RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 LTN1O94822 1766 aa16.57■□□□□ 0.24
NUP93-220ENST00000569842 CDK12Q9NYV4 1490 aaPredicted RBP16.57■□□□□ 0.24
NUP93-220ENST00000569842 KIF24Q5T7B8 1368 aa16.57■□□□□ 0.24
NUP93-220ENST00000569842 RTL1A6NKG5 1358 aa16.56■□□□□ 0.24
NUP93-220ENST00000569842 FAM83GA6ND36 823 aa16.56■□□□□ 0.24
NUP93-220ENST00000569842 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
NUP93-220ENST00000569842 INSRP06213 1382 aa16.55■□□□□ 0.24
NUP93-220ENST00000569842 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
NUP93-220ENST00000569842 DIAPH1O60610 1272 aaKnown RBP16.53■□□□□ 0.24
NUP93-220ENST00000569842 LRP6O75581 1613 aa16.53■□□□□ 0.24
NUP93-220ENST00000569842 COL3A1P02461 1466 aaPredicted RBP16.53■□□□□ 0.24
NUP93-220ENST00000569842 EIF4A2Q14240 407 aaKnown RBP16.53■□□□□ 0.24
NUP93-220ENST00000569842 BLMP54132 1417 aaPredicted RBP16.52■□□□□ 0.24
NUP93-220ENST00000569842 IL13P35225 146 aa16.51■□□□□ 0.23
NUP93-220ENST00000569842 COL18A1P39060 1754 aa16.51■□□□□ 0.23
NUP93-220ENST00000569842 ANKRD24Q8TF21 1146 aa16.51■□□□□ 0.23
NUP93-220ENST00000569842 C8orf37Q96NL8 207 aa16.51■□□□□ 0.23
NUP93-220ENST00000569842 BTG4Q9NY30 223 aa16.51■□□□□ 0.23
NUP93-220ENST00000569842 ABCC6O95255 1503 aa16.5■□□□□ 0.23
NUP93-220ENST00000569842 CAMTA1Q9Y6Y1 1673 aa16.5■□□□□ 0.23
NUP93-220ENST00000569842 MEX3CQ5U5Q3 659 aaKnown RBP16.5■□□□□ 0.23
NUP93-220ENST00000569842 PNISRQ8TF01 805 aaKnown RBP16.5■□□□□ 0.23
NUP93-220ENST00000569842 NUDCQ9Y266 331 aa16.5■□□□□ 0.23
NUP93-220ENST00000569842 U2SURPO15042 1029 aaKnown RBP16.5■□□□□ 0.23
NUP93-220ENST00000569842 LMO7Q8WWI1 1683 aa16.49■□□□□ 0.23
NUP93-220ENST00000569842 ERBB3P21860 1342 aa16.49■□□□□ 0.23
NUP93-220ENST00000569842 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
NUP93-220ENST00000569842 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
NUP93-220ENST00000569842 NGLY1Q96IV0 654 aa16.49■□□□□ 0.23
NUP93-220ENST00000569842 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
NUP93-220ENST00000569842 CSB-PGBD3P0DP91 1061 aa16.48■□□□□ 0.23
NUP93-220ENST00000569842 STRN4Q9NRL3 753 aa16.48■□□□□ 0.23
NUP93-220ENST00000569842 RGPD5Q99666 1765 aa16.48■□□□□ 0.23
NUP93-220ENST00000569842 EVA1CP58658 441 aa16.47■□□□□ 0.23
NUP93-220ENST00000569842 U2AF1L5P0DN76 240 aaPredicted RBP16.47■□□□□ 0.23
NUP93-220ENST00000569842 U2AF1Q01081 240 aaKnown RBP eCLIP16.47■□□□□ 0.23
NUP93-220ENST00000569842 COL5A2P05997 1499 aaPredicted RBP16.47■□□□□ 0.23
NUP93-220ENST00000569842 EYA1Q99502 592 aa16.46■□□□□ 0.23
NUP93-220ENST00000569842 ADAMTS8Q9UP79 889 aa16.46■□□□□ 0.22
NUP93-220ENST00000569842 NBPF6Q5VWK0 638 aa16.45■□□□□ 0.22
NUP93-220ENST00000569842 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
NUP93-220ENST00000569842 NBPF4Q96M43 638 aa16.45■□□□□ 0.22
NUP93-220ENST00000569842 NLRP2Q9NX02 1062 aa16.45■□□□□ 0.22
NUP93-220ENST00000569842 SLIT2O94813 1529 aa16.45■□□□□ 0.22
NUP93-220ENST00000569842 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
NUP93-220ENST00000569842 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
NUP93-220ENST00000569842 PLCH1Q4KWH8 1693 aa16.44■□□□□ 0.22
NUP93-220ENST00000569842 HMOX1P09601 288 aa16.44■□□□□ 0.22
NUP93-220ENST00000569842 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
NUP93-220ENST00000569842 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
NUP93-220ENST00000569842 IGSF1Q8N6C5 1336 aa16.43■□□□□ 0.22
NUP93-220ENST00000569842 TOM1L2Q6ZVM7 507 aa16.43■□□□□ 0.22
NUP93-220ENST00000569842 SULT6B1Q6IMI4 303 aa16.43■□□□□ 0.22
NUP93-220ENST00000569842 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
NUP93-220ENST00000569842 UNC5CLQ8IV45 518 aa16.42■□□□□ 0.22
NUP93-220ENST00000569842 USP21Q9UK80 565 aa16.41■□□□□ 0.22
NUP93-220ENST00000569842 AFF2P51816 1311 aa16.41■□□□□ 0.22
NUP93-220ENST00000569842 BCL9LQ86UU0 1499 aa16.41■□□□□ 0.22
NUP93-220ENST00000569842 RGPD1P0DJD0 1748 aa16.41■□□□□ 0.22
NUP93-220ENST00000569842 NWD2Q9ULI1 1742 aa16.4■□□□□ 0.22
NUP93-220ENST00000569842 FCHSD2O94868 740 aa16.4■□□□□ 0.22
NUP93-220ENST00000569842 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
NUP93-220ENST00000569842 CRB1P82279 1406 aa16.4■□□□□ 0.22
NUP93-220ENST00000569842 RGPD2P0DJD1 1756 aa16.39■□□□□ 0.22
NUP93-220ENST00000569842 CARD10Q9BWT7 1032 aa16.39■□□□□ 0.21
NUP93-220ENST00000569842 RSPH6AQ9H0K4 717 aa16.39■□□□□ 0.21
NUP93-220ENST00000569842 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
NUP93-220ENST00000569842 CCDC146Q8IYE0 955 aa16.39■□□□□ 0.21
NUP93-220ENST00000569842 KDRP35968 1356 aa16.38■□□□□ 0.21
NUP93-220ENST00000569842 PRKAR2BP31323 418 aa16.38■□□□□ 0.21
NUP93-220ENST00000569842 CCDC9Q9Y3X0 531 aaKnown RBP16.38■□□□□ 0.21
NUP93-220ENST00000569842 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
NUP93-220ENST00000569842 NCAPD2Q15021 1401 aa16.37■□□□□ 0.21
NUP93-220ENST00000569842 VPS72Q15906 364 aa16.37■□□□□ 0.21
NUP93-220ENST00000569842 PLEKHF1Q96S99 279 aa16.36■□□□□ 0.21
NUP93-220ENST00000569842 PNNQ9H307 717 aaKnown RBP16.36■□□□□ 0.21
NUP93-220ENST00000569842 SPATA31A5Q5VU36 1347 aa16.36■□□□□ 0.21
NUP93-220ENST00000569842 SPATA31A7Q8IWB4 1347 aa16.36■□□□□ 0.21
NUP93-220ENST00000569842 RUNDC1Q96C34 613 aa16.35■□□□□ 0.21
NUP93-220ENST00000569842 SPATA31A1Q5TZJ5 1347 aa16.35■□□□□ 0.21
NUP93-220ENST00000569842 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
NUP93-220ENST00000569842 TCP11L2Q8N4U5 519 aa16.34■□□□□ 0.21
NUP93-220ENST00000569842 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
NUP93-220ENST00000569842 PHACTR3Q96KR7 559 aa16.34■□□□□ 0.21
NUP93-220ENST00000569842 MAPK8IP3Q9UPT6 1336 aa16.33■□□□□ 0.21
NUP93-220ENST00000569842 NEFMP07197 916 aa16.33■□□□□ 0.21
NUP93-220ENST00000569842 TRPC5Q9UL62 973 aaPredicted RBP16.33■□□□□ 0.2
NUP93-220ENST00000569842 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.33■□□□□ 0.2
NUP93-220ENST00000569842 TATP17735 454 aaPredicted RBP16.32■□□□□ 0.2
NUP93-220ENST00000569842 QTRT2Q9H974 415 aaKnown RBP16.32■□□□□ 0.2
NUP93-220ENST00000569842 IL2RBP14784 551 aa16.32■□□□□ 0.2
NUP93-220ENST00000569842 MEGF6O75095 1541 aa16.32■□□□□ 0.2
NUP93-220ENST00000569842 APAF1O14727 1248 aa16.32■□□□□ 0.2
NUP93-220ENST00000569842 ZNF772Q68DY9 489 aaPredicted RBP16.32■□□□□ 0.2
NUP93-220ENST00000569842 ATRNO75882 1429 aa16.31■□□□□ 0.2
NUP93-220ENST00000569842 THRAP3Q9Y2W1 955 aaKnown RBP16.31■□□□□ 0.2
NUP93-220ENST00000569842 GJD4Q96KN9 370 aaPredicted RBP16.31■□□□□ 0.2
NUP93-220ENST00000569842 YTHDC1Q96MU7 727 aaKnown RBP16.29■□□□□ 0.2
NUP93-220ENST00000569842 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
NUP93-220ENST00000569842 FAM98CQ17RN3 349 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms