RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 RGPD2P0DJD1 1756 aa15.36■□□□□ 0.05
ABR-208ENST00000570688 ZBTB7CA1YPR0 619 aa15.35■□□□□ 0.05
ABR-208ENST00000570688 EMILIN1Q9Y6C2 1016 aa15.35■□□□□ 0.05
ABR-208ENST00000570688 ABCC6O95255 1503 aa15.34■□□□□ 0.05
ABR-208ENST00000570688 ZNF772Q68DY9 489 aaPredicted RBP15.34■□□□□ 0.05
ABR-208ENST00000570688 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
ABR-208ENST00000570688 DDX10Q13206 875 aaKnown RBP15.33■□□□□ 0.04
ABR-208ENST00000570688 VPS72Q15906 364 aa15.33■□□□□ 0.04
ABR-208ENST00000570688 KNSTRNQ9Y448 316 aa15.33■□□□□ 0.04
ABR-208ENST00000570688 NSD2O96028 1365 aa15.33■□□□□ 0.04
ABR-208ENST00000570688 NPC1L1Q9UHC9 1359 aa15.33■□□□□ 0.04
ABR-208ENST00000570688 RGS12O14924 1447 aa15.33■□□□□ 0.04
ABR-208ENST00000570688 POLKQ9UBT6 870 aa15.32■□□□□ 0.04
ABR-208ENST00000570688 HOXC9P31274 260 aa15.31■□□□□ 0.04
ABR-208ENST00000570688 TNNT2P45379 298 aaPredicted RBP15.31■□□□□ 0.04
ABR-208ENST00000570688 CC2D1BQ5T0F9 858 aaKnown RBP15.31■□□□□ 0.04
ABR-208ENST00000570688 IP6K1Q92551 441 aa15.31■□□□□ 0.04
ABR-208ENST00000570688 GJD4Q96KN9 370 aaPredicted RBP15.31■□□□□ 0.04
ABR-208ENST00000570688 STRN4Q9NRL3 753 aa15.31■□□□□ 0.04
ABR-208ENST00000570688 TRPC5Q9UL62 973 aaPredicted RBP15.31■□□□□ 0.04
ABR-208ENST00000570688 SPATA31A5Q5VU36 1347 aa15.31■□□□□ 0.04
ABR-208ENST00000570688 SPATA31A7Q8IWB4 1347 aa15.31■□□□□ 0.04
ABR-208ENST00000570688 SMG6Q86US8 1419 aaKnown RBP15.31■□□□□ 0.04
ABR-208ENST00000570688 BRWD3Q6RI45 1802 aa15.31■□□□□ 0.04
ABR-208ENST00000570688 FAM208AQ9UK61 1670 aaKnown RBP15.3■□□□□ 0.04
ABR-208ENST00000570688 THSD7AQ9UPZ6 1657 aa15.3■□□□□ 0.04
ABR-208ENST00000570688 WNK3Q9BYP7 1800 aa15.29■□□□□ 0.04
ABR-208ENST00000570688 ERBB3P21860 1342 aa15.29■□□□□ 0.04
ABR-208ENST00000570688 SPATA31A1Q5TZJ5 1347 aa15.29■□□□□ 0.04
ABR-208ENST00000570688 ZNF316A6NFI3 1004 aaPredicted RBP15.29■□□□□ 0.04
ABR-208ENST00000570688 HSP90AB2PQ58FF8 381 aa15.29■□□□□ 0.04
ABR-208ENST00000570688 WDR17Q8IZU2 1322 aa15.28■□□□□ 0.04
ABR-208ENST00000570688 RBM6P78332 1123 aaKnown RBP15.28■□□□□ 0.04
ABR-208ENST00000570688 CNGB1Q14028 1251 aaPredicted RBP15.28■□□□□ 0.04
ABR-208ENST00000570688 BLMP54132 1417 aaPredicted RBP15.27■□□□□ 0.04
ABR-208ENST00000570688 RTL1A6NKG5 1358 aa15.27■□□□□ 0.04
ABR-208ENST00000570688 RXRBP28702 533 aa15.27■□□□□ 0.04
ABR-208ENST00000570688 MORC1Q86VD1 984 aa15.27■□□□□ 0.04
ABR-208ENST00000570688 CDK12Q9NYV4 1490 aaPredicted RBP15.27■□□□□ 0.03
ABR-208ENST00000570688 CRB1P82279 1406 aa15.26■□□□□ 0.03
ABR-208ENST00000570688 ONECUT3O60422 494 aaPredicted RBP15.26■□□□□ 0.03
ABR-208ENST00000570688 ANKRD24Q8TF21 1146 aa15.26■□□□□ 0.03
ABR-208ENST00000570688 DISP2A7MBM2 1401 aa15.26■□□□□ 0.03
ABR-208ENST00000570688 INSRP06213 1382 aa15.25■□□□□ 0.03
ABR-208ENST00000570688 FLT4P35916 1363 aa15.25■□□□□ 0.03
ABR-208ENST00000570688 COL3A1P02461 1466 aaPredicted RBP15.25■□□□□ 0.03
ABR-208ENST00000570688 AMPHP49418 695 aa15.24■□□□□ 0.03
ABR-208ENST00000570688 FAM98CQ17RN3 349 aaKnown RBP15.24■□□□□ 0.03
ABR-208ENST00000570688 LTV1Q96GA3 475 aaPredicted RBP15.24■□□□□ 0.03
ABR-208ENST00000570688 USP35Q9P2H5 1018 aa15.24■□□□□ 0.03
ABR-208ENST00000570688 KIF24Q5T7B8 1368 aa15.24■□□□□ 0.03
ABR-208ENST00000570688 PARD3Q8TEW0 1356 aa15.24■□□□□ 0.03
ABR-208ENST00000570688 EVA1CP58658 441 aa15.23■□□□□ 0.03
ABR-208ENST00000570688 NBPF6Q5VWK0 638 aa15.23■□□□□ 0.03
ABR-208ENST00000570688 NBPF4Q96M43 638 aa15.23■□□□□ 0.03
ABR-208ENST00000570688 NCAPD2Q15021 1401 aa15.23■□□□□ 0.03
ABR-208ENST00000570688 RGPD1P0DJD0 1748 aa15.23■□□□□ 0.03
ABR-208ENST00000570688 LRRC37A3O60309 1634 aa15.22■□□□□ 0.03
ABR-208ENST00000570688 CCDC9Q9Y3X0 531 aaKnown RBP15.22■□□□□ 0.03
ABR-208ENST00000570688 PARP4Q9UKK3 1724 aaKnown RBP15.22■□□□□ 0.03
ABR-208ENST00000570688 PPM1GO15355 546 aaPredicted RBP15.21■□□□□ 0.03
ABR-208ENST00000570688 MTHFSP49914 203 aa15.21■□□□□ 0.03
ABR-208ENST00000570688 EIF4A2Q14240 407 aaKnown RBP15.21■□□□□ 0.03
ABR-208ENST00000570688 TOM1L2Q6ZVM7 507 aa15.21■□□□□ 0.03
ABR-208ENST00000570688 SEPT12Q8IYM1 358 aa15.21■□□□□ 0.03
ABR-208ENST00000570688 USHBP1Q8N6Y0 703 aa15.21■□□□□ 0.03
ABR-208ENST00000570688 CARD10Q9BWT7 1032 aa15.21■□□□□ 0.03
ABR-208ENST00000570688 SHANK3Q9BYB0 1731 aa15.2■□□□□ 0.02
ABR-208ENST00000570688 PPP2R1AP30153 589 aa15.2■□□□□ 0.02
ABR-208ENST00000570688 BARGINQ6ZT62 677 aa15.2■□□□□ 0.02
ABR-208ENST00000570688 TCP11L2Q8N4U5 519 aa15.2■□□□□ 0.02
ABR-208ENST00000570688 MEGF6O75095 1541 aa15.2■□□□□ 0.02
ABR-208ENST00000570688 CSB-PGBD3P0DP91 1061 aa15.18■□□□□ 0.02
ABR-208ENST00000570688 EYA1Q99502 592 aa15.18■□□□□ 0.02
ABR-208ENST00000570688 NLRP2Q9NX02 1062 aa15.18■□□□□ 0.02
ABR-208ENST00000570688 IL13P35225 146 aa15.17■□□□□ 0.02
ABR-208ENST00000570688 FAM182BQ5T319 152 aa15.17■□□□□ 0.02
ABR-208ENST00000570688 EP400Q96L91 3159 aa15.16■□□□□ 0.02
ABR-208ENST00000570688 THRAP3Q9Y2W1 955 aaKnown RBP15.16■□□□□ 0.02
ABR-208ENST00000570688 IGSF1Q8N6C5 1336 aa15.15■□□□□ 0.02
ABR-208ENST00000570688 AEBP1Q8IUX7 1158 aa15.14■□□□□ 0.01
ABR-208ENST00000570688 PRKRIP1Q9H875 184 aaPredicted RBP15.13■□□□□ 0.01
ABR-208ENST00000570688 PKD1L3Q7Z443 1732 aa15.12■□□□□ 0.01
ABR-208ENST00000570688 OVOS2A0A0G2JMS6 1433 aa15.12■□□□□ 0.01
ABR-208ENST00000570688 TNS2Q63HR2 1409 aa15.12■□□□□ 0.01
ABR-208ENST00000570688 MARCH10Q8NA82 808 aaPredicted RBP15.12■□□□□ 0.01
ABR-208ENST00000570688 SBF2Q86WG5 1849 aa15.11■□□□□ 0.01
ABR-208ENST00000570688 IL2RBP14784 551 aa15.11■□□□□ 0.01
ABR-208ENST00000570688 CCDC184Q52MB2 194 aa15.11■□□□□ 0.01
ABR-208ENST00000570688 PTF1AQ7RTS3 328 aa15.1■□□□□ 0.01
ABR-208ENST00000570688 KRT27Q7Z3Y8 459 aa15.1■□□□□ 0.01
ABR-208ENST00000570688 KDRP35968 1356 aa15.1■□□□□ 0.01
ABR-208ENST00000570688 A0A0G2JS52 829 aa15.09■□□□□ 0.01
ABR-208ENST00000570688 MYT1Q01538 1121 aa15.09■□□□□ 0.01
ABR-208ENST00000570688 RALBP1Q15311 655 aa15.08■□□□□ 0
ABR-208ENST00000570688 TNS1Q9HBL0 1735 aaKnown RBP15.07■□□□□ 0
ABR-208ENST00000570688 TOGARAM1Q9Y4F4 1720 aa15.07■□□□□ 0
ABR-208ENST00000570688 DIAPH1O60610 1272 aaKnown RBP15.07■□□□□ 0
ABR-208ENST00000570688 DDB1Q16531 1140 aa15.07■□□□□ 0
ABR-208ENST00000570688 UPF1Q92900 1129 aaKnown RBP eCLIP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms