6O95255 1503 aa17.67■□□□□ 0.42
DNMT1-205ENST00000585920 NWD2Q9ULI1 1742 aa17.67■□□□□ 0.42
DNMT1-205ENST00000585920 PPP2R1AP30153 589 aa17.66■□□□□ 0.42
DNMT1-205ENST00000585920 COL18A1P39060 1754 aa17.66■□□□□ 0.42
DNMT1-205ENST00000585920 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
DNMT1-205ENST00000585920 LTN1O94822 1766 aa17.65■□□□□ 0.42
DNMT1-205ENST00000585920 SPATA31A1Q5TZJ5 1347 aa17.65■□□□□ 0.42
DNMT1-205ENST00000585920 PARD3Q8TEW0 1356 aa17.65■□□□□ 0.42
DNMT1-205ENST00000585920 CRB1P82279 1406 aa17.64■□□□□ 0.42
DNMT1-205ENST00000585920 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
DNMT1-205ENST00000585920 TCP11L2Q8N4U5 519 aa17.64■□□□□ 0.41
DNMT1-205ENST00000585920 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
DNMT1-205ENST00000585920 PRKRIP1Q9H875 184 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-205ENST00000585920 THRAP3Q9Y2W1 955 aaKnown RBP17.63■□□□□ 0.41
DNMT1-205ENST00000585920 ANP32CO43423 234 aa17.62■□□□□ 0.41
DNMT1-205ENST00000585920 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
DNMT1-205ENST00000585920 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
DNMT1-205ENST00000585920 NRAPQ86VF7 1730 aa17.61■□□□□ 0.41
DNMT1-205ENST00000585920 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
DNMT1-205ENST00000585920 MAP2P11137 1827 aaKnown RBP17.61■□□□□ 0.41
DNMT1-205ENST00000585920 A0A0G2JS52 829 aa17.61■□□□□ 0.41
DNMT1-205ENST00000585920 MYT1Q01538 1121 aa17.61■□□□□ 0.41
DNMT1-205ENST00000585920 NBPF6Q5VWK0 638 aa17.6■□□□□ 0.41
DNMT1-205ENST00000585920 BARGINQ6ZT62 677 aa17.6■□□□□ 0.41
DNMT1-205ENST00000585920 NBPF4Q96M43 638 aa17.6■□□□□ 0.41
DNMT1-205ENST00000585920 PEAK1Q9H792 1746 aa17.6■□□□□ 0.41
DNMT1-205ENST00000585920 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
DNMT1-205ENST00000585920 MYBBP1AQ9BQG0 1328 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms