RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-220ENST00000581160 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
CDK5RAP3-220ENST00000581160 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.44
CDK5RAP3-220ENST00000581160 IL13P35225 146 aa12.27□□□□□ -0.45
CDK5RAP3-220ENST00000581160 CHRNA2Q15822 529 aa12.27□□□□□ -0.45
CDK5RAP3-220ENST00000581160 PRDM11Q9NQV5 511 aa12.27□□□□□ -0.45
CDK5RAP3-220ENST00000581160 NUDCQ9Y266 331 aa12.27□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ABCA3Q99758 1704 aa12.26□□□□□ -0.45
CDK5RAP3-220ENST00000581160 PEAK1Q9H792 1746 aa12.26□□□□□ -0.45
CDK5RAP3-220ENST00000581160 LTN1O94822 1766 aa12.26□□□□□ -0.45
CDK5RAP3-220ENST00000581160 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-220ENST00000581160 COL18A1P39060 1754 aa12.25□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ADAMTS2O95450 1211 aa12.25□□□□□ -0.45
CDK5RAP3-220ENST00000581160 BLMP54132 1417 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-220ENST00000581160 COL3A1P02461 1466 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ABCC6O95255 1503 aa12.24□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ANKRD24Q8TF21 1146 aa12.24□□□□□ -0.45
CDK5RAP3-220ENST00000581160 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDK5RAP3-220ENST00000581160 LTV1Q96GA3 475 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ADAMTS8Q9UP79 889 aa12.23□□□□□ -0.45
CDK5RAP3-220ENST00000581160 U2SURPO15042 1029 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 U2AF1L5P0DN76 240 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 EVA1CP58658 441 aa12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 U2AF1Q01081 240 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 FAM9BQ8IZU0 186 aa12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 EYA1Q99502 592 aa12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 BTG4Q9NY30 223 aa12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 COL14A1Q05707 1796 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 CAMTA1Q9Y6Y1 1673 aa12.22□□□□□ -0.45
CDK5RAP3-220ENST00000581160 ERBB3P21860 1342 aa12.21□□□□□ -0.45
CDK5RAP3-220ENST00000581160 NGLY1Q96IV0 654 aa12.21□□□□□ -0.45
CDK5RAP3-220ENST00000581160 RGPD5Q99666 1765 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 LMO7Q8WWI1 1683 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 FCHSD2O94868 740 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 CSB-PGBD3P0DP91 1061 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 MEX3CQ5U5Q3 659 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 NBPF6Q5VWK0 638 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 NBPF4Q96M43 638 aa12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 PNNQ9H307 717 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-220ENST00000581160 LRP6O75581 1613 aa12.19□□□□□ -0.46
CDK5RAP3-220ENST00000581160 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
CDK5RAP3-220ENST00000581160 IGSF1Q8N6C5 1336 aa12.19□□□□□ -0.46
CDK5RAP3-220ENST00000581160 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
CDK5RAP3-220ENST00000581160 C8orf37Q96NL8 207 aa12.19□□□□□ -0.46
CDK5RAP3-220ENST00000581160 SLIT2O94813 1529 aa12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 LARP1Q6PKG0 1096 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 UNC5CLQ8IV45 518 aa12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 CARD10Q9BWT7 1032 aa12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 NLRP2Q9NX02 1062 aa12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 COL5A2P05997 1499 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-220ENST00000581160 HMOX1P09601 288 aa12.17□□□□□ -0.46
CDK5RAP3-220ENST00000581160 TOM1L2Q6ZVM7 507 aa12.17□□□□□ -0.46
CDK5RAP3-220ENST00000581160 PLEKHF1Q96S99 279 aa12.17□□□□□ -0.46
CDK5RAP3-220ENST00000581160 RSPH6AQ9H0K4 717 aa12.17□□□□□ -0.46
CDK5RAP3-220ENST00000581160 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
CDK5RAP3-220ENST00000581160 USP21Q9UK80 565 aa12.16□□□□□ -0.46
CDK5RAP3-220ENST00000581160 RGPD1P0DJD0 1748 aa12.16□□□□□ -0.46
CDK5RAP3-220ENST00000581160 KDRP35968 1356 aa12.16□□□□□ -0.46
CDK5RAP3-220ENST00000581160 BCL9LQ86UU0 1499 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 NWD2Q9ULI1 1742 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 CRB1P82279 1406 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 NCAPD2Q15021 1401 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 AEBP1Q8IUX7 1158 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
CDK5RAP3-220ENST00000581160 PLCH1Q4KWH8 1693 aa12.14□□□□□ -0.47
CDK5RAP3-220ENST00000581160 PRKAR2BP31323 418 aa12.14□□□□□ -0.47
CDK5RAP3-220ENST00000581160 VPS72Q15906 364 aa12.14□□□□□ -0.47
CDK5RAP3-220ENST00000581160 ILDR1Q86SU0 546 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-220ENST00000581160 AFF2P51816 1311 aa12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 FAM208AQ9UK61 1670 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 RGPD2P0DJD1 1756 aa12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 NEFMP07197 916 aa12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 CCDC146Q8IYE0 955 aa12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 THRAP3Q9Y2W1 955 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-220ENST00000581160 SPATA31A1Q5TZJ5 1347 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 SPATA31A5Q5VU36 1347 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 SPATA31A7Q8IWB4 1347 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 NRAPQ86VF7 1730 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 TATP17735 454 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 TCP11L2Q8N4U5 519 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 PHACTR3Q96KR7 559 aa12.12□□□□□ -0.47
CDK5RAP3-220ENST00000581160 APAF1O14727 1248 aa12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 PLEKHO1Q53GL0 409 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 CCDC9Q9Y3X0 531 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
CDK5RAP3-220ENST00000581160 PLEKHG2Q9H7P9 1386 aa12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 IL2RBP14784 551 aa12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 CDCA7Q9BWT1 371 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-220ENST00000581160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.471e-11■■□□□ 11.5
CDK5RAP3-220ENST00000581160 USP35Q9P2H5 1018 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms