RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
RFFL-210ENST00000582308 LMO7Q8WWI1 1683 aa12.84□□□□□ -0.35
RFFL-210ENST00000582308 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
RFFL-210ENST00000582308 CCER2I3L3R5 266 aa12.84□□□□□ -0.35
RFFL-210ENST00000582308 ADAMTS2O95450 1211 aa12.84□□□□□ -0.35
RFFL-210ENST00000582308 HSP90AB2PQ58FF8 381 aa12.84□□□□□ -0.35
RFFL-210ENST00000582308 PRDM11Q9NQV5 511 aa12.84□□□□□ -0.35
RFFL-210ENST00000582308 AXIN2Q9Y2T1 843 aa12.84□□□□□ -0.35
RFFL-210ENST00000582308 LRP6O75581 1613 aa12.84□□□□□ -0.35
RFFL-210ENST00000582308 RGPD2P0DJD1 1756 aa12.84□□□□□ -0.35
RFFL-210ENST00000582308 COL14A1Q05707 1796 aaKnown RBP12.84□□□□□ -0.35
RFFL-210ENST00000582308 RTL1A6NKG5 1358 aa12.83□□□□□ -0.36
RFFL-210ENST00000582308 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
RFFL-210ENST00000582308 ABCC6O95255 1503 aa12.83□□□□□ -0.36
RFFL-210ENST00000582308 CFAP53Q96M91 514 aa12.82□□□□□ -0.36
RFFL-210ENST00000582308 PLCH1Q4KWH8 1693 aa12.82□□□□□ -0.36
RFFL-210ENST00000582308 CAMTA1Q9Y6Y1 1673 aa12.82□□□□□ -0.36
RFFL-210ENST00000582308 BLMP54132 1417 aaPredicted RBP12.8□□□□□ -0.36
RFFL-210ENST00000582308 IL13P35225 146 aa12.8□□□□□ -0.36
RFFL-210ENST00000582308 EIF4A2Q14240 407 aaKnown RBP12.8□□□□□ -0.36
RFFL-210ENST00000582308 RGPD1P0DJD0 1748 aa12.79□□□□□ -0.36
RFFL-210ENST00000582308 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
RFFL-210ENST00000582308 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
RFFL-210ENST00000582308 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
RFFL-210ENST00000582308 LTV1Q96GA3 475 aaPredicted RBP12.79□□□□□ -0.36
RFFL-210ENST00000582308 ANKRD24Q8TF21 1146 aa12.78□□□□□ -0.36
RFFL-210ENST00000582308 BTG4Q9NY30 223 aa12.78□□□□□ -0.36
RFFL-210ENST00000582308 NRAPQ86VF7 1730 aa12.78□□□□□ -0.36
RFFL-210ENST00000582308 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
RFFL-210ENST00000582308 C8orf37Q96NL8 207 aa12.77□□□□□ -0.37
RFFL-210ENST00000582308 ERBB3P21860 1342 aa12.77□□□□□ -0.37
RFFL-210ENST00000582308 SLIT2O94813 1529 aa12.77□□□□□ -0.37
RFFL-210ENST00000582308 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.37
RFFL-210ENST00000582308 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
RFFL-210ENST00000582308 NGLY1Q96IV0 654 aa12.76□□□□□ -0.37
RFFL-210ENST00000582308 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
RFFL-210ENST00000582308 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
RFFL-210ENST00000582308 NBPF6Q5VWK0 638 aa12.75□□□□□ -0.37
RFFL-210ENST00000582308 FNBP4Q8N3X1 1017 aaPredicted RBP12.75□□□□□ -0.37
RFFL-210ENST00000582308 NBPF4Q96M43 638 aa12.75□□□□□ -0.37
RFFL-210ENST00000582308 EYA1Q99502 592 aa12.75□□□□□ -0.37
RFFL-210ENST00000582308 STRN4Q9NRL3 753 aa12.75□□□□□ -0.37
RFFL-210ENST00000582308 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
RFFL-210ENST00000582308 NUDCQ9Y266 331 aa12.75□□□□□ -0.37
RFFL-210ENST00000582308 BCL9LQ86UU0 1499 aa12.74□□□□□ -0.37
RFFL-210ENST00000582308 WDR17Q8IZU2 1322 aa12.74□□□□□ -0.37
RFFL-210ENST00000582308 U2AF1L5P0DN76 240 aaPredicted RBP12.74□□□□□ -0.37
RFFL-210ENST00000582308 EVA1CP58658 441 aa12.74□□□□□ -0.37
RFFL-210ENST00000582308 U2AF1Q01081 240 aaKnown RBP eCLIP12.74□□□□□ -0.37
RFFL-210ENST00000582308 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
RFFL-210ENST00000582308 IGSF1Q8N6C5 1336 aa12.73□□□□□ -0.37
RFFL-210ENST00000582308 CSB-PGBD3P0DP91 1061 aa12.73□□□□□ -0.37
RFFL-210ENST00000582308 WDR43Q15061 677 aaKnown RBP eCLIP12.73□□□□□ -0.37
RFFL-210ENST00000582308 LARP1Q6PKG0 1096 aaKnown RBP12.73□□□□□ -0.37
RFFL-210ENST00000582308 AEBP1Q8IUX7 1158 aa12.73□□□□□ -0.37
RFFL-210ENST00000582308 FAM9BQ8IZU0 186 aa12.73□□□□□ -0.37
RFFL-210ENST00000582308 NCAPD2Q15021 1401 aa12.72□□□□□ -0.37
RFFL-210ENST00000582308 AFF2P51816 1311 aa12.72□□□□□ -0.37
RFFL-210ENST00000582308 HMOX1P09601 288 aa12.72□□□□□ -0.37
RFFL-210ENST00000582308 UNC5CLQ8IV45 518 aa12.72□□□□□ -0.37
RFFL-210ENST00000582308 USHBP1Q8N6Y0 703 aa12.72□□□□□ -0.37
RFFL-210ENST00000582308 NLRP2Q9NX02 1062 aa12.72□□□□□ -0.37
RFFL-210ENST00000582308 SULT6B1Q6IMI4 303 aa12.71□□□□□ -0.37
RFFL-210ENST00000582308 TOM1L2Q6ZVM7 507 aa12.71□□□□□ -0.37
RFFL-210ENST00000582308 CARD10Q9BWT7 1032 aa12.71□□□□□ -0.37
RFFL-210ENST00000582308 USP21Q9UK80 565 aa12.71□□□□□ -0.37
RFFL-210ENST00000582308 CRB1P82279 1406 aa12.71□□□□□ -0.38
RFFL-210ENST00000582308 KDRP35968 1356 aa12.7□□□□□ -0.38
RFFL-210ENST00000582308 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
RFFL-210ENST00000582308 FCHSD2O94868 740 aa12.69□□□□□ -0.38
RFFL-210ENST00000582308 WNK3Q9BYP7 1800 aa12.69□□□□□ -0.38
RFFL-210ENST00000582308 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
RFFL-210ENST00000582308 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
RFFL-210ENST00000582308 VPS72Q15906 364 aa12.68□□□□□ -0.38
RFFL-210ENST00000582308 CCDC146Q8IYE0 955 aa12.68□□□□□ -0.38
RFFL-210ENST00000582308 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
RFFL-210ENST00000582308 DLG5Q8TDM6 1919 aa12.68□□□□□ -0.38
RFFL-210ENST00000582308 SPATA31A1Q5TZJ5 1347 aa12.67□□□□□ -0.38
RFFL-210ENST00000582308 PRKAR2BP31323 418 aa12.67□□□□□ -0.38
RFFL-210ENST00000582308 USP35Q9P2H5 1018 aa12.67□□□□□ -0.38
RFFL-210ENST00000582308 ATRNO75882 1429 aa12.67□□□□□ -0.38
RFFL-210ENST00000582308 RUNDC1Q96C34 613 aa12.66□□□□□ -0.38
RFFL-210ENST00000582308 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
RFFL-210ENST00000582308 CCDC9Q9Y3X0 531 aaKnown RBP12.66□□□□□ -0.38
RFFL-210ENST00000582308 MEGF6O75095 1541 aa12.66□□□□□ -0.38
RFFL-210ENST00000582308 PARP4Q9UKK3 1724 aaKnown RBP12.65□□□□□ -0.38
RFFL-210ENST00000582308 TCP11L2Q8N4U5 519 aa12.65□□□□□ -0.38
RFFL-210ENST00000582308 PNNQ9H307 717 aaKnown RBP12.65□□□□□ -0.38
RFFL-210ENST00000582308 QTRT2Q9H974 415 aaKnown RBP12.65□□□□□ -0.38
RFFL-210ENST00000582308 GLI3P10071 1580 aa12.64□□□□□ -0.39
RFFL-210ENST00000582308 DISP2A7MBM2 1401 aa12.64□□□□□ -0.39
RFFL-210ENST00000582308 RAPGEF4Q8WZA2 1011 aa12.64□□□□□ -0.39
RFFL-210ENST00000582308 RGS17Q9UGC6 210 aaPredicted RBP12.64□□□□□ -0.39
RFFL-210ENST00000582308 TRPC5Q9UL62 973 aaPredicted RBP12.64□□□□□ -0.39
RFFL-210ENST00000582308 THRAP3Q9Y2W1 955 aaKnown RBP12.64□□□□□ -0.39
RFFL-210ENST00000582308 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
RFFL-210ENST00000582308 SHANK3Q9BYB0 1731 aa12.64□□□□□ -0.39
RFFL-210ENST00000582308 VIRMAQ69YN4 1812 aaKnown RBP12.64□□□□□ -0.39
RFFL-210ENST00000582308 SENP3-EIF4A1A0A087X0R7 540 aa12.63□□□□□ -0.39
RFFL-210ENST00000582308 APAF1O14727 1248 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms