RNA–Protein interactions for RNA: ENST00000583499.1

ARHGDIA-213, Transcript of Rho GDP dissociation inhibitor alpha, humanhuman

TSL 2

Gene ARHGDIA, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGDIA-213ENST00000583499 SPATA31A5Q5VU36 1347 aa33.36■■■□□ 2.93
ARHGDIA-213ENST00000583499 SPATA31A7Q8IWB4 1347 aa33.36■■■□□ 2.93
ARHGDIA-213ENST00000583499 ZBTB7CA1YPR0 619 aa33.36■■■□□ 2.93
ARHGDIA-213ENST00000583499 RGPD2P0DJD1 1756 aa33.36■■■□□ 2.93
ARHGDIA-213ENST00000583499 GGNBP2Q9H3C7 697 aa33.35■■■□□ 2.93
ARHGDIA-213ENST00000583499 FBLN1P23142 703 aa33.34■■■□□ 2.93
ARHGDIA-213ENST00000583499 KCNH5Q8NCM2 988 aa33.34■■■□□ 2.93
ARHGDIA-213ENST00000583499 CCDC7Q96M83 1385 aa33.34■■■□□ 2.93
ARHGDIA-213ENST00000583499 STRN4Q9NRL3 753 aa33.33■■■□□ 2.93
ARHGDIA-213ENST00000583499 LRRC37A3O60309 1634 aa33.32■■■□□ 2.92
ARHGDIA-213ENST00000583499 PARP4Q9UKK3 1724 aaKnown RBP33.32■■■□□ 2.92
ARHGDIA-213ENST00000583499 SPATA31A1Q5TZJ5 1347 aa33.31■■■□□ 2.92
ARHGDIA-213ENST00000583499 WASHC2AQ641Q2 1341 aa33.31■■■□□ 2.92
ARHGDIA-213ENST00000583499 LARP1Q6PKG0 1096 aaKnown RBP33.31■■■□□ 2.92
ARHGDIA-213ENST00000583499 FAM208AQ9UK61 1670 aaKnown RBP33.29■■■□□ 2.92
ARHGDIA-213ENST00000583499 MAP2P11137 1827 aaKnown RBP33.29■■■□□ 2.92
ARHGDIA-213ENST00000583499 CCDC9Q9Y3X0 531 aaKnown RBP33.28■■■□□ 2.92
ARHGDIA-213ENST00000583499 PANK3Q9H999 370 aa33.27■■■□□ 2.92
ARHGDIA-213ENST00000583499 CRB1P82279 1406 aa33.27■■■□□ 2.92
ARHGDIA-213ENST00000583499 COG3Q96JB2 828 aa33.26■■■□□ 2.91
ARHGDIA-213ENST00000583499 MAP3K19Q56UN5 1328 aa33.25■■■□□ 2.91
ARHGDIA-213ENST00000583499 ONECUT3O60422 494 aaPredicted RBP33.24■■■□□ 2.91
ARHGDIA-213ENST00000583499 FAM98CQ17RN3 349 aaKnown RBP33.24■■■□□ 2.91
ARHGDIA-213ENST00000583499 SEPT12Q8IYM1 358 aa33.21■■■□□ 2.91
ARHGDIA-213ENST00000583499 WDR17Q8IZU2 1322 aa33.21■■■□□ 2.91
ARHGDIA-213ENST00000583499 BLMP54132 1417 aaPredicted RBP33.19■■■□□ 2.9
ARHGDIA-213ENST00000583499 ERBB3P21860 1342 aa33.19■■■□□ 2.9
ARHGDIA-213ENST00000583499 DISP2A7MBM2 1401 aa33.19■■■□□ 2.9
ARHGDIA-213ENST00000583499 RRS1Q15050 365 aaKnown RBP33.18■■■□□ 2.9
ARHGDIA-213ENST00000583499 USP35Q9P2H5 1018 aa33.17■■■□□ 2.9
ARHGDIA-213ENST00000583499 CGNL1Q0VF96 1302 aa33.17■■■□□ 2.9
ARHGDIA-213ENST00000583499 RTL1A6NKG5 1358 aa33.16■■■□□ 2.9
ARHGDIA-213ENST00000583499 EVA1CP58658 441 aa33.15■■■□□ 2.9
ARHGDIA-213ENST00000583499 SHANK3Q9BYB0 1731 aa33.14■■■□□ 2.89
ARHGDIA-213ENST00000583499 TNS1Q9HBL0 1735 aaKnown RBP33.14■■■□□ 2.89
ARHGDIA-213ENST00000583499 HOXC9P31274 260 aa33.12■■■□□ 2.89
ARHGDIA-213ENST00000583499 BARGINQ6ZT62 677 aa33.11■■■□□ 2.89
ARHGDIA-213ENST00000583499 IP6K1Q92551 441 aa33.11■■■□□ 2.89
ARHGDIA-213ENST00000583499 NSD2O96028 1365 aa33.1■■■□□ 2.89
ARHGDIA-213ENST00000583499 AMER1Q5JTC6 1135 aaPredicted RBP33.1■■■□□ 2.89
ARHGDIA-213ENST00000583499 TCP11L2Q8N4U5 519 aa33.1■■■□□ 2.89
ARHGDIA-213ENST00000583499 UPF1Q92900 1129 aaKnown RBP eCLIP33.1■■■□□ 2.89
ARHGDIA-213ENST00000583499 SMG6Q86US8 1419 aaKnown RBP33.1■■■□□ 2.89
ARHGDIA-213ENST00000583499 PER1O15534 1290 aaPredicted RBP33.09■■■□□ 2.89
ARHGDIA-213ENST00000583499 ANKRD24Q8TF21 1146 aa33.09■■■□□ 2.89
ARHGDIA-213ENST00000583499 EMILIN1Q9Y6C2 1016 aa33.09■■■□□ 2.89
ARHGDIA-213ENST00000583499 TOM1L2Q6ZVM7 507 aa33.07■■■□□ 2.88
ARHGDIA-213ENST00000583499 SBF2Q86WG5 1849 aa33.07■■■□□ 2.88
ARHGDIA-213ENST00000583499 FLT4P35916 1363 aa33.05■■■□□ 2.88
ARHGDIA-213ENST00000583499 A0A0G2JS52 829 aa33.04■■■□□ 2.88
ARHGDIA-213ENST00000583499 MYT1Q01538 1121 aa33.04■■■□□ 2.88
ARHGDIA-213ENST00000583499 FAM182BQ5T319 152 aa33.04■■■□□ 2.88
ARHGDIA-213ENST00000583499 CARD10Q9BWT7 1032 aa33.04■■■□□ 2.88
ARHGDIA-213ENST00000583499 RGPD1P0DJD0 1748 aa33.04■■■□□ 2.88
ARHGDIA-213ENST00000583499 THRAP3Q9Y2W1 955 aaKnown RBP33.03■■■□□ 2.88
ARHGDIA-213ENST00000583499 CSB-PGBD3P0DP91 1061 aa33.02■■■□□ 2.88
ARHGDIA-213ENST00000583499 KRT27Q7Z3Y8 459 aa33.02■■■□□ 2.88
ARHGDIA-213ENST00000583499 INSRP06213 1382 aa33.01■■■□□ 2.88
ARHGDIA-213ENST00000583499 KIF24Q5T7B8 1368 aa33.01■■■□□ 2.88
ARHGDIA-213ENST00000583499 AMPHP49418 695 aa33■■■□□ 2.87
ARHGDIA-213ENST00000583499 HSP90AB2PQ58FF8 381 aa33■■■□□ 2.87
ARHGDIA-213ENST00000583499 LTV1Q96GA3 475 aaPredicted RBP33■■■□□ 2.87
ARHGDIA-213ENST00000583499 TNS2Q63HR2 1409 aa33■■■□□ 2.87
ARHGDIA-213ENST00000583499 MEGF6O75095 1541 aa32.99■■■□□ 2.87
ARHGDIA-213ENST00000583499 POLKQ9UBT6 870 aa32.99■■■□□ 2.87
ARHGDIA-213ENST00000583499 TNNT2P45379 298 aaPredicted RBP32.98■■■□□ 2.87
ARHGDIA-213ENST00000583499 NCAPD2Q15021 1401 aa32.98■■■□□ 2.87
ARHGDIA-213ENST00000583499 KNSTRNQ9Y448 316 aa32.97■■■□□ 2.87
ARHGDIA-213ENST00000583499 NLRP2Q9NX02 1062 aa32.95■■■□□ 2.87
ARHGDIA-213ENST00000583499 PKD1L3Q7Z443 1732 aa32.94■■■□□ 2.86
ARHGDIA-213ENST00000583499 NPC1L1Q9UHC9 1359 aa32.93■■■□□ 2.86
ARHGDIA-213ENST00000583499 NBPF6Q5VWK0 638 aa32.89■■■□□ 2.86
ARHGDIA-213ENST00000583499 USHBP1Q8N6Y0 703 aa32.89■■■□□ 2.86
ARHGDIA-213ENST00000583499 NBPF4Q96M43 638 aa32.89■■■□□ 2.86
ARHGDIA-213ENST00000583499 MORC1Q86VD1 984 aa32.88■■■□□ 2.85
ARHGDIA-213ENST00000583499 CC2D1BQ5T0F9 858 aaKnown RBP32.87■■■□□ 2.85
ARHGDIA-213ENST00000583499 NHSQ6T4R5 1651 aa32.87■■■□□ 2.85
ARHGDIA-213ENST00000583499 COL3A1P02461 1466 aaPredicted RBP32.86■■■□□ 2.85
ARHGDIA-213ENST00000583499 DOT1LQ8TEK3 1739 aa32.86■■■□□ 2.85
ARHGDIA-213ENST00000583499 OVOS2A0A0G2JMS6 1433 aa32.85■■■□□ 2.85
ARHGDIA-213ENST00000583499 PPM1GO15355 546 aaPredicted RBP32.85■■■□□ 2.85
ARHGDIA-213ENST00000583499 MARCH10Q8NA82 808 aaPredicted RBP32.84■■■□□ 2.85
ARHGDIA-213ENST00000583499 RREB1Q92766 1687 aa32.82■■■□□ 2.84
ARHGDIA-213ENST00000583499 IL2RBP14784 551 aa32.82■■■□□ 2.84
ARHGDIA-213ENST00000583499 ZEB1P37275 1124 aaPredicted RBP32.82■■■□□ 2.84
ARHGDIA-213ENST00000583499 DDB1Q16531 1140 aa32.82■■■□□ 2.84
ARHGDIA-213ENST00000583499 TOGARAM1Q9Y4F4 1720 aa32.82■■■□□ 2.84
ARHGDIA-213ENST00000583499 EIF4A2Q14240 407 aaKnown RBP32.81■■■□□ 2.84
ARHGDIA-213ENST00000583499 CDCA7Q9BWT1 371 aaPredicted RBP32.8■■■□□ 2.84
ARHGDIA-213ENST00000583499 BCL9O00512 1426 aa32.78■■■□□ 2.84
ARHGDIA-213ENST00000583499 PDE3BQ13370 1112 aa32.78■■■□□ 2.84
ARHGDIA-213ENST00000583499 CNGB1Q14028 1251 aaPredicted RBP32.78■■■□□ 2.84
ARHGDIA-213ENST00000583499 RGPD3A6NKT7 1758 aaPredicted RBP32.77■■■□□ 2.84
ARHGDIA-213ENST00000583499 RGPD4Q7Z3J3 1758 aa32.77■■■□□ 2.84
ARHGDIA-213ENST00000583499 BTAF1O14981 1849 aa32.76■■■□□ 2.83
ARHGDIA-213ENST00000583499 NUP188Q5SRE5 1749 aa32.76■■■□□ 2.83
ARHGDIA-213ENST00000583499 PTF1AQ7RTS3 328 aa32.75■■■□□ 2.83
ARHGDIA-213ENST00000583499 EYA1Q99502 592 aa32.75■■■□□ 2.83
ARHGDIA-213ENST00000583499 DEFB132Q7Z7B7 95 aa32.74■■■□□ 2.83
ARHGDIA-213ENST00000583499 IGSF1Q8N6C5 1336 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms