RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 C11orf95C9JLR9 678 aaPredicted RBP20.04■□□□□ 0.8
MKS1-207ENST00000578789 FYB1O15117 783 aa20.04■□□□□ 0.8
MKS1-207ENST00000578789 EVA1CP58658 441 aa20.04■□□□□ 0.8
MKS1-207ENST00000578789 SEPT12Q8IYM1 358 aa20.04■□□□□ 0.8
MKS1-207ENST00000578789 WNK3Q9BYP7 1800 aa20.04■□□□□ 0.8
MKS1-207ENST00000578789 CRB1P82279 1406 aa20.03■□□□□ 0.8
MKS1-207ENST00000578789 LARP1Q6PKG0 1096 aaKnown RBP20.03■□□□□ 0.8
MKS1-207ENST00000578789 AXIN2Q9Y2T1 843 aa20.03■□□□□ 0.8
MKS1-207ENST00000578789 ANKRD26Q9UPS8 1709 aa20.02■□□□□ 0.8
MKS1-207ENST00000578789 FAM98CQ17RN3 349 aaKnown RBP20.02■□□□□ 0.8
MKS1-207ENST00000578789 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
MKS1-207ENST00000578789 BARGINQ6ZT62 677 aa20.01■□□□□ 0.79
MKS1-207ENST00000578789 KIF7Q2M1P5 1343 aa20.01■□□□□ 0.79
MKS1-207ENST00000578789 WDR17Q8IZU2 1322 aa20.01■□□□□ 0.79
MKS1-207ENST00000578789 PARP4Q9UKK3 1724 aaKnown RBP20■□□□□ 0.79
MKS1-207ENST00000578789 UPF1Q92900 1129 aaKnown RBP eCLIP20■□□□□ 0.79
MKS1-207ENST00000578789 GGNBP2Q9H3C7 697 aa20■□□□□ 0.79
MKS1-207ENST00000578789 BLMP54132 1417 aaPredicted RBP20■□□□□ 0.79
MKS1-207ENST00000578789 THRAP3Q9Y2W1 955 aaKnown RBP19.99■□□□□ 0.79
MKS1-207ENST00000578789 FAM208AQ9UK61 1670 aaKnown RBP19.99■□□□□ 0.79
MKS1-207ENST00000578789 TCP11L2Q8N4U5 519 aa19.98■□□□□ 0.79
MKS1-207ENST00000578789 RTL1A6NKG5 1358 aa19.97■□□□□ 0.79
MKS1-207ENST00000578789 CGNL1Q0VF96 1302 aa19.97■□□□□ 0.79
MKS1-207ENST00000578789 KRT27Q7Z3Y8 459 aa19.96■□□□□ 0.79
MKS1-207ENST00000578789 USP35Q9P2H5 1018 aa19.96■□□□□ 0.79
MKS1-207ENST00000578789 ERBB3P21860 1342 aa19.96■□□□□ 0.79
MKS1-207ENST00000578789 MAP3K19Q56UN5 1328 aa19.96■□□□□ 0.79
MKS1-207ENST00000578789 LRRC37A3O60309 1634 aa19.95■□□□□ 0.78
MKS1-207ENST00000578789 A0A0G2JS52 829 aa19.95■□□□□ 0.78
MKS1-207ENST00000578789 MYT1Q01538 1121 aa19.95■□□□□ 0.78
MKS1-207ENST00000578789 TOM1L2Q6ZVM7 507 aa19.95■□□□□ 0.78
MKS1-207ENST00000578789 IP6K1Q92551 441 aa19.95■□□□□ 0.78
MKS1-207ENST00000578789 PANK3Q9H999 370 aa19.95■□□□□ 0.78
MKS1-207ENST00000578789 PEAK1Q9H792 1746 aa19.94■□□□□ 0.78
MKS1-207ENST00000578789 CCDC7Q96M83 1385 aa19.94■□□□□ 0.78
MKS1-207ENST00000578789 CARD10Q9BWT7 1032 aa19.93■□□□□ 0.78
MKS1-207ENST00000578789 NSD2O96028 1365 aa19.93■□□□□ 0.78
MKS1-207ENST00000578789 DISP2A7MBM2 1401 aa19.93■□□□□ 0.78
MKS1-207ENST00000578789 CSB-PGBD3P0DP91 1061 aa19.92■□□□□ 0.78
MKS1-207ENST00000578789 HOXC9P31274 260 aa19.92■□□□□ 0.78
MKS1-207ENST00000578789 KIF24Q5T7B8 1368 aa19.92■□□□□ 0.78
MKS1-207ENST00000578789 FBLN1P23142 703 aa19.91■□□□□ 0.78
MKS1-207ENST00000578789 ANKRD24Q8TF21 1146 aa19.91■□□□□ 0.78
MKS1-207ENST00000578789 RRS1Q15050 365 aaKnown RBP19.9■□□□□ 0.78
MKS1-207ENST00000578789 WASHC2AQ641Q2 1341 aa19.9■□□□□ 0.78
MKS1-207ENST00000578789 EP400Q96L91 3159 aa19.89■□□□□ 0.77
MKS1-207ENST00000578789 MAP2P11137 1827 aaKnown RBP19.88■□□□□ 0.77
MKS1-207ENST00000578789 FLT4P35916 1363 aa19.88■□□□□ 0.77
MKS1-207ENST00000578789 AMPHP49418 695 aa19.88■□□□□ 0.77
MKS1-207ENST00000578789 CCDC125Q86Z20 511 aa19.88■□□□□ 0.77
MKS1-207ENST00000578789 CDCA7Q9BWT1 371 aaPredicted RBP19.88■□□□□ 0.77
MKS1-207ENST00000578789 RGPD1P0DJD0 1748 aa19.88■□□□□ 0.77
MKS1-207ENST00000578789 RGPD2P0DJD1 1756 aa19.87■□□□□ 0.77
MKS1-207ENST00000578789 INSRP06213 1382 aa19.86■□□□□ 0.77
MKS1-207ENST00000578789 TNS1Q9HBL0 1735 aaKnown RBP19.85■□□□□ 0.77
MKS1-207ENST00000578789 MSH5O43196 834 aa19.85■□□□□ 0.77
MKS1-207ENST00000578789 NLRP2Q9NX02 1062 aa19.85■□□□□ 0.77
MKS1-207ENST00000578789 TNS2Q63HR2 1409 aa19.85■□□□□ 0.77
MKS1-207ENST00000578789 KNSTRNQ9Y448 316 aa19.84■□□□□ 0.77
MKS1-207ENST00000578789 SMG6Q86US8 1419 aaKnown RBP19.84■□□□□ 0.77
MKS1-207ENST00000578789 PDE3BQ13370 1112 aa19.83■□□□□ 0.77
MKS1-207ENST00000578789 AMER1Q5JTC6 1135 aaPredicted RBP19.83■□□□□ 0.77
MKS1-207ENST00000578789 PIAS4Q8N2W9 510 aaPredicted RBP19.83■□□□□ 0.77
MKS1-207ENST00000578789 EMILIN1Q9Y6C2 1016 aa19.83■□□□□ 0.77
MKS1-207ENST00000578789 PER1O15534 1290 aaPredicted RBP19.82■□□□□ 0.76
MKS1-207ENST00000578789 DDB1Q16531 1140 aa19.82■□□□□ 0.76
MKS1-207ENST00000578789 FAM182BQ5T319 152 aa19.82■□□□□ 0.76
MKS1-207ENST00000578789 LTV1Q96GA3 475 aaPredicted RBP19.82■□□□□ 0.76
MKS1-207ENST00000578789 OVOS2A0A0G2JMS6 1433 aa19.82■□□□□ 0.76
MKS1-207ENST00000578789 FAM196AQ6ZSG2 479 aa19.81■□□□□ 0.76
MKS1-207ENST00000578789 BCL9O00512 1426 aa19.8■□□□□ 0.76
MKS1-207ENST00000578789 HSP90AB2PQ58FF8 381 aa19.8■□□□□ 0.76
MKS1-207ENST00000578789 POLKQ9UBT6 870 aa19.8■□□□□ 0.76
MKS1-207ENST00000578789 SBF2Q86WG5 1849 aa19.8■□□□□ 0.76
MKS1-207ENST00000578789 IL2RBP14784 551 aa19.79■□□□□ 0.76
MKS1-207ENST00000578789 NPC1L1Q9UHC9 1359 aa19.79■□□□□ 0.76
MKS1-207ENST00000578789 NCAPD2Q15021 1401 aa19.78■□□□□ 0.76
MKS1-207ENST00000578789 SHANK3Q9BYB0 1731 aa19.77■□□□□ 0.76
MKS1-207ENST00000578789 MORC1Q86VD1 984 aa19.77■□□□□ 0.76
MKS1-207ENST00000578789 MEGF6O75095 1541 aa19.76■□□□□ 0.75
MKS1-207ENST00000578789 TNNT2P45379 298 aaPredicted RBP19.76■□□□□ 0.75
MKS1-207ENST00000578789 SF3B2Q13435 895 aaKnown RBP19.76■□□□□ 0.75
MKS1-207ENST00000578789 NBPF6Q5VWK0 638 aa19.76■□□□□ 0.75
MKS1-207ENST00000578789 NBPF4Q96M43 638 aa19.76■□□□□ 0.75
MKS1-207ENST00000578789 EXOC5O00471 708 aa19.75■□□□□ 0.75
MKS1-207ENST00000578789 MARCH10Q8NA82 808 aaPredicted RBP19.75■□□□□ 0.75
MKS1-207ENST00000578789 PPM1GO15355 546 aaPredicted RBP19.74■□□□□ 0.75
MKS1-207ENST00000578789 TRIM37O94972 964 aa19.72■□□□□ 0.75
MKS1-207ENST00000578789 ADRA2BP18089 450 aa19.72■□□□□ 0.75
MKS1-207ENST00000578789 BAG6P46379 1132 aa19.72■□□□□ 0.75
MKS1-207ENST00000578789 DEFB132Q7Z7B7 95 aa19.72■□□□□ 0.75
MKS1-207ENST00000578789 RGPD3A6NKT7 1758 aaPredicted RBP19.72■□□□□ 0.75
MKS1-207ENST00000578789 RGPD4Q7Z3J3 1758 aa19.72■□□□□ 0.75
MKS1-207ENST00000578789 NHSQ6T4R5 1651 aa19.71■□□□□ 0.75
MKS1-207ENST00000578789 PKD1L3Q7Z443 1732 aa19.71■□□□□ 0.75
MKS1-207ENST00000578789 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
MKS1-207ENST00000578789 USHBP1Q8N6Y0 703 aa19.71■□□□□ 0.75
MKS1-207ENST00000578789 RREB1Q92766 1687 aa19.69■□□□□ 0.74
MKS1-207ENST00000578789 EIF4A2Q14240 407 aaKnown RBP19.69■□□□□ 0.74
MKS1-207ENST00000578789 CC2D1BQ5T0F9 858 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms