RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 OVOS2Q6IE36 1432 aa15.16■□□□□ 0.02
NDEL1-208ENST00000580237 SPATA31A1Q5TZJ5 1347 aa15.16■□□□□ 0.02
NDEL1-208ENST00000580237 ZRANB1Q9UGI0 708 aa15.15■□□□□ 0.02
NDEL1-208ENST00000580237 CRB1P82279 1406 aa15.15■□□□□ 0.02
NDEL1-208ENST00000580237 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
NDEL1-208ENST00000580237 LARP1Q6PKG0 1096 aaKnown RBP15.14■□□□□ 0.01
NDEL1-208ENST00000580237 KRT27Q7Z3Y8 459 aa15.14■□□□□ 0.01
NDEL1-208ENST00000580237 PARP4Q9UKK3 1724 aaKnown RBP15.14■□□□□ 0.01
NDEL1-208ENST00000580237 CSB-PGBD3P0DP91 1061 aa15.13■□□□□ 0.01
NDEL1-208ENST00000580237 COG3Q96JB2 828 aa15.13■□□□□ 0.01
NDEL1-208ENST00000580237 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
NDEL1-208ENST00000580237 RGPD1P0DJD0 1748 aa15.12■□□□□ 0.01
NDEL1-208ENST00000580237 TOM1L2Q6ZVM7 507 aa15.12■□□□□ 0.01
NDEL1-208ENST00000580237 ARHGEF25Q86VW2 580 aa15.12■□□□□ 0.01
NDEL1-208ENST00000580237 NSD3Q9BZ95 1437 aa15.11■□□□□ 0.01
NDEL1-208ENST00000580237 LRRC37A3O60309 1634 aa15.11■□□□□ 0.01
NDEL1-208ENST00000580237 ONECUT3O60422 494 aaPredicted RBP15.11■□□□□ 0.01
NDEL1-208ENST00000580237 TCP11L2Q8N4U5 519 aa15.11■□□□□ 0.01
NDEL1-208ENST00000580237 ANKRD26Q9UPS8 1709 aa15.1■□□□□ 0.01
NDEL1-208ENST00000580237 WDR17Q8IZU2 1322 aa15.1■□□□□ 0.01
NDEL1-208ENST00000580237 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
NDEL1-208ENST00000580237 SF3B2Q13435 895 aaKnown RBP15.09■□□□□ 0.01
NDEL1-208ENST00000580237 BARGINQ6ZT62 677 aa15.09■□□□□ 0.01
NDEL1-208ENST00000580237 THRAP3Q9Y2W1 955 aaKnown RBP15.09■□□□□ 0.01
NDEL1-208ENST00000580237 CCDC125Q86Z20 511 aa15.07■□□□□ 0
NDEL1-208ENST00000580237 GGNBP2Q9H3C7 697 aa15.07■□□□□ 0
NDEL1-208ENST00000580237 AXIN2Q9Y2T1 843 aa15.07■□□□□ 0
NDEL1-208ENST00000580237 EP400Q96L91 3159 aa15.07■□□□□ 0
NDEL1-208ENST00000580237 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
NDEL1-208ENST00000580237 PDE3BQ13370 1112 aa15.06■□□□□ 0
NDEL1-208ENST00000580237 FAM182BQ5T319 152 aa15.05■□□□□ -0
NDEL1-208ENST00000580237 ERBB3P21860 1342 aa15.05■□□□□ -0
NDEL1-208ENST00000580237 CCDC7Q96M83 1385 aa15.05■□□□□ -0
NDEL1-208ENST00000580237 RGPD2P0DJD1 1756 aa15.05■□□□□ -0
NDEL1-208ENST00000580237 CGNL1Q0VF96 1302 aa15.04■□□□□ -0
NDEL1-208ENST00000580237 FYB1O15117 783 aa15.04■□□□□ -0
NDEL1-208ENST00000580237 AMPHP49418 695 aa15.04■□□□□ -0
NDEL1-208ENST00000580237 NLRP2Q9NX02 1062 aa15.04■□□□□ -0
NDEL1-208ENST00000580237 MAP2P11137 1827 aaKnown RBP15.03■□□□□ -0
NDEL1-208ENST00000580237 RTL1A6NKG5 1358 aa15.03■□□□□ -0
NDEL1-208ENST00000580237 MAP3K19Q56UN5 1328 aa15.03■□□□□ -0
NDEL1-208ENST00000580237 ANKRD24Q8TF21 1146 aa15.03■□□□□ -0
NDEL1-208ENST00000580237 CARD10Q9BWT7 1032 aa15.03■□□□□ -0
NDEL1-208ENST00000580237 SMG6Q86US8 1419 aaKnown RBP15.02■□□□□ -0
NDEL1-208ENST00000580237 DDB1Q16531 1140 aa15.02■□□□□ -0
NDEL1-208ENST00000580237 LTV1Q96GA3 475 aaPredicted RBP15.02■□□□□ -0
NDEL1-208ENST00000580237 CDCA7Q9BWT1 371 aaPredicted RBP15.02■□□□□ -0
NDEL1-208ENST00000580237 KAT6BQ8WYB5 2073 aa15.02□□□□□ -0.01
NDEL1-208ENST00000580237 OVOS2A0A0G2JMS6 1433 aa15.01□□□□□ -0.01
NDEL1-208ENST00000580237 SBF2Q86WG5 1849 aa15.01□□□□□ -0.01
NDEL1-208ENST00000580237 PEAK1Q9H792 1746 aa15.01□□□□□ -0.01
NDEL1-208ENST00000580237 FAM196AQ6ZSG2 479 aa15.01□□□□□ -0.01
NDEL1-208ENST00000580237 CARD14Q9BXL6 1004 aa15.01□□□□□ -0.01
NDEL1-208ENST00000580237 TNS2Q63HR2 1409 aa15□□□□□ -0.01
NDEL1-208ENST00000580237 HOXC9P31274 260 aa15□□□□□ -0.01
NDEL1-208ENST00000580237 BAG6P46379 1132 aa15□□□□□ -0.01
NDEL1-208ENST00000580237 RRS1Q15050 365 aaKnown RBP15□□□□□ -0.01
NDEL1-208ENST00000580237 IP6K1Q92551 441 aa15□□□□□ -0.01
NDEL1-208ENST00000580237 FBLN1P23142 703 aa14.99□□□□□ -0.01
NDEL1-208ENST00000580237 DISP2A7MBM2 1401 aa14.99□□□□□ -0.01
NDEL1-208ENST00000580237 FLT4P35916 1363 aa14.98□□□□□ -0.01
NDEL1-208ENST00000580237 DEFB132Q7Z7B7 95 aa14.98□□□□□ -0.01
NDEL1-208ENST00000580237 PANK3Q9H999 370 aa14.98□□□□□ -0.01
NDEL1-208ENST00000580237 KIF7Q2M1P5 1343 aa14.97□□□□□ -0.01
NDEL1-208ENST00000580237 TRIM37O94972 964 aa14.97□□□□□ -0.01
NDEL1-208ENST00000580237 NSD2O96028 1365 aa14.97□□□□□ -0.01
NDEL1-208ENST00000580237 C11orf95C9JLR9 678 aaPredicted RBP14.96□□□□□ -0.01
NDEL1-208ENST00000580237 IL2RBP14784 551 aa14.96□□□□□ -0.01
NDEL1-208ENST00000580237 KIF24Q5T7B8 1368 aa14.96□□□□□ -0.02
NDEL1-208ENST00000580237 PPM1GO15355 546 aaPredicted RBP14.95□□□□□ -0.02
NDEL1-208ENST00000580237 EXOC5O00471 708 aa14.94□□□□□ -0.02
NDEL1-208ENST00000580237 TNNT2P45379 298 aaPredicted RBP14.94□□□□□ -0.02
NDEL1-208ENST00000580237 KNSTRNQ9Y448 316 aa14.94□□□□□ -0.02
NDEL1-208ENST00000580237 INSRP06213 1382 aa14.94□□□□□ -0.02
NDEL1-208ENST00000580237 RGPD3A6NKT7 1758 aaPredicted RBP14.93□□□□□ -0.02
NDEL1-208ENST00000580237 RGPD4Q7Z3J3 1758 aa14.93□□□□□ -0.02
NDEL1-208ENST00000580237 EMILIN1Q9Y6C2 1016 aa14.93□□□□□ -0.02
NDEL1-208ENST00000580237 NHSQ6T4R5 1651 aa14.93□□□□□ -0.02
NDEL1-208ENST00000580237 RREB1Q92766 1687 aa14.93□□□□□ -0.02
NDEL1-208ENST00000580237 SHANK3Q9BYB0 1731 aa14.92□□□□□ -0.02
NDEL1-208ENST00000580237 APBA3O96018 575 aa14.92□□□□□ -0.02
NDEL1-208ENST00000580237 EN1Q05925 392 aaPredicted RBP14.92□□□□□ -0.02
NDEL1-208ENST00000580237 NUP188Q5SRE5 1749 aa14.92□□□□□ -0.02
NDEL1-208ENST00000580237 HSP90AB2PQ58FF8 381 aa14.91□□□□□ -0.02
NDEL1-208ENST00000580237 DOT1LQ8TEK3 1739 aa14.91□□□□□ -0.02
NDEL1-208ENST00000580237 PARD3Q8TEW0 1356 aa14.9□□□□□ -0.02
NDEL1-208ENST00000580237 MORC1Q86VD1 984 aa14.9□□□□□ -0.02
NDEL1-208ENST00000580237 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
NDEL1-208ENST00000580237 MARCH10Q8NA82 808 aaPredicted RBP14.9□□□□□ -0.02
NDEL1-208ENST00000580237 MEGF6O75095 1541 aa14.9□□□□□ -0.02
NDEL1-208ENST00000580237 BTAF1O14981 1849 aa14.89□□□□□ -0.03
NDEL1-208ENST00000580237 RAPGEF4Q8WZA2 1011 aa14.89□□□□□ -0.03
NDEL1-208ENST00000580237 BCL9O00512 1426 aa14.88□□□□□ -0.03
NDEL1-208ENST00000580237 PKD1L3Q7Z443 1732 aa14.87□□□□□ -0.03
NDEL1-208ENST00000580237 EZH2Q15910 746 aaKnown RBP14.87□□□□□ -0.03
NDEL1-208ENST00000580237 NBPF6Q5VWK0 638 aa14.87□□□□□ -0.03
NDEL1-208ENST00000580237 NBPF4Q96M43 638 aa14.87□□□□□ -0.03
NDEL1-208ENST00000580237 WASHC2AQ641Q2 1341 aa14.87□□□□□ -0.03
NDEL1-208ENST00000580237 DDX54Q8TDD1 881 aaKnown RBP14.86□□□□□ -0.03
NDEL1-208ENST00000580237 POLKQ9UBT6 870 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms