RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 HOXC9P31274 260 aa15.76■□□□□ 0.11
SNORD3C-201ENST00000580533 NUDCQ9Y266 331 aa15.76■□□□□ 0.11
SNORD3C-201ENST00000580533 INSRP06213 1382 aa15.75■□□□□ 0.11
SNORD3C-201ENST00000580533 CCER2I3L3R5 266 aa15.75■□□□□ 0.11
SNORD3C-201ENST00000580533 ILDR1Q86SU0 546 aaPredicted RBP15.75■□□□□ 0.11
SNORD3C-201ENST00000580533 EVA1CP58658 441 aa15.74■□□□□ 0.11
SNORD3C-201ENST00000580533 NGLY1Q96IV0 654 aa15.74■□□□□ 0.11
SNORD3C-201ENST00000580533 C8orf37Q96NL8 207 aa15.74■□□□□ 0.11
SNORD3C-201ENST00000580533 DIAPH1O60610 1272 aaKnown RBP15.73■□□□□ 0.11
SNORD3C-201ENST00000580533 CSB-PGBD3P0DP91 1061 aa15.73■□□□□ 0.11
SNORD3C-201ENST00000580533 FAM83GA6ND36 823 aa15.72■□□□□ 0.11
SNORD3C-201ENST00000580533 CHRNA2Q15822 529 aa15.72■□□□□ 0.11
SNORD3C-201ENST00000580533 BTG4Q9NY30 223 aa15.72■□□□□ 0.11
SNORD3C-201ENST00000580533 LRP6O75581 1613 aa15.72■□□□□ 0.11
SNORD3C-201ENST00000580533 NWD2Q9ULI1 1742 aa15.71■□□□□ 0.11
SNORD3C-201ENST00000580533 FBLN1P23142 703 aa15.71■□□□□ 0.11
SNORD3C-201ENST00000580533 MRS2Q9HD23 443 aa15.71■□□□□ 0.11
SNORD3C-201ENST00000580533 ERBB3P21860 1342 aa15.7■□□□□ 0.1
SNORD3C-201ENST00000580533 LMO7Q8WWI1 1683 aa15.7■□□□□ 0.1
SNORD3C-201ENST00000580533 FAM208AQ9UK61 1670 aaKnown RBP15.7■□□□□ 0.1
SNORD3C-201ENST00000580533 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.17e-84■■■■■ 36.9
SNORD3C-201ENST00000580533 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
SNORD3C-201ENST00000580533 ANKRD24Q8TF21 1146 aa15.7■□□□□ 0.1
SNORD3C-201ENST00000580533 PLCH1Q4KWH8 1693 aa15.7■□□□□ 0.1
SNORD3C-201ENST00000580533 SLIT2O94813 1529 aa15.69■□□□□ 0.1
SNORD3C-201ENST00000580533 PEAK1Q9H792 1746 aa15.69■□□□□ 0.1
SNORD3C-201ENST00000580533 FNBP4Q8N3X1 1017 aaPredicted RBP15.69■□□□□ 0.1
SNORD3C-201ENST00000580533 PNNQ9H307 717 aaKnown RBP15.69■□□□□ 0.1
SNORD3C-201ENST00000580533 COL5A2P05997 1499 aaPredicted RBP15.69■□□□□ 0.1
SNORD3C-201ENST00000580533 WDR17Q8IZU2 1322 aa15.68■□□□□ 0.1
SNORD3C-201ENST00000580533 COL18A1P39060 1754 aa15.68■□□□□ 0.1
SNORD3C-201ENST00000580533 ZNF772Q68DY9 489 aaPredicted RBP15.68■□□□□ 0.1
SNORD3C-201ENST00000580533 UNC5CLQ8IV45 518 aa15.68■□□□□ 0.1
SNORD3C-201ENST00000580533 USP21Q9UK80 565 aa15.68■□□□□ 0.1
SNORD3C-201ENST00000580533 NEFMP07197 916 aa15.67■□□□□ 0.1
SNORD3C-201ENST00000580533 EIF4A2Q14240 407 aaKnown RBP15.67■□□□□ 0.1
SNORD3C-201ENST00000580533 TOM1L2Q6ZVM7 507 aa15.67■□□□□ 0.1
SNORD3C-201ENST00000580533 MIER1Q8N108 512 aa15.67■□□□□ 0.1
SNORD3C-201ENST00000580533 LTV1Q96GA3 475 aaPredicted RBP15.67■□□□□ 0.1
SNORD3C-201ENST00000580533 STRN4Q9NRL3 753 aa15.67■□□□□ 0.1
SNORD3C-201ENST00000580533 AXIN2Q9Y2T1 843 aa15.67■□□□□ 0.1
SNORD3C-201ENST00000580533 CAMTA1Q9Y6Y1 1673 aa15.67■□□□□ 0.1
SNORD3C-201ENST00000580533 COL3A1P02461 1466 aaPredicted RBP15.66■□□□□ 0.1
SNORD3C-201ENST00000580533 U2SURPO15042 1029 aaKnown RBP15.66■□□□□ 0.1
SNORD3C-201ENST00000580533 NLRP2Q9NX02 1062 aa15.66■□□□□ 0.1
SNORD3C-201ENST00000580533 CRB1P82279 1406 aa15.66■□□□□ 0.1
SNORD3C-201ENST00000580533 AFF2P51816 1311 aa15.66■□□□□ 0.1
SNORD3C-201ENST00000580533 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.65■□□□□ 0.1
SNORD3C-201ENST00000580533 IL13P35225 146 aa15.65■□□□□ 0.1
SNORD3C-201ENST00000580533 TRPC5Q9UL62 973 aaPredicted RBP15.65■□□□□ 0.1
SNORD3C-201ENST00000580533 PLEKHG2Q9H7P9 1386 aa15.64■□□□□ 0.09
SNORD3C-201ENST00000580533 U2AF1L5P0DN76 240 aaPredicted RBP15.64■□□□□ 0.09
SNORD3C-201ENST00000580533 U2AF1Q01081 240 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNORD3C-201ENST00000580533 VPS72Q15906 364 aa15.64■□□□□ 0.09
SNORD3C-201ENST00000580533 CARD10Q9BWT7 1032 aa15.64■□□□□ 0.09
SNORD3C-201ENST00000580533 THRAP3Q9Y2W1 955 aaKnown RBP15.64■□□□□ 0.09
SNORD3C-201ENST00000580533 CCDC9Q9Y3X0 531 aaKnown RBP15.64■□□□□ 0.09
SNORD3C-201ENST00000580533 CDCA7Q9BWT1 371 aaPredicted RBP15.63■□□□□ 0.09
SNORD3C-201ENST00000580533 IGSF1Q8N6C5 1336 aa15.63■□□□□ 0.09
SNORD3C-201ENST00000580533 NRAPQ86VF7 1730 aa15.63■□□□□ 0.09
SNORD3C-201ENST00000580533 BCL9LQ86UU0 1499 aa15.62■□□□□ 0.09
SNORD3C-201ENST00000580533 RGPD5Q99666 1765 aa15.62■□□□□ 0.09
SNORD3C-201ENST00000580533 FCHSD2O94868 740 aa15.61■□□□□ 0.09
SNORD3C-201ENST00000580533 LARP1Q6PKG0 1096 aaKnown RBP15.61■□□□□ 0.09
SNORD3C-201ENST00000580533 RAPGEF4Q8WZA2 1011 aa15.61■□□□□ 0.09
SNORD3C-201ENST00000580533 EYA1Q99502 592 aa15.61■□□□□ 0.09
SNORD3C-201ENST00000580533 TCP11L2Q8N4U5 519 aa15.6■□□□□ 0.09
SNORD3C-201ENST00000580533 NBPF6Q5VWK0 638 aa15.59■□□□□ 0.09
SNORD3C-201ENST00000580533 SULT6B1Q6IMI4 303 aa15.59■□□□□ 0.09
SNORD3C-201ENST00000580533 PNISRQ8TF01 805 aaKnown RBP15.59■□□□□ 0.09
SNORD3C-201ENST00000580533 NBPF4Q96M43 638 aa15.59■□□□□ 0.09
SNORD3C-201ENST00000580533 SPATA31A5Q5VU36 1347 aa15.59■□□□□ 0.09
SNORD3C-201ENST00000580533 SPATA31A7Q8IWB4 1347 aa15.59■□□□□ 0.09
SNORD3C-201ENST00000580533 MAPK8IP3Q9UPT6 1336 aa15.59■□□□□ 0.09
SNORD3C-201ENST00000580533 KDRP35968 1356 aa15.59■□□□□ 0.09
SNORD3C-201ENST00000580533 ATRNO75882 1429 aa15.59■□□□□ 0.09
SNORD3C-201ENST00000580533 NCAPD2Q15021 1401 aa15.59■□□□□ 0.09
SNORD3C-201ENST00000580533 RGPD1P0DJD0 1748 aa15.58■□□□□ 0.08
SNORD3C-201ENST00000580533 TATP17735 454 aaPredicted RBP15.58■□□□□ 0.08
SNORD3C-201ENST00000580533 QTRT2Q9H974 415 aaKnown RBP15.58■□□□□ 0.08
SNORD3C-201ENST00000580533 SPATA31A1Q5TZJ5 1347 aa15.58■□□□□ 0.08
SNORD3C-201ENST00000580533 IL2RBP14784 551 aa15.57■□□□□ 0.08
SNORD3C-201ENST00000580533 BARGINQ6ZT62 677 aa15.57■□□□□ 0.08
SNORD3C-201ENST00000580533 USP35Q9P2H5 1018 aa15.57■□□□□ 0.08
SNORD3C-201ENST00000580533 AMOTQ4VCS5 1084 aa15.56■□□□□ 0.08
SNORD3C-201ENST00000580533 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
SNORD3C-201ENST00000580533 GJD4Q96KN9 370 aaPredicted RBP15.56■□□□□ 0.08
SNORD3C-201ENST00000580533 HMOX1P09601 288 aa15.55■□□□□ 0.08
SNORD3C-201ENST00000580533 CCDC184Q52MB2 194 aa15.55■□□□□ 0.08
SNORD3C-201ENST00000580533 ADAMTS8Q9UP79 889 aa15.55■□□□□ 0.08
SNORD3C-201ENST00000580533 SPG7Q9UQ90 795 aa15.55■□□□□ 0.08
SNORD3C-201ENST00000580533 PARP4Q9UKK3 1724 aaKnown RBP15.54■□□□□ 0.08
SNORD3C-201ENST00000580533 CENPBP07199 599 aaPredicted RBP15.54■□□□□ 0.08
SNORD3C-201ENST00000580533 PRKAR2BP31323 418 aa15.54■□□□□ 0.08
SNORD3C-201ENST00000580533 RBM6P78332 1123 aaKnown RBP15.54■□□□□ 0.08
SNORD3C-201ENST00000580533 PLEKHO1Q53GL0 409 aaPredicted RBP15.54■□□□□ 0.08
SNORD3C-201ENST00000580533 USHBP1Q8N6Y0 703 aa15.54■□□□□ 0.08
SNORD3C-201ENST00000580533 RUNDC1Q96C34 613 aa15.54■□□□□ 0.08
SNORD3C-201ENST00000580533 RSPH6AQ9H0K4 717 aa15.54■□□□□ 0.08
SNORD3C-201ENST00000580533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms