RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 RLBP1P12271 317 aa14.72□□□□□ -0.05
CDK5RAP3-231ENST00000584063 TERF2IPQ9NYB0 399 aa14.72□□□□□ -0.05
CDK5RAP3-231ENST00000584063 C3P01024 1663 aa14.71□□□□□ -0.05
CDK5RAP3-231ENST00000584063 QRICH2Q9H0J4 1663 aa14.71□□□□□ -0.05
CDK5RAP3-231ENST00000584063 ANAPC15P60006 121 aa14.71□□□□□ -0.05
CDK5RAP3-231ENST00000584063 THEMISQ8N1K5 641 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-231ENST00000584063 CC2D2BQ6DHV5 1058 aa14.71□□□□□ -0.06
CDK5RAP3-231ENST00000584063 POLR3AO14802 1390 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-231ENST00000584063 U2AF1L5P0DN76 240 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-231ENST00000584063 U2AF1Q01081 240 aaKnown RBP eCLIP14.7□□□□□ -0.066e-9■■■□□ 17
CDK5RAP3-231ENST00000584063 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
CDK5RAP3-231ENST00000584063 HDGFL2Q7Z4V5 671 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-231ENST00000584063 RIMS1Q86UR5 1692 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-231ENST00000584063 TULP4Q9NRJ4 1543 aa14.69□□□□□ -0.06
CDK5RAP3-231ENST00000584063 TSR2Q969E8 191 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-231ENST00000584063 A0A1W2PP64 1363 aa14.69□□□□□ -0.06
CDK5RAP3-231ENST00000584063 SHPRHQ149N8 1683 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 U2SURPO15042 1029 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 PTMAP06454 111 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 AMOTL2Q9Y2J4 779 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 SOX12O15370 315 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 KCTD17Q8N5Z5 321 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 RUNDC1Q96C34 613 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 PTPRMP28827 1452 aa14.68□□□□□ -0.06
CDK5RAP3-231ENST00000584063 MYO3AQ8NEV4 1616 aa14.67□□□□□ -0.06
CDK5RAP3-231ENST00000584063 WASLO00401 505 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-231ENST00000584063 RARSP54136 660 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-231ENST00000584063 NUDT16Q96DE0 195 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-231ENST00000584063 PIAS4Q8N2W9 510 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP3-231ENST00000584063 FYB1O15117 783 aa14.65□□□□□ -0.06
CDK5RAP3-231ENST00000584063 MCCP23508 829 aa14.65□□□□□ -0.06
CDK5RAP3-231ENST00000584063 ANKRD36BQ8N2N9 1353 aa14.65□□□□□ -0.06
CDK5RAP3-231ENST00000584063 PCDHB15Q9Y5E8 787 aa14.65□□□□□ -0.06
CDK5RAP3-231ENST00000584063 UBR1Q8IWV7 1749 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ARHGEF28Q8N1W1 1705 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ATAD2Q6PL18 1390 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ABCC11Q96J66 1382 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 GPATCH11Q8N954 259 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 PMFBP1Q8TBY8 1022 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ROBO2Q9HCK4 1378 aa14.63□□□□□ -0.07
CDK5RAP3-231ENST00000584063 USP19O94966 1318 aa14.63□□□□□ -0.07
CDK5RAP3-231ENST00000584063 CFAP53Q96M91 514 aa14.62□□□□□ -0.07
CDK5RAP3-231ENST00000584063 CCDC61Q9Y6R9 512 aa14.62□□□□□ -0.07
CDK5RAP3-231ENST00000584063 IQSEC2Q5JU85 1478 aa14.62□□□□□ -0.07
CDK5RAP3-231ENST00000584063 NME9Q86XW9 330 aa14.62□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ZNF830Q96NB3 372 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-231ENST00000584063 GZF1Q9H116 711 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-231ENST00000584063 KCNA6P17658 529 aa14.6□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ANKLE2Q86XL3 938 aa14.6□□□□□ -0.07
CDK5RAP3-231ENST00000584063 NRXN3Q9Y4C0 1643 aa14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 RGS22Q8NE09 1264 aa14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 DNAJC2Q99543 621 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 NLRP1Q9C000 1473 aa14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 EXOSC9Q06265 439 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 ADAMTS13Q76LX8 1427 aa14.59□□□□□ -0.07
CDK5RAP3-231ENST00000584063 PDE3AQ14432 1141 aa14.58□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PRDM4Q9UKN5 801 aa14.58□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PPIP5K1Q6PFW1 1433 aa14.58□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PLEKHG1Q9ULL1 1385 aa14.58□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PRR36Q9H6K5 1346 aa14.57□□□□□ -0.08
CDK5RAP3-231ENST00000584063 RRS1Q15050 365 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 SETQ01105 290 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 THUMPD2Q9BTF0 503 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 TBX22Q9Y458 520 aa14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 NUTM2GQ5VZR2 741 aa14.56□□□□□ -0.08
CDK5RAP3-231ENST00000584063 MFAP1P55081 439 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PLEKHF1Q96S99 279 aa14.55□□□□□ -0.08
CDK5RAP3-231ENST00000584063 TMPOP42166 694 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-231ENST00000584063 WDR63Q8IWG1 891 aa14.55□□□□□ -0.08
CDK5RAP3-231ENST00000584063 EMILIN1Q9Y6C2 1016 aa14.55□□□□□ -0.08
CDK5RAP3-231ENST00000584063 CD163L1Q9NR16 1453 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 HMOX1P09601 288 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 HSPA2P54652 639 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 COG3Q96JB2 828 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 SMC4Q9NTJ3 1288 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 ACEP12821 1306 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 PTPRUQ92729 1446 aa14.54□□□□□ -0.08
CDK5RAP3-231ENST00000584063 SETD1AO15047 1707 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-231ENST00000584063 ADAMTSL3P82987 1691 aa14.53□□□□□ -0.08
CDK5RAP3-231ENST00000584063 HSP90AA2PQ14568 343 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-231ENST00000584063 NINLQ9Y2I6 1382 aa14.53□□□□□ -0.08
CDK5RAP3-231ENST00000584063 RIPK4P57078 832 aa14.52□□□□□ -0.08
CDK5RAP3-231ENST00000584063 CEP170BQ9Y4F5 1589 aaPredicted RBP14.52□□□□□ -0.08
CDK5RAP3-231ENST00000584063 TBC1D2Q9BYX2 928 aa14.52□□□□□ -0.09
CDK5RAP3-231ENST00000584063 TRIM27P14373 513 aa14.51□□□□□ -0.09
CDK5RAP3-231ENST00000584063 MAPK8IP3Q9UPT6 1336 aa14.51□□□□□ -0.09
CDK5RAP3-231ENST00000584063 DIAPH1O60610 1272 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-231ENST00000584063 ITPRIPQ8IWB1 547 aa14.51□□□□□ -0.09
CDK5RAP3-231ENST00000584063 MYH16Q9H6N6 1097 aa14.51□□□□□ -0.09
CDK5RAP3-231ENST00000584063 ELL2O00472 640 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-231ENST00000584063 POLKQ9UBT6 870 aa14.5□□□□□ -0.09
CDK5RAP3-231ENST00000584063 BECN1Q14457 450 aa14.5□□□□□ -0.09
CDK5RAP3-231ENST00000584063 PHACTR3Q96KR7 559 aa14.5□□□□□ -0.09
CDK5RAP3-231ENST00000584063 NOB1Q9ULX3 412 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-231ENST00000584063 COL3A1P02461 1466 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms