RNA–Protein interactions for RNA: ENST00000578476.5

EIF4A1-208, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-208ENST00000578476 CAMTA1Q9Y6Y1 1673 aa22.58■■□□□ 1.21
EIF4A1-208ENST00000578476 STRN4Q9NRL3 753 aa22.58■■□□□ 1.21
EIF4A1-208ENST00000578476 PPM1GO15355 546 aaPredicted RBP22.57■■□□□ 1.2
EIF4A1-208ENST00000578476 HOXC9P31274 260 aa22.57■■□□□ 1.2
EIF4A1-208ENST00000578476 QTRT2Q9H974 415 aaKnown RBP22.57■■□□□ 1.2
EIF4A1-208ENST00000578476 LMO7Q8WWI1 1683 aa22.57■■□□□ 1.2
EIF4A1-208ENST00000578476 COL18A1P39060 1754 aa22.56■■□□□ 1.2
EIF4A1-208ENST00000578476 RTL1A6NKG5 1358 aa22.56■■□□□ 1.2
EIF4A1-208ENST00000578476 TRPC5Q9UL62 973 aaPredicted RBP22.56■■□□□ 1.2
EIF4A1-208ENST00000578476 NWD2Q9ULI1 1742 aa22.56■■□□□ 1.2
EIF4A1-208ENST00000578476 ABCC6O95255 1503 aa22.56■■□□□ 1.2
EIF4A1-208ENST00000578476 LTN1O94822 1766 aa22.55■■□□□ 1.2
EIF4A1-208ENST00000578476 KIF24Q5T7B8 1368 aa22.55■■□□□ 1.2
EIF4A1-208ENST00000578476 VPS72Q15906 364 aa22.54■■□□□ 1.2
EIF4A1-208ENST00000578476 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
EIF4A1-208ENST00000578476 FLT4P35916 1363 aa22.53■■□□□ 1.2
EIF4A1-208ENST00000578476 POTEAQ6S8J7 498 aa22.53■■□□□ 1.2
EIF4A1-208ENST00000578476 CCDC9Q9Y3X0 531 aaKnown RBP22.53■■□□□ 1.2
EIF4A1-208ENST00000578476 ATRNO75882 1429 aa22.53■■□□□ 1.2
EIF4A1-208ENST00000578476 BLMP54132 1417 aaPredicted RBP22.53■■□□□ 1.2
EIF4A1-208ENST00000578476 CSB-PGBD3P0DP91 1061 aa22.52■■□□□ 1.2
EIF4A1-208ENST00000578476 HSP90AB2PQ58FF8 381 aa22.52■■□□□ 1.2
EIF4A1-208ENST00000578476 LARP1Q6PKG0 1096 aaKnown RBP22.52■■□□□ 1.2
EIF4A1-208ENST00000578476 ANKRD24Q8TF21 1146 aa22.52■■□□□ 1.2
EIF4A1-208ENST00000578476 NRAPQ86VF7 1730 aa22.51■■□□□ 1.19
EIF4A1-208ENST00000578476 LTV1Q96GA3 475 aaPredicted RBP22.51■■□□□ 1.19
EIF4A1-208ENST00000578476 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.51■■□□□ 1.19
EIF4A1-208ENST00000578476 PARD3Q8TEW0 1356 aa22.5■■□□□ 1.19
EIF4A1-208ENST00000578476 MTHFSP49914 203 aa22.5■■□□□ 1.19
EIF4A1-208ENST00000578476 RALBP1Q15311 655 aa22.5■■□□□ 1.19
EIF4A1-208ENST00000578476 GJD4Q96KN9 370 aaPredicted RBP22.5■■□□□ 1.19
EIF4A1-208ENST00000578476 PEAK1Q9H792 1746 aa22.5■■□□□ 1.19
EIF4A1-208ENST00000578476 ERBB3P21860 1342 aa22.5■■□□□ 1.19
EIF4A1-208ENST00000578476 WDR17Q8IZU2 1322 aa22.5■■□□□ 1.19
EIF4A1-208ENST00000578476 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
EIF4A1-208ENST00000578476 INSRP06213 1382 aa22.5■■□□□ 1.19
EIF4A1-208ENST00000578476 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
EIF4A1-208ENST00000578476 PPP2R1AP30153 589 aa22.49■■□□□ 1.19
EIF4A1-208ENST00000578476 TOM1L2Q6ZVM7 507 aa22.49■■□□□ 1.19
EIF4A1-208ENST00000578476 SPATA31A5Q5VU36 1347 aa22.48■■□□□ 1.19
EIF4A1-208ENST00000578476 SPATA31A7Q8IWB4 1347 aa22.48■■□□□ 1.19
EIF4A1-208ENST00000578476 RXRBP28702 533 aa22.47■■□□□ 1.19
EIF4A1-208ENST00000578476 RBM6P78332 1123 aaKnown RBP22.47■■□□□ 1.19
EIF4A1-208ENST00000578476 RGPD5Q99666 1765 aa22.47■■□□□ 1.19
EIF4A1-208ENST00000578476 USP35Q9P2H5 1018 aa22.46■■□□□ 1.19
EIF4A1-208ENST00000578476 SPATA31A1Q5TZJ5 1347 aa22.46■■□□□ 1.19
EIF4A1-208ENST00000578476 CRB1P82279 1406 aa22.46■■□□□ 1.19
EIF4A1-208ENST00000578476 PRKRIP1Q9H875 184 aaPredicted RBP22.45■■□□□ 1.18
EIF4A1-208ENST00000578476 NLRP2Q9NX02 1062 aa22.45■■□□□ 1.18
EIF4A1-208ENST00000578476 CDK12Q9NYV4 1490 aaPredicted RBP22.45■■□□□ 1.18
EIF4A1-208ENST00000578476 CARD10Q9BWT7 1032 aa22.44■■□□□ 1.18
EIF4A1-208ENST00000578476 EIF4A2Q14240 407 aaKnown RBP22.42■■□□□ 1.18
EIF4A1-208ENST00000578476 TCP11L2Q8N4U5 519 aa22.42■■□□□ 1.18
EIF4A1-208ENST00000578476 THRAP3Q9Y2W1 955 aaKnown RBP22.41■■□□□ 1.18
EIF4A1-208ENST00000578476 MYBBP1AQ9BQG0 1328 aaKnown RBP22.4■■□□□ 1.18
EIF4A1-208ENST00000578476 ANP32CO43423 234 aa22.4■■□□□ 1.18
EIF4A1-208ENST00000578476 FAM98CQ17RN3 349 aaKnown RBP22.4■■□□□ 1.18
EIF4A1-208ENST00000578476 NBPF6Q5VWK0 638 aa22.4■■□□□ 1.18
EIF4A1-208ENST00000578476 NBPF4Q96M43 638 aa22.4■■□□□ 1.18
EIF4A1-208ENST00000578476 CFAP53Q96M91 514 aa22.4■■□□□ 1.18
EIF4A1-208ENST00000578476 GLI3P10071 1580 aa22.4■■□□□ 1.18
EIF4A1-208ENST00000578476 IL13P35225 146 aa22.38■■□□□ 1.17
EIF4A1-208ENST00000578476 BARGINQ6ZT62 677 aa22.38■■□□□ 1.17
EIF4A1-208ENST00000578476 ONECUT3O60422 494 aaPredicted RBP22.37■■□□□ 1.17
EIF4A1-208ENST00000578476 DIAPH1O60610 1272 aaKnown RBP22.37■■□□□ 1.17
EIF4A1-208ENST00000578476 EYA1Q99502 592 aa22.37■■□□□ 1.17
EIF4A1-208ENST00000578476 USHBP1Q8N6Y0 703 aa22.36■■□□□ 1.17
EIF4A1-208ENST00000578476 A0A0G2JS52 829 aa22.35■■□□□ 1.17
EIF4A1-208ENST00000578476 MYT1Q01538 1121 aa22.35■■□□□ 1.17
EIF4A1-208ENST00000578476 FAM208AQ9UK61 1670 aaKnown RBP22.35■■□□□ 1.17
EIF4A1-208ENST00000578476 SEPT12Q8IYM1 358 aa22.34■■□□□ 1.17
EIF4A1-208ENST00000578476 COL3A1P02461 1466 aaPredicted RBP22.34■■□□□ 1.17
EIF4A1-208ENST00000578476 CDCA7Q9BWT1 371 aaPredicted RBP22.33■■□□□ 1.17
EIF4A1-208ENST00000578476 IL2RBP14784 551 aa22.32■■□□□ 1.16
EIF4A1-208ENST00000578476 IGSF1Q8N6C5 1336 aa22.31■■□□□ 1.16
EIF4A1-208ENST00000578476 RGS12O14924 1447 aa22.31■■□□□ 1.16
EIF4A1-208ENST00000578476 RGPD2P0DJD1 1756 aa22.3■■□□□ 1.16
EIF4A1-208ENST00000578476 DIEXFQ68CQ4 756 aaKnown RBP22.3■■□□□ 1.16
EIF4A1-208ENST00000578476 NUDCQ9Y266 331 aa22.3■■□□□ 1.16
EIF4A1-208ENST00000578476 U2SURPO15042 1029 aaKnown RBP22.29■■□□□ 1.16
EIF4A1-208ENST00000578476 RAPGEF4Q8WZA2 1011 aa22.29■■□□□ 1.16
EIF4A1-208ENST00000578476 DISP2A7MBM2 1401 aa22.29■■□□□ 1.16
EIF4A1-208ENST00000578476 NCAPD2Q15021 1401 aa22.29■■□□□ 1.16
EIF4A1-208ENST00000578476 SULT6B1Q6IMI4 303 aa22.28■■□□□ 1.16
EIF4A1-208ENST00000578476 THSD7AQ9UPZ6 1657 aa22.26■■□□□ 1.15
EIF4A1-208ENST00000578476 TATP17735 454 aaPredicted RBP22.26■■□□□ 1.15
EIF4A1-208ENST00000578476 DDB1Q16531 1140 aa22.26■■□□□ 1.15
EIF4A1-208ENST00000578476 ILDR2Q71H61 639 aa22.26■■□□□ 1.15
EIF4A1-208ENST00000578476 AEBP1Q8IUX7 1158 aa22.26■■□□□ 1.15
EIF4A1-208ENST00000578476 EXOC5O00471 708 aa22.25■■□□□ 1.15
EIF4A1-208ENST00000578476 HMOX1P09601 288 aa22.24■■□□□ 1.15
EIF4A1-208ENST00000578476 PDE3BQ13370 1112 aa22.24■■□□□ 1.15
EIF4A1-208ENST00000578476 MEGF6O75095 1541 aa22.24■■□□□ 1.15
EIF4A1-208ENST00000578476 RGPD1P0DJD0 1748 aa22.23■■□□□ 1.15
EIF4A1-208ENST00000578476 U2AF1L5P0DN76 240 aaPredicted RBP22.23■■□□□ 1.15
EIF4A1-208ENST00000578476 U2AF1Q01081 240 aaKnown RBP eCLIP22.23■■□□□ 1.151e-10■■■■□ 21.4
EIF4A1-208ENST00000578476 KRT27Q7Z3Y8 459 aa22.23■■□□□ 1.15
EIF4A1-208ENST00000578476 KDRP35968 1356 aa22.23■■□□□ 1.15
EIF4A1-208ENST00000578476 WNK3Q9BYP7 1800 aa22.22■■□□□ 1.15
EIF4A1-208ENST00000578476 OVOS2A0A0G2JMS6 1433 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms