RNA–Protein interactions for RNA: ENST00000570169.1

TRAF7-207, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-207ENST00000570169 CFAP53Q96M91 514 aa27.81■■■□□ 2.04
TRAF7-207ENST00000570169 ABCC6O95255 1503 aa27.81■■■□□ 2.04
TRAF7-207ENST00000570169 MAP2P11137 1827 aaKnown RBP27.81■■■□□ 2.04
TRAF7-207ENST00000570169 HOXC9P31274 260 aa27.8■■■□□ 2.04
TRAF7-207ENST00000570169 SMG6Q86US8 1419 aaKnown RBP27.79■■■□□ 2.04
TRAF7-207ENST00000570169 BLMP54132 1417 aaPredicted RBP27.78■■■□□ 2.04
TRAF7-207ENST00000570169 EVA1CP58658 441 aa27.78■■■□□ 2.04
TRAF7-207ENST00000570169 BTG4Q9NY30 223 aa27.77■■■□□ 2.04
TRAF7-207ENST00000570169 CDK12Q9NYV4 1490 aaPredicted RBP27.76■■■□□ 2.03
TRAF7-207ENST00000570169 INSRP06213 1382 aa27.75■■■□□ 2.03
TRAF7-207ENST00000570169 HSP90AB2PQ58FF8 381 aa27.74■■■□□ 2.03
TRAF7-207ENST00000570169 FNBP4Q8N3X1 1017 aaPredicted RBP27.74■■■□□ 2.03
TRAF7-207ENST00000570169 CSB-PGBD3P0DP91 1061 aa27.73■■■□□ 2.03
TRAF7-207ENST00000570169 AXIN2Q9Y2T1 843 aa27.73■■■□□ 2.03
TRAF7-207ENST00000570169 STRN4Q9NRL3 753 aa27.72■■■□□ 2.03
TRAF7-207ENST00000570169 USP21Q9UK80 565 aa27.72■■■□□ 2.03
TRAF7-207ENST00000570169 SLIT2O94813 1529 aa27.72■■■□□ 2.03
TRAF7-207ENST00000570169 LMO7Q8WWI1 1683 aa27.72■■■□□ 2.03
TRAF7-207ENST00000570169 AFF2P51816 1311 aa27.71■■■□□ 2.03
TRAF7-207ENST00000570169 COL18A1P39060 1754 aa27.71■■■□□ 2.03
TRAF7-207ENST00000570169 ANKRD24Q8TF21 1146 aa27.71■■■□□ 2.03
TRAF7-207ENST00000570169 LTV1Q96GA3 475 aaPredicted RBP27.71■■■□□ 2.03
TRAF7-207ENST00000570169 PEAK1Q9H792 1746 aa27.71■■■□□ 2.03
TRAF7-207ENST00000570169 CAMTA1Q9Y6Y1 1673 aa27.71■■■□□ 2.03
TRAF7-207ENST00000570169 UNC5CLQ8IV45 518 aa27.7■■■□□ 2.02
TRAF7-207ENST00000570169 PLCH1Q4KWH8 1693 aa27.7■■■□□ 2.02
TRAF7-207ENST00000570169 NWD2Q9ULI1 1742 aa27.7■■■□□ 2.02
TRAF7-207ENST00000570169 DIAPH1O60610 1272 aaKnown RBP27.68■■■□□ 2.02
TRAF7-207ENST00000570169 PHF23Q9BUL5 403 aaPredicted RBP27.68■■■□□ 2.02
TRAF7-207ENST00000570169 COL5A2P05997 1499 aaPredicted RBP27.68■■■□□ 2.02
TRAF7-207ENST00000570169 ERBB3P21860 1342 aa27.67■■■□□ 2.02
TRAF7-207ENST00000570169 ZNF772Q68DY9 489 aaPredicted RBP27.67■■■□□ 2.02
TRAF7-207ENST00000570169 NUDCQ9Y266 331 aa27.67■■■□□ 2.02
TRAF7-207ENST00000570169 WDR17Q8IZU2 1322 aa27.67■■■□□ 2.02
TRAF7-207ENST00000570169 TOM1L2Q6ZVM7 507 aa27.66■■■□□ 2.02
TRAF7-207ENST00000570169 EIF4A2Q14240 407 aaKnown RBP27.65■■■□□ 2.02
TRAF7-207ENST00000570169 RGPD5Q99666 1765 aa27.64■■■□□ 2.02
TRAF7-207ENST00000570169 NLRP2Q9NX02 1062 aa27.64■■■□□ 2.02
TRAF7-207ENST00000570169 CCDC9Q9Y3X0 531 aaKnown RBP27.64■■■□□ 2.02
TRAF7-207ENST00000570169 BCL9LQ86UU0 1499 aa27.63■■■□□ 2.01
TRAF7-207ENST00000570169 LARP1Q6PKG0 1096 aaKnown RBP27.62■■■□□ 2.01
TRAF7-207ENST00000570169 TRPC5Q9UL62 973 aaPredicted RBP27.62■■■□□ 2.01
TRAF7-207ENST00000570169 VPS72Q15906 364 aa27.61■■■□□ 2.01
TRAF7-207ENST00000570169 MRS2Q9HD23 443 aa27.61■■■□□ 2.01
TRAF7-207ENST00000570169 CRB1P82279 1406 aa27.6■■■□□ 2.01
TRAF7-207ENST00000570169 IL13P35225 146 aa27.6■■■□□ 2.01
TRAF7-207ENST00000570169 NRAPQ86VF7 1730 aa27.6■■■□□ 2.01
TRAF7-207ENST00000570169 COL3A1P02461 1466 aaPredicted RBP27.59■■■□□ 2.01
TRAF7-207ENST00000570169 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.59■■■□□ 2.01
TRAF7-207ENST00000570169 CCER2I3L3R5 266 aa27.59■■■□□ 2.01
TRAF7-207ENST00000570169 U2SURPO15042 1029 aaKnown RBP27.59■■■□□ 2.01
TRAF7-207ENST00000570169 MIER1Q8N108 512 aa27.59■■■□□ 2.01
TRAF7-207ENST00000570169 CARD10Q9BWT7 1032 aa27.59■■■□□ 2.01
TRAF7-207ENST00000570169 FAM208AQ9UK61 1670 aaKnown RBP27.59■■■□□ 2.01
TRAF7-207ENST00000570169 QTRT2Q9H974 415 aaKnown RBP27.58■■■□□ 2.01
TRAF7-207ENST00000570169 WDR43Q15061 677 aaKnown RBP eCLIP27.56■■■□□ 2
TRAF7-207ENST00000570169 NBPF6Q5VWK0 638 aa27.55■■■□□ 2
TRAF7-207ENST00000570169 NBPF4Q96M43 638 aa27.55■■■□□ 2
TRAF7-207ENST00000570169 EYA1Q99502 592 aa27.55■■■□□ 2
TRAF7-207ENST00000570169 USP35Q9P2H5 1018 aa27.55■■■□□ 2
TRAF7-207ENST00000570169 SPATA31A5Q5VU36 1347 aa27.55■■■□□ 2
TRAF7-207ENST00000570169 SPATA31A7Q8IWB4 1347 aa27.55■■■□□ 2
TRAF7-207ENST00000570169 ATRNO75882 1429 aa27.54■■■□□ 2
TRAF7-207ENST00000570169 THRAP3Q9Y2W1 955 aaKnown RBP27.54■■■□□ 2
TRAF7-207ENST00000570169 SPATA31A1Q5TZJ5 1347 aa27.53■■■□□ 2
TRAF7-207ENST00000570169 IGSF1Q8N6C5 1336 aa27.53■■■□□ 2
TRAF7-207ENST00000570169 U2AF1L5P0DN76 240 aaPredicted RBP27.53■■■□□ 2
TRAF7-207ENST00000570169 U2AF1Q01081 240 aaKnown RBP eCLIP27.53■■■□□ 2
TRAF7-207ENST00000570169 TCP11L2Q8N4U5 519 aa27.53■■■□□ 2
TRAF7-207ENST00000570169 GJD4Q96KN9 370 aaPredicted RBP27.52■■■□□ 2
TRAF7-207ENST00000570169 USHBP1Q8N6Y0 703 aa27.5■■□□□ 1.99
TRAF7-207ENST00000570169 CCDC184Q52MB2 194 aa27.49■■□□□ 1.99
TRAF7-207ENST00000570169 SULT6B1Q6IMI4 303 aa27.49■■□□□ 1.99
TRAF7-207ENST00000570169 RAPGEF4Q8WZA2 1011 aa27.49■■□□□ 1.99
TRAF7-207ENST00000570169 PNNQ9H307 717 aaKnown RBP27.49■■□□□ 1.99
TRAF7-207ENST00000570169 CDCA7Q9BWT1 371 aaPredicted RBP27.48■■□□□ 1.99
TRAF7-207ENST00000570169 RBM6P78332 1123 aaKnown RBP27.47■■□□□ 1.99
TRAF7-207ENST00000570169 HMOX1P09601 288 aa27.46■■□□□ 1.99
TRAF7-207ENST00000570169 BARGINQ6ZT62 677 aa27.46■■□□□ 1.99
TRAF7-207ENST00000570169 RGPD2P0DJD1 1756 aa27.45■■□□□ 1.99
TRAF7-207ENST00000570169 NEFMP07197 916 aa27.45■■□□□ 1.98
TRAF7-207ENST00000570169 IL2RBP14784 551 aa27.45■■□□□ 1.98
TRAF7-207ENST00000570169 TATP17735 454 aaPredicted RBP27.45■■□□□ 1.98
TRAF7-207ENST00000570169 RXRBP28702 533 aa27.45■■□□□ 1.98
TRAF7-207ENST00000570169 RGS17Q9UGC6 210 aaPredicted RBP27.45■■□□□ 1.98
TRAF7-207ENST00000570169 RGPD1P0DJD0 1748 aa27.44■■□□□ 1.98
TRAF7-207ENST00000570169 NCAPD2Q15021 1401 aa27.44■■□□□ 1.98
TRAF7-207ENST00000570169 FCHSD2O94868 740 aa27.44■■□□□ 1.98
TRAF7-207ENST00000570169 PNISRQ8TF01 805 aaKnown RBP27.44■■□□□ 1.98
TRAF7-207ENST00000570169 A0A0G2JS52 829 aa27.43■■□□□ 1.98
TRAF7-207ENST00000570169 MYT1Q01538 1121 aa27.43■■□□□ 1.98
TRAF7-207ENST00000570169 FAM98CQ17RN3 349 aaKnown RBP27.43■■□□□ 1.98
TRAF7-207ENST00000570169 KDRP35968 1356 aa27.43■■□□□ 1.98
TRAF7-207ENST00000570169 AEBP1Q8IUX7 1158 aa27.42■■□□□ 1.98
TRAF7-207ENST00000570169 ADAMTS8Q9UP79 889 aa27.4■■□□□ 1.98
TRAF7-207ENST00000570169 POTEAQ6S8J7 498 aa27.39■■□□□ 1.98
TRAF7-207ENST00000570169 RSPH6AQ9H0K4 717 aa27.39■■□□□ 1.98
TRAF7-207ENST00000570169 GLI3P10071 1580 aa27.39■■□□□ 1.97
TRAF7-207ENST00000570169 PLEKHG2Q9H7P9 1386 aa27.38■■□□□ 1.97
TRAF7-207ENST00000570169 PRKAR2BP31323 418 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms