RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
NPLOC4-214ENST00000573876 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
NPLOC4-214ENST00000573876 ANP32CO43423 234 aa17.47■□□□□ 0.39
NPLOC4-214ENST00000573876 RGS17Q9UGC6 210 aaPredicted RBP17.47■□□□□ 0.39
NPLOC4-214ENST00000573876 BCL9LQ86UU0 1499 aa17.47■□□□□ 0.39
NPLOC4-214ENST00000573876 ABCC6O95255 1503 aa17.47■□□□□ 0.39
NPLOC4-214ENST00000573876 RTL1A6NKG5 1358 aa17.46■□□□□ 0.39
NPLOC4-214ENST00000573876 KIF24Q5T7B8 1368 aa17.46■□□□□ 0.39
NPLOC4-214ENST00000573876 CSB-PGBD3P0DP91 1061 aa17.46■□□□□ 0.39
NPLOC4-214ENST00000573876 VPS72Q15906 364 aa17.46■□□□□ 0.39
NPLOC4-214ENST00000573876 LTN1O94822 1766 aa17.45■□□□□ 0.38
NPLOC4-214ENST00000573876 CAMTA1Q9Y6Y1 1673 aa17.45■□□□□ 0.38
NPLOC4-214ENST00000573876 HOXC9P31274 260 aa17.45■□□□□ 0.38
NPLOC4-214ENST00000573876 RALBP1Q15311 655 aa17.45■□□□□ 0.38
NPLOC4-214ENST00000573876 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
NPLOC4-214ENST00000573876 AXIN2Q9Y2T1 843 aa17.45■□□□□ 0.38
NPLOC4-214ENST00000573876 EMILIN1Q9Y6C2 1016 aa17.45■□□□□ 0.38
NPLOC4-214ENST00000573876 FLT4P35916 1363 aa17.44■□□□□ 0.38
NPLOC4-214ENST00000573876 POTEAQ6S8J7 498 aa17.44■□□□□ 0.38
NPLOC4-214ENST00000573876 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
NPLOC4-214ENST00000573876 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
NPLOC4-214ENST00000573876 ATRNO75882 1429 aa17.44■□□□□ 0.38
NPLOC4-214ENST00000573876 BLMP54132 1417 aaPredicted RBP17.44■□□□□ 0.38
NPLOC4-214ENST00000573876 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.44■□□□□ 0.38
NPLOC4-214ENST00000573876 COL18A1P39060 1754 aa17.43■□□□□ 0.38
NPLOC4-214ENST00000573876 MAP2P11137 1827 aaKnown RBP17.43■□□□□ 0.38
NPLOC4-214ENST00000573876 RXRBP28702 533 aa17.43■□□□□ 0.38
NPLOC4-214ENST00000573876 RBM6P78332 1123 aaKnown RBP17.43■□□□□ 0.38
NPLOC4-214ENST00000573876 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
NPLOC4-214ENST00000573876 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
NPLOC4-214ENST00000573876 COL5A2P05997 1499 aaPredicted RBP17.43■□□□□ 0.38
NPLOC4-214ENST00000573876 LARP1Q6PKG0 1096 aaKnown RBP17.42■□□□□ 0.38
NPLOC4-214ENST00000573876 TOM1L2Q6ZVM7 507 aa17.42■□□□□ 0.38
NPLOC4-214ENST00000573876 GJD4Q96KN9 370 aaPredicted RBP17.42■□□□□ 0.38
NPLOC4-214ENST00000573876 WDR17Q8IZU2 1322 aa17.42■□□□□ 0.38
NPLOC4-214ENST00000573876 SMG6Q86US8 1419 aaKnown RBP17.41■□□□□ 0.38
NPLOC4-214ENST00000573876 ERBB3P21860 1342 aa17.41■□□□□ 0.38
NPLOC4-214ENST00000573876 NRAPQ86VF7 1730 aa17.41■□□□□ 0.38
NPLOC4-214ENST00000573876 INSRP06213 1382 aa17.4■□□□□ 0.38
NPLOC4-214ENST00000573876 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
NPLOC4-214ENST00000573876 HSP90AB2PQ58FF8 381 aa17.4■□□□□ 0.38
NPLOC4-214ENST00000573876 NLRP2Q9NX02 1062 aa17.4■□□□□ 0.38
NPLOC4-214ENST00000573876 SPATA31A5Q5VU36 1347 aa17.4■□□□□ 0.38
NPLOC4-214ENST00000573876 SPATA31A7Q8IWB4 1347 aa17.4■□□□□ 0.38
NPLOC4-214ENST00000573876 RGPD5Q99666 1765 aa17.39■□□□□ 0.37
NPLOC4-214ENST00000573876 PARD3Q8TEW0 1356 aa17.39■□□□□ 0.37
NPLOC4-214ENST00000573876 CRB1P82279 1406 aa17.38■□□□□ 0.37
NPLOC4-214ENST00000573876 MTHFSP49914 203 aa17.38■□□□□ 0.37
NPLOC4-214ENST00000573876 CARD10Q9BWT7 1032 aa17.38■□□□□ 0.37
NPLOC4-214ENST00000573876 USP35Q9P2H5 1018 aa17.38■□□□□ 0.37
NPLOC4-214ENST00000573876 SPATA31A1Q5TZJ5 1347 aa17.38■□□□□ 0.37
NPLOC4-214ENST00000573876 TCP11L2Q8N4U5 519 aa17.37■□□□□ 0.37
NPLOC4-214ENST00000573876 THRAP3Q9Y2W1 955 aaKnown RBP17.37■□□□□ 0.37
NPLOC4-214ENST00000573876 A0A0G2JS52 829 aa17.36■□□□□ 0.37
NPLOC4-214ENST00000573876 MYT1Q01538 1121 aa17.36■□□□□ 0.37
NPLOC4-214ENST00000573876 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
NPLOC4-214ENST00000573876 CDK12Q9NYV4 1490 aaPredicted RBP17.36■□□□□ 0.37
NPLOC4-214ENST00000573876 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
NPLOC4-214ENST00000573876 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
NPLOC4-214ENST00000573876 MIER1Q8N108 512 aa17.35■□□□□ 0.37
NPLOC4-214ENST00000573876 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
NPLOC4-214ENST00000573876 ILDR2Q71H61 639 aa17.34■□□□□ 0.37
NPLOC4-214ENST00000573876 EIF4A2Q14240 407 aaKnown RBP17.33■□□□□ 0.36
NPLOC4-214ENST00000573876 BARGINQ6ZT62 677 aa17.33■□□□□ 0.36
NPLOC4-214ENST00000573876 GLI3P10071 1580 aa17.32■□□□□ 0.36
NPLOC4-214ENST00000573876 CDCA7Q9BWT1 371 aaPredicted RBP17.32■□□□□ 0.36
NPLOC4-214ENST00000573876 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
NPLOC4-214ENST00000573876 ONECUT3O60422 494 aaPredicted RBP17.31■□□□□ 0.36
NPLOC4-214ENST00000573876 DIAPH1O60610 1272 aaKnown RBP17.31■□□□□ 0.36
NPLOC4-214ENST00000573876 NBPF6Q5VWK0 638 aa17.31■□□□□ 0.36
NPLOC4-214ENST00000573876 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
NPLOC4-214ENST00000573876 NBPF4Q96M43 638 aa17.31■□□□□ 0.36
NPLOC4-214ENST00000573876 CCDC184Q52MB2 194 aa17.29■□□□□ 0.36
NPLOC4-214ENST00000573876 EYA1Q99502 592 aa17.29■□□□□ 0.36
NPLOC4-214ENST00000573876 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
NPLOC4-214ENST00000573876 IL2RBP14784 551 aa17.28■□□□□ 0.36
NPLOC4-214ENST00000573876 IL13P35225 146 aa17.28■□□□□ 0.36
NPLOC4-214ENST00000573876 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
NPLOC4-214ENST00000573876 RAPGEF4Q8WZA2 1011 aa17.28■□□□□ 0.36
NPLOC4-214ENST00000573876 RGS12O14924 1447 aa17.27■□□□□ 0.35
NPLOC4-214ENST00000573876 TATP17735 454 aaPredicted RBP17.26■□□□□ 0.35
NPLOC4-214ENST00000573876 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
NPLOC4-214ENST00000573876 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
NPLOC4-214ENST00000573876 EXOC5O00471 708 aa17.25■□□□□ 0.35
NPLOC4-214ENST00000573876 U2SURPO15042 1029 aaKnown RBP17.25■□□□□ 0.35
NPLOC4-214ENST00000573876 DDB1Q16531 1140 aa17.25■□□□□ 0.35
NPLOC4-214ENST00000573876 MRS2Q9HD23 443 aa17.25■□□□□ 0.35
NPLOC4-214ENST00000573876 RGPD2P0DJD1 1756 aa17.25■□□□□ 0.35
NPLOC4-214ENST00000573876 SOCS7O14512 581 aa17.24■□□□□ 0.35
NPLOC4-214ENST00000573876 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
NPLOC4-214ENST00000573876 DISP2A7MBM2 1401 aa17.23■□□□□ 0.35
NPLOC4-214ENST00000573876 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
NPLOC4-214ENST00000573876 SULT6B1Q6IMI4 303 aa17.23■□□□□ 0.35
NPLOC4-214ENST00000573876 COL3A1P02461 1466 aaPredicted RBP17.23■□□□□ 0.35
NPLOC4-214ENST00000573876 THSD7AQ9UPZ6 1657 aa17.22■□□□□ 0.35
NPLOC4-214ENST00000573876 NCAPD2Q15021 1401 aa17.21■□□□□ 0.34
NPLOC4-214ENST00000573876 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
NPLOC4-214ENST00000573876 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■■□□ 17.1
NPLOC4-214ENST00000573876 ZCRB1Q8TBF4 217 aaKnown RBP17.2■□□□□ 0.34
NPLOC4-214ENST00000573876 WNK3Q9BYP7 1800 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms