RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 ZC3H6P61129 1189 aaKnown RBP20.91■□□□□ 0.94
SNHG20-204ENST00000566583 HOXC9P31274 260 aa20.9■□□□□ 0.94
SNHG20-204ENST00000566583 IP6K1Q92551 441 aa20.9■□□□□ 0.94
SNHG20-204ENST00000566583 CAMTA1Q9Y6Y1 1673 aa20.9■□□□□ 0.94
SNHG20-204ENST00000566583 NRAPQ86VF7 1730 aa20.9■□□□□ 0.94
SNHG20-204ENST00000566583 FAM208AQ9UK61 1670 aaKnown RBP20.89■□□□□ 0.93
SNHG20-204ENST00000566583 BLMP54132 1417 aaPredicted RBP20.89■□□□□ 0.93
SNHG20-204ENST00000566583 AXIN2Q9Y2T1 843 aa20.87■□□□□ 0.93
SNHG20-204ENST00000566583 FAM83GA6ND36 823 aa20.86■□□□□ 0.93
SNHG20-204ENST00000566583 AMPHP49418 695 aa20.86■□□□□ 0.93
SNHG20-204ENST00000566583 HSP90AB2PQ58FF8 381 aa20.86■□□□□ 0.93
SNHG20-204ENST00000566583 HAP1P54257 671 aaPredicted RBP20.85■□□□□ 0.93
SNHG20-204ENST00000566583 CHRNA2Q15822 529 aa20.85■□□□□ 0.93
SNHG20-204ENST00000566583 SLIT2O94813 1529 aa20.85■□□□□ 0.93
SNHG20-204ENST00000566583 PRDM11Q9NQV5 511 aa20.84■□□□□ 0.93
SNHG20-204ENST00000566583 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.84■□□□□ 0.93
SNHG20-204ENST00000566583 NUTM2BA6NNL0 878 aaPredicted RBP20.83■□□□□ 0.93
SNHG20-204ENST00000566583 NUTM2EB1AL46 878 aaPredicted RBP20.83■□□□□ 0.93
SNHG20-204ENST00000566583 PPM1GO15355 546 aaPredicted RBP20.83■□□□□ 0.93
SNHG20-204ENST00000566583 IL13P35225 146 aa20.83■□□□□ 0.93
SNHG20-204ENST00000566583 NUTM2AQ8IVF1 878 aaPredicted RBP20.83■□□□□ 0.93
SNHG20-204ENST00000566583 MRS2Q9HD23 443 aa20.83■□□□□ 0.93
SNHG20-204ENST00000566583 COL5A2P05997 1499 aaPredicted RBP20.83■□□□□ 0.92
SNHG20-204ENST00000566583 EIF4A2Q14240 407 aaKnown RBP20.82■□□□□ 0.92
SNHG20-204ENST00000566583 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
SNHG20-204ENST00000566583 NCAPD2Q15021 1401 aa20.82■□□□□ 0.92
SNHG20-204ENST00000566583 PNISRQ8TF01 805 aaKnown RBP20.81■□□□□ 0.92
SNHG20-204ENST00000566583 ERBB3P21860 1342 aa20.81■□□□□ 0.92
SNHG20-204ENST00000566583 ADAMTS2O95450 1211 aa20.8■□□□□ 0.92
SNHG20-204ENST00000566583 ZBTB7CA1YPR0 619 aa20.79■□□□□ 0.92
SNHG20-204ENST00000566583 DIAPH1O60610 1272 aaKnown RBP20.79■□□□□ 0.92
SNHG20-204ENST00000566583 WNK3Q9BYP7 1800 aa20.77■□□□□ 0.91
SNHG20-204ENST00000566583 ANKRD24Q8TF21 1146 aa20.77■□□□□ 0.91
SNHG20-204ENST00000566583 BCL9LQ86UU0 1499 aa20.76■□□□□ 0.91
SNHG20-204ENST00000566583 IGSF1Q8N6C5 1336 aa20.76■□□□□ 0.91
SNHG20-204ENST00000566583 FNBP4Q8N3X1 1017 aaPredicted RBP20.76■□□□□ 0.91
SNHG20-204ENST00000566583 EYA1Q99502 592 aa20.75■□□□□ 0.91
SNHG20-204ENST00000566583 BTG4Q9NY30 223 aa20.75■□□□□ 0.91
SNHG20-204ENST00000566583 WDR17Q8IZU2 1322 aa20.74■□□□□ 0.91
SNHG20-204ENST00000566583 KDRP35968 1356 aa20.74■□□□□ 0.91
SNHG20-204ENST00000566583 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
SNHG20-204ENST00000566583 LTV1Q96GA3 475 aaPredicted RBP20.73■□□□□ 0.91
SNHG20-204ENST00000566583 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
SNHG20-204ENST00000566583 NUDCQ9Y266 331 aa20.72■□□□□ 0.91
SNHG20-204ENST00000566583 ILDR1Q86SU0 546 aaPredicted RBP20.71■□□□□ 0.91
SNHG20-204ENST00000566583 C8orf37Q96NL8 207 aa20.71■□□□□ 0.91
SNHG20-204ENST00000566583 ADAMTS8Q9UP79 889 aa20.71■□□□□ 0.91
SNHG20-204ENST00000566583 CRB1P82279 1406 aa20.71■□□□□ 0.91
SNHG20-204ENST00000566583 NGLY1Q96IV0 654 aa20.7■□□□□ 0.9
SNHG20-204ENST00000566583 LARP1Q6PKG0 1096 aaKnown RBP20.69■□□□□ 0.9
SNHG20-204ENST00000566583 U2SURPO15042 1029 aaKnown RBP20.68■□□□□ 0.9
SNHG20-204ENST00000566583 U2AF1L5P0DN76 240 aaPredicted RBP20.68■□□□□ 0.9
SNHG20-204ENST00000566583 U2AF1Q01081 240 aaKnown RBP eCLIP20.68■□□□□ 0.9
SNHG20-204ENST00000566583 UNC5CLQ8IV45 518 aa20.68■□□□□ 0.9
SNHG20-204ENST00000566583 RSPH6AQ9H0K4 717 aa20.68■□□□□ 0.9
SNHG20-204ENST00000566583 PARP4Q9UKK3 1724 aaKnown RBP20.68■□□□□ 0.9
SNHG20-204ENST00000566583 DLG5Q8TDM6 1919 aa20.68■□□□□ 0.9
SNHG20-204ENST00000566583 WDR43Q15061 677 aaKnown RBP eCLIP20.67■□□□□ 0.9
SNHG20-204ENST00000566583 AEBP1Q8IUX7 1158 aa20.67■□□□□ 0.9
SNHG20-204ENST00000566583 CARD10Q9BWT7 1032 aa20.67■□□□□ 0.9
SNHG20-204ENST00000566583 PKD1L3Q7Z443 1732 aa20.67■□□□□ 0.9
SNHG20-204ENST00000566583 AFF2P51816 1311 aa20.67■□□□□ 0.9
SNHG20-204ENST00000566583 FCHSD2O94868 740 aa20.66■□□□□ 0.9
SNHG20-204ENST00000566583 MEX3CQ5U5Q3 659 aaKnown RBP20.66■□□□□ 0.9
SNHG20-204ENST00000566583 PLEKHF1Q96S99 279 aa20.66■□□□□ 0.9
SNHG20-204ENST00000566583 STRN4Q9NRL3 753 aa20.66■□□□□ 0.9
SNHG20-204ENST00000566583 ATRNO75882 1429 aa20.65■□□□□ 0.9
SNHG20-204ENST00000566583 SHANK3Q9BYB0 1731 aa20.65■□□□□ 0.9
SNHG20-204ENST00000566583 EVA1CP58658 441 aa20.65■□□□□ 0.9
SNHG20-204ENST00000566583 SULT6B1Q6IMI4 303 aa20.65■□□□□ 0.9
SNHG20-204ENST00000566583 FAM9BQ8IZU0 186 aa20.65■□□□□ 0.9
SNHG20-204ENST00000566583 USHBP1Q8N6Y0 703 aa20.65■□□□□ 0.9
SNHG20-204ENST00000566583 GLI3P10071 1580 aa20.64■□□□□ 0.9
SNHG20-204ENST00000566583 HMOX1P09601 288 aa20.64■□□□□ 0.89
SNHG20-204ENST00000566583 CSB-PGBD3P0DP91 1061 aa20.64■□□□□ 0.89
SNHG20-204ENST00000566583 NLRP2Q9NX02 1062 aa20.64■□□□□ 0.89
SNHG20-204ENST00000566583 SPATA31A5Q5VU36 1347 aa20.64■□□□□ 0.89
SNHG20-204ENST00000566583 SPATA31A7Q8IWB4 1347 aa20.64■□□□□ 0.89
SNHG20-204ENST00000566583 DISP2A7MBM2 1401 aa20.64■□□□□ 0.89
SNHG20-204ENST00000566583 VIRMAQ69YN4 1812 aaKnown RBP20.63■□□□□ 0.89
SNHG20-204ENST00000566583 VPS72Q15906 364 aa20.63■□□□□ 0.89
SNHG20-204ENST00000566583 TOM1L2Q6ZVM7 507 aa20.63■□□□□ 0.89
SNHG20-204ENST00000566583 USP21Q9UK80 565 aa20.63■□□□□ 0.89
SNHG20-204ENST00000566583 SPATA31A1Q5TZJ5 1347 aa20.63■□□□□ 0.89
SNHG20-204ENST00000566583 PLEKHG2Q9H7P9 1386 aa20.63■□□□□ 0.89
SNHG20-204ENST00000566583 MEGF6O75095 1541 aa20.63■□□□□ 0.89
SNHG20-204ENST00000566583 THSD7AQ9UPZ6 1657 aa20.6■□□□□ 0.89
SNHG20-204ENST00000566583 PRKAR2BP31323 418 aa20.6■□□□□ 0.89
SNHG20-204ENST00000566583 OVOS2A0A0G2JMS6 1433 aa20.59■□□□□ 0.89
SNHG20-204ENST00000566583 RUNDC1Q96C34 613 aa20.58■□□□□ 0.89
SNHG20-204ENST00000566583 PHACTR3Q96KR7 559 aa20.58■□□□□ 0.89
SNHG20-204ENST00000566583 LRRC37A3O60309 1634 aa20.57■□□□□ 0.88
SNHG20-204ENST00000566583 CCDC146Q8IYE0 955 aa20.57■□□□□ 0.88
SNHG20-204ENST00000566583 THRAP3Q9Y2W1 955 aaKnown RBP20.57■□□□□ 0.88
SNHG20-204ENST00000566583 BARGINQ6ZT62 677 aa20.56■□□□□ 0.88
SNHG20-204ENST00000566583 TCP11L2Q8N4U5 519 aa20.56■□□□□ 0.88
SNHG20-204ENST00000566583 PNNQ9H307 717 aaKnown RBP20.56■□□□□ 0.88
SNHG20-204ENST00000566583 RGS17Q9UGC6 210 aaPredicted RBP20.55■□□□□ 0.88
SNHG20-204ENST00000566583 TRPC5Q9UL62 973 aaPredicted RBP20.55■□□□□ 0.88
SNHG20-204ENST00000566583 ADAMTS7Q9UKP4 1686 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms