RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 NGLY1Q96IV0 654 aa23.91■■□□□ 1.42
RBFOX1-222ENST00000585867 MTHFSP49914 203 aa23.9■■□□□ 1.42
RBFOX1-222ENST00000585867 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
RBFOX1-222ENST00000585867 HOXC9P31274 260 aa23.89■■□□□ 1.41
RBFOX1-222ENST00000585867 IP6K1Q92551 441 aa23.89■■□□□ 1.41
RBFOX1-222ENST00000585867 COL14A1Q05707 1796 aaKnown RBP23.89■■□□□ 1.41
RBFOX1-222ENST00000585867 PNISRQ8TF01 805 aaKnown RBP23.88■■□□□ 1.41
RBFOX1-222ENST00000585867 AXIN2Q9Y2T1 843 aa23.88■■□□□ 1.41
RBFOX1-222ENST00000585867 BTG4Q9NY30 223 aa23.87■■□□□ 1.41
RBFOX1-222ENST00000585867 KIF24Q5T7B8 1368 aa23.87■■□□□ 1.41
RBFOX1-222ENST00000585867 COL18A1P39060 1754 aa23.87■■□□□ 1.41
RBFOX1-222ENST00000585867 RTL1A6NKG5 1358 aa23.86■■□□□ 1.41
RBFOX1-222ENST00000585867 PEAK1Q9H792 1746 aa23.86■■□□□ 1.41
RBFOX1-222ENST00000585867 FLT4P35916 1363 aa23.86■■□□□ 1.41
RBFOX1-222ENST00000585867 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
RBFOX1-222ENST00000585867 HSP90AB2PQ58FF8 381 aa23.85■■□□□ 1.41
RBFOX1-222ENST00000585867 LMO7Q8WWI1 1683 aa23.84■■□□□ 1.41
RBFOX1-222ENST00000585867 CAMTA1Q9Y6Y1 1673 aa23.84■■□□□ 1.41
RBFOX1-222ENST00000585867 INSRP06213 1382 aa23.84■■□□□ 1.41
RBFOX1-222ENST00000585867 RGPD5Q99666 1765 aa23.84■■□□□ 1.41
RBFOX1-222ENST00000585867 FNBP4Q8N3X1 1017 aaPredicted RBP23.83■■□□□ 1.41
RBFOX1-222ENST00000585867 ABCC6O95255 1503 aa23.83■■□□□ 1.41
RBFOX1-222ENST00000585867 PLCH1Q4KWH8 1693 aa23.83■■□□□ 1.41
RBFOX1-222ENST00000585867 SLIT2O94813 1529 aa23.82■■□□□ 1.4
RBFOX1-222ENST00000585867 BLMP54132 1417 aaPredicted RBP23.82■■□□□ 1.4
RBFOX1-222ENST00000585867 AFF2P51816 1311 aa23.82■■□□□ 1.4
RBFOX1-222ENST00000585867 EVA1CP58658 441 aa23.82■■□□□ 1.4
RBFOX1-222ENST00000585867 LTV1Q96GA3 475 aaPredicted RBP23.82■■□□□ 1.4
RBFOX1-222ENST00000585867 STRN4Q9NRL3 753 aa23.81■■□□□ 1.4
RBFOX1-222ENST00000585867 USP21Q9UK80 565 aa23.81■■□□□ 1.4
RBFOX1-222ENST00000585867 CDK12Q9NYV4 1490 aaPredicted RBP23.81■■□□□ 1.4
RBFOX1-222ENST00000585867 ANKRD24Q8TF21 1146 aa23.8■■□□□ 1.4
RBFOX1-222ENST00000585867 UNC5CLQ8IV45 518 aa23.79■■□□□ 1.4
RBFOX1-222ENST00000585867 CFAP53Q96M91 514 aa23.79■■□□□ 1.4
RBFOX1-222ENST00000585867 NWD2Q9ULI1 1742 aa23.79■■□□□ 1.4
RBFOX1-222ENST00000585867 COL5A2P05997 1499 aaPredicted RBP23.78■■□□□ 1.4
RBFOX1-222ENST00000585867 CSB-PGBD3P0DP91 1061 aa23.78■■□□□ 1.4
RBFOX1-222ENST00000585867 HNRNPUQ00839 825 aaKnown RBP eCLIP23.78■■□□□ 1.4
RBFOX1-222ENST00000585867 BCL9LQ86UU0 1499 aa23.78■■□□□ 1.4
RBFOX1-222ENST00000585867 WDR43Q15061 677 aaKnown RBP eCLIP23.78■■□□□ 1.4
RBFOX1-222ENST00000585867 ERBB3P21860 1342 aa23.77■■□□□ 1.4
RBFOX1-222ENST00000585867 EIF4A2Q14240 407 aaKnown RBP23.76■■□□□ 1.39
RBFOX1-222ENST00000585867 NRAPQ86VF7 1730 aa23.75■■□□□ 1.39
RBFOX1-222ENST00000585867 LARP1Q6PKG0 1096 aaKnown RBP23.75■■□□□ 1.39
RBFOX1-222ENST00000585867 WDR17Q8IZU2 1322 aa23.75■■□□□ 1.39
RBFOX1-222ENST00000585867 DIAPH1O60610 1272 aaKnown RBP23.74■■□□□ 1.39
RBFOX1-222ENST00000585867 TOM1L2Q6ZVM7 507 aa23.74■■□□□ 1.39
RBFOX1-222ENST00000585867 PHF23Q9BUL5 403 aaPredicted RBP23.74■■□□□ 1.39
RBFOX1-222ENST00000585867 IL13P35225 146 aa23.73■■□□□ 1.39
RBFOX1-222ENST00000585867 ZNF772Q68DY9 489 aaPredicted RBP23.73■■□□□ 1.39
RBFOX1-222ENST00000585867 COL3A1P02461 1466 aaPredicted RBP23.72■■□□□ 1.39
RBFOX1-222ENST00000585867 NLRP2Q9NX02 1062 aa23.72■■□□□ 1.39
RBFOX1-222ENST00000585867 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
RBFOX1-222ENST00000585867 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.71■■□□□ 1.39
RBFOX1-222ENST00000585867 VPS72Q15906 364 aa23.7■■□□□ 1.38
RBFOX1-222ENST00000585867 NBPF6Q5VWK0 638 aa23.7■■□□□ 1.38
RBFOX1-222ENST00000585867 NBPF4Q96M43 638 aa23.7■■□□□ 1.38
RBFOX1-222ENST00000585867 TRPC5Q9UL62 973 aaPredicted RBP23.7■■□□□ 1.38
RBFOX1-222ENST00000585867 CRB1P82279 1406 aa23.7■■□□□ 1.38
RBFOX1-222ENST00000585867 ZBED9Q6R2W3 1325 aa23.7■■□□□ 1.38
RBFOX1-222ENST00000585867 QTRT2Q9H974 415 aaKnown RBP23.69■■□□□ 1.38
RBFOX1-222ENST00000585867 EYA1Q99502 592 aa23.69■■□□□ 1.38
RBFOX1-222ENST00000585867 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
RBFOX1-222ENST00000585867 RGS17Q9UGC6 210 aaPredicted RBP23.69■■□□□ 1.38
RBFOX1-222ENST00000585867 NUDCQ9Y266 331 aa23.69■■□□□ 1.38
RBFOX1-222ENST00000585867 CARD10Q9BWT7 1032 aa23.68■■□□□ 1.38
RBFOX1-222ENST00000585867 RGPD2P0DJD1 1756 aa23.68■■□□□ 1.38
RBFOX1-222ENST00000585867 FAM208AQ9UK61 1670 aaKnown RBP23.67■■□□□ 1.38
RBFOX1-222ENST00000585867 SPATA31A5Q5VU36 1347 aa23.67■■□□□ 1.38
RBFOX1-222ENST00000585867 SPATA31A7Q8IWB4 1347 aa23.67■■□□□ 1.38
RBFOX1-222ENST00000585867 ATRNO75882 1429 aa23.66■■□□□ 1.38
RBFOX1-222ENST00000585867 U2SURPO15042 1029 aaKnown RBP23.66■■□□□ 1.38
RBFOX1-222ENST00000585867 SPATA31A1Q5TZJ5 1347 aa23.66■■□□□ 1.38
RBFOX1-222ENST00000585867 USHBP1Q8N6Y0 703 aa23.65■■□□□ 1.38
RBFOX1-222ENST00000585867 ADAMTS8Q9UP79 889 aa23.65■■□□□ 1.38
RBFOX1-222ENST00000585867 GJD4Q96KN9 370 aaPredicted RBP23.65■■□□□ 1.38
RBFOX1-222ENST00000585867 IGSF1Q8N6C5 1336 aa23.64■■□□□ 1.38
RBFOX1-222ENST00000585867 TCP11L2Q8N4U5 519 aa23.63■■□□□ 1.37
RBFOX1-222ENST00000585867 U2AF1L5P0DN76 240 aaPredicted RBP23.61■■□□□ 1.37
RBFOX1-222ENST00000585867 U2AF1Q01081 240 aaKnown RBP eCLIP23.61■■□□□ 1.37
RBFOX1-222ENST00000585867 SULT6B1Q6IMI4 303 aa23.61■■□□□ 1.37
RBFOX1-222ENST00000585867 RGPD1P0DJD0 1748 aa23.61■■□□□ 1.37
RBFOX1-222ENST00000585867 HMOX1P09601 288 aa23.61■■□□□ 1.37
RBFOX1-222ENST00000585867 THRAP3Q9Y2W1 955 aaKnown RBP23.61■■□□□ 1.37
RBFOX1-222ENST00000585867 POTEAQ6S8J7 498 aa23.6■■□□□ 1.37
RBFOX1-222ENST00000585867 AEBP1Q8IUX7 1158 aa23.59■■□□□ 1.37
RBFOX1-222ENST00000585867 GLI3P10071 1580 aa23.59■■□□□ 1.37
RBFOX1-222ENST00000585867 RBM6P78332 1123 aaKnown RBP23.58■■□□□ 1.37
RBFOX1-222ENST00000585867 NCAPD2Q15021 1401 aa23.58■■□□□ 1.36
RBFOX1-222ENST00000585867 FAM98CQ17RN3 349 aaKnown RBP23.57■■□□□ 1.36
RBFOX1-222ENST00000585867 BARGINQ6ZT62 677 aa23.57■■□□□ 1.36
RBFOX1-222ENST00000585867 IL2RBP14784 551 aa23.57■■□□□ 1.36
RBFOX1-222ENST00000585867 RXRBP28702 533 aa23.56■■□□□ 1.36
RBFOX1-222ENST00000585867 RAPGEF4Q8WZA2 1011 aa23.56■■□□□ 1.36
RBFOX1-222ENST00000585867 KDRP35968 1356 aa23.55■■□□□ 1.36
RBFOX1-222ENST00000585867 FCHSD2O94868 740 aa23.54■■□□□ 1.36
RBFOX1-222ENST00000585867 TATP17735 454 aaPredicted RBP23.54■■□□□ 1.36
RBFOX1-222ENST00000585867 NGEFQ8N5V2 710 aa23.54■■□□□ 1.36
RBFOX1-222ENST00000585867 CDCA7Q9BWT1 371 aaPredicted RBP23.53■■□□□ 1.36
RBFOX1-222ENST00000585867 RSPH6AQ9H0K4 717 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms