RNA–Protein interactions for RNA: ENST00000565986.1

PDXDC1-212, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-212ENST00000565986 COL18A1P39060 1754 aa17.74■□□□□ 0.43
PDXDC1-212ENST00000565986 EVA1CP58658 441 aa17.73■□□□□ 0.43
PDXDC1-212ENST00000565986 SPATA31A5Q5VU36 1347 aa17.71■□□□□ 0.42
PDXDC1-212ENST00000565986 WASHC2AQ641Q2 1341 aa17.71■□□□□ 0.42
PDXDC1-212ENST00000565986 SPATA31A7Q8IWB4 1347 aa17.71■□□□□ 0.42
PDXDC1-212ENST00000565986 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
PDXDC1-212ENST00000565986 RGPD5Q99666 1765 aa17.69■□□□□ 0.42
PDXDC1-212ENST00000565986 NSD2O96028 1365 aa17.68■□□□□ 0.42
PDXDC1-212ENST00000565986 SOCS7O14512 581 aa17.68■□□□□ 0.42
PDXDC1-212ENST00000565986 LARP1Q6PKG0 1096 aaKnown RBP17.68■□□□□ 0.42
PDXDC1-212ENST00000565986 AXIN2Q9Y2T1 843 aa17.68■□□□□ 0.42
PDXDC1-212ENST00000565986 SPATA31A1Q5TZJ5 1347 aa17.68■□□□□ 0.42
PDXDC1-212ENST00000565986 CRB1P82279 1406 aa17.67■□□□□ 0.42
PDXDC1-212ENST00000565986 A0A0G2JS52 829 aa17.67■□□□□ 0.42
PDXDC1-212ENST00000565986 MYT1Q01538 1121 aa17.67■□□□□ 0.42
PDXDC1-212ENST00000565986 KNSTRNQ9Y448 316 aa17.67■□□□□ 0.42
PDXDC1-212ENST00000565986 MAP3K19Q56UN5 1328 aa17.67■□□□□ 0.42
PDXDC1-212ENST00000565986 BLMP54132 1417 aaPredicted RBP17.66■□□□□ 0.42
PDXDC1-212ENST00000565986 FAM98CQ17RN3 349 aaKnown RBP17.66■□□□□ 0.42
PDXDC1-212ENST00000565986 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
PDXDC1-212ENST00000565986 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
PDXDC1-212ENST00000565986 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
PDXDC1-212ENST00000565986 CSB-PGBD3P0DP91 1061 aa17.65■□□□□ 0.42
PDXDC1-212ENST00000565986 AMPHP49418 695 aa17.64■□□□□ 0.41
PDXDC1-212ENST00000565986 TOM1L2Q6ZVM7 507 aa17.64■□□□□ 0.41
PDXDC1-212ENST00000565986 SEPT12Q8IYM1 358 aa17.64■□□□□ 0.41
PDXDC1-212ENST00000565986 THSD7AQ9UPZ6 1657 aa17.64■□□□□ 0.41
PDXDC1-212ENST00000565986 ONECUT3O60422 494 aaPredicted RBP17.63■□□□□ 0.41
PDXDC1-212ENST00000565986 FBLN1P23142 703 aa17.63■□□□□ 0.41
PDXDC1-212ENST00000565986 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
PDXDC1-212ENST00000565986 TCP11L2Q8N4U5 519 aa17.63■□□□□ 0.41
PDXDC1-212ENST00000565986 IP6K1Q92551 441 aa17.63■□□□□ 0.41
PDXDC1-212ENST00000565986 ERBB3P21860 1342 aa17.63■□□□□ 0.41
PDXDC1-212ENST00000565986 BRWD3Q6RI45 1802 aa17.63■□□□□ 0.41
PDXDC1-212ENST00000565986 FAM208AQ9UK61 1670 aaKnown RBP17.62■□□□□ 0.41
PDXDC1-212ENST00000565986 THRAP3Q9Y2W1 955 aaKnown RBP17.62■□□□□ 0.41
PDXDC1-212ENST00000565986 HOXC9P31274 260 aa17.61■□□□□ 0.41
PDXDC1-212ENST00000565986 BARGINQ6ZT62 677 aa17.61■□□□□ 0.41
PDXDC1-212ENST00000565986 ANKRD24Q8TF21 1146 aa17.61■□□□□ 0.41
PDXDC1-212ENST00000565986 KIF24Q5T7B8 1368 aa17.61■□□□□ 0.41
PDXDC1-212ENST00000565986 EP400Q96L91 3159 aa17.6■□□□□ 0.41
PDXDC1-212ENST00000565986 FLT4P35916 1363 aa17.6■□□□□ 0.41
PDXDC1-212ENST00000565986 PEAK1Q9H792 1746 aa17.6■□□□□ 0.41
PDXDC1-212ENST00000565986 WNK3Q9BYP7 1800 aa17.6■□□□□ 0.41
PDXDC1-212ENST00000565986 SMG6Q86US8 1419 aaKnown RBP17.59■□□□□ 0.41
PDXDC1-212ENST00000565986 TNNT2P45379 298 aaPredicted RBP17.59■□□□□ 0.41
PDXDC1-212ENST00000565986 AMER1Q5JTC6 1135 aaPredicted RBP17.59■□□□□ 0.41
PDXDC1-212ENST00000565986 MORC1Q86VD1 984 aa17.59■□□□□ 0.41
PDXDC1-212ENST00000565986 CARD10Q9BWT7 1032 aa17.59■□□□□ 0.41
PDXDC1-212ENST00000565986 NLRP2Q9NX02 1062 aa17.59■□□□□ 0.41
PDXDC1-212ENST00000565986 LTV1Q96GA3 475 aaPredicted RBP17.58■□□□□ 0.4
PDXDC1-212ENST00000565986 EMILIN1Q9Y6C2 1016 aa17.58■□□□□ 0.4
PDXDC1-212ENST00000565986 MAP2P11137 1827 aaKnown RBP17.58■□□□□ 0.4
PDXDC1-212ENST00000565986 PPM1GO15355 546 aaPredicted RBP17.57■□□□□ 0.4
PDXDC1-212ENST00000565986 PER1O15534 1290 aaPredicted RBP17.57■□□□□ 0.4
PDXDC1-212ENST00000565986 KRT27Q7Z3Y8 459 aa17.57■□□□□ 0.4
PDXDC1-212ENST00000565986 PARP4Q9UKK3 1724 aaKnown RBP17.57■□□□□ 0.4
PDXDC1-212ENST00000565986 INSRP06213 1382 aa17.56■□□□□ 0.4
PDXDC1-212ENST00000565986 NPC1L1Q9UHC9 1359 aa17.55■□□□□ 0.4
PDXDC1-212ENST00000565986 LRRC37A3O60309 1634 aa17.54■□□□□ 0.4
PDXDC1-212ENST00000565986 HSP90AB2PQ58FF8 381 aa17.54■□□□□ 0.4
PDXDC1-212ENST00000565986 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
PDXDC1-212ENST00000565986 CDCA7Q9BWT1 371 aaPredicted RBP17.54■□□□□ 0.4
PDXDC1-212ENST00000565986 POLKQ9UBT6 870 aa17.54■□□□□ 0.4
PDXDC1-212ENST00000565986 DISP2A7MBM2 1401 aa17.53■□□□□ 0.4
PDXDC1-212ENST00000565986 RGPD2P0DJD1 1756 aa17.52■□□□□ 0.4
PDXDC1-212ENST00000565986 PDE3BQ13370 1112 aa17.51■□□□□ 0.39
PDXDC1-212ENST00000565986 CNGB1Q14028 1251 aaPredicted RBP17.51■□□□□ 0.39
PDXDC1-212ENST00000565986 UPF1Q92900 1129 aaKnown RBP eCLIP17.51■□□□□ 0.39
PDXDC1-212ENST00000565986 TNS2Q63HR2 1409 aa17.5■□□□□ 0.39
PDXDC1-212ENST00000565986 DDB1Q16531 1140 aa17.5■□□□□ 0.39
PDXDC1-212ENST00000565986 IL2RBP14784 551 aa17.49■□□□□ 0.39
PDXDC1-212ENST00000565986 FAM182BQ5T319 152 aa17.48■□□□□ 0.39
PDXDC1-212ENST00000565986 NBPF6Q5VWK0 638 aa17.47■□□□□ 0.39
PDXDC1-212ENST00000565986 NBPF4Q96M43 638 aa17.47■□□□□ 0.39
PDXDC1-212ENST00000565986 OVOS2A0A0G2JMS6 1433 aa17.47■□□□□ 0.39
PDXDC1-212ENST00000565986 USHBP1Q8N6Y0 703 aa17.46■□□□□ 0.39
PDXDC1-212ENST00000565986 EXOC5O00471 708 aa17.45■□□□□ 0.38
PDXDC1-212ENST00000565986 EIF4A2Q14240 407 aaKnown RBP17.45■□□□□ 0.38
PDXDC1-212ENST00000565986 FAM196AQ6ZSG2 479 aa17.45■□□□□ 0.38
PDXDC1-212ENST00000565986 MEGF6O75095 1541 aa17.45■□□□□ 0.38
PDXDC1-212ENST00000565986 DDX10Q13206 875 aaKnown RBP17.44■□□□□ 0.38
PDXDC1-212ENST00000565986 CCDC125Q86Z20 511 aa17.44■□□□□ 0.38
PDXDC1-212ENST00000565986 RAPGEF4Q8WZA2 1011 aa17.44■□□□□ 0.38
PDXDC1-212ENST00000565986 NCAPD2Q15021 1401 aa17.44■□□□□ 0.38
PDXDC1-212ENST00000565986 MTHFSP49914 203 aa17.43■□□□□ 0.38
PDXDC1-212ENST00000565986 SF3B2Q13435 895 aaKnown RBP17.43■□□□□ 0.38
PDXDC1-212ENST00000565986 RGPD1P0DJD0 1748 aa17.43■□□□□ 0.38
PDXDC1-212ENST00000565986 EYA1Q99502 592 aa17.42■□□□□ 0.38
PDXDC1-212ENST00000565986 MARCH10Q8NA82 808 aaPredicted RBP17.41■□□□□ 0.38
PDXDC1-212ENST00000565986 TATP17735 454 aaPredicted RBP17.4■□□□□ 0.38
PDXDC1-212ENST00000565986 TNS1Q9HBL0 1735 aaKnown RBP17.4■□□□□ 0.38
PDXDC1-212ENST00000565986 IGSF1Q8N6C5 1336 aa17.39■□□□□ 0.37
PDXDC1-212ENST00000565986 BCL9O00512 1426 aa17.38■□□□□ 0.37
PDXDC1-212ENST00000565986 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
PDXDC1-212ENST00000565986 TRIM37O94972 964 aa17.38■□□□□ 0.37
PDXDC1-212ENST00000565986 SBF2Q86WG5 1849 aa17.37■□□□□ 0.37
PDXDC1-212ENST00000565986 ZCRB1Q8TBF4 217 aaKnown RBP17.37■□□□□ 0.37
PDXDC1-212ENST00000565986 PKD1L3Q7Z443 1732 aa17.37■□□□□ 0.37
PDXDC1-212ENST00000565986 PARD3Q8TEW0 1356 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms