RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 PLCH1Q4KWH8 1693 aa18.92■□□□□ 0.62
CCNDBP1-206ENST00000565296 ZNF772Q68DY9 489 aaPredicted RBP18.9■□□□□ 0.62
CCNDBP1-206ENST00000565296 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
CCNDBP1-206ENST00000565296 POLKQ9UBT6 870 aa18.9■□□□□ 0.62
CCNDBP1-206ENST00000565296 EMILIN1Q9Y6C2 1016 aa18.9■□□□□ 0.62
CCNDBP1-206ENST00000565296 IP6K1Q92551 441 aa18.89■□□□□ 0.61
CCNDBP1-206ENST00000565296 COL5A2P05997 1499 aaPredicted RBP18.89■□□□□ 0.61
CCNDBP1-206ENST00000565296 HOXC9P31274 260 aa18.88■□□□□ 0.61
CCNDBP1-206ENST00000565296 NWD2Q9ULI1 1742 aa18.88■□□□□ 0.61
CCNDBP1-206ENST00000565296 NRAPQ86VF7 1730 aa18.88■□□□□ 0.61
CCNDBP1-206ENST00000565296 ABCC6O95255 1503 aa18.88■□□□□ 0.61
CCNDBP1-206ENST00000565296 ATRNO75882 1429 aa18.88■□□□□ 0.61
CCNDBP1-206ENST00000565296 QTRT2Q9H974 415 aaKnown RBP18.88■□□□□ 0.61
CCNDBP1-206ENST00000565296 LTN1O94822 1766 aa18.87■□□□□ 0.61
CCNDBP1-206ENST00000565296 AMPHP49418 695 aa18.87■□□□□ 0.61
CCNDBP1-206ENST00000565296 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
CCNDBP1-206ENST00000565296 PEAK1Q9H792 1746 aa18.87■□□□□ 0.61
CCNDBP1-206ENST00000565296 VPS72Q15906 364 aa18.86■□□□□ 0.61
CCNDBP1-206ENST00000565296 LARP1Q6PKG0 1096 aaKnown RBP18.86■□□□□ 0.61
CCNDBP1-206ENST00000565296 TRPC5Q9UL62 973 aaPredicted RBP18.86■□□□□ 0.61
CCNDBP1-206ENST00000565296 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
CCNDBP1-206ENST00000565296 HSP90AB2PQ58FF8 381 aa18.86■□□□□ 0.61
CCNDBP1-206ENST00000565296 SMG6Q86US8 1419 aaKnown RBP18.85■□□□□ 0.61
CCNDBP1-206ENST00000565296 KIF24Q5T7B8 1368 aa18.85■□□□□ 0.61
CCNDBP1-206ENST00000565296 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.85■□□□□ 0.61
CCNDBP1-206ENST00000565296 BLMP54132 1417 aaPredicted RBP18.85■□□□□ 0.61
CCNDBP1-206ENST00000565296 FLT4P35916 1363 aa18.85■□□□□ 0.61
CCNDBP1-206ENST00000565296 ERBB3P21860 1342 aa18.84■□□□□ 0.61
CCNDBP1-206ENST00000565296 PPM1GO15355 546 aaPredicted RBP18.84■□□□□ 0.61
CCNDBP1-206ENST00000565296 EVA1CP58658 441 aa18.84■□□□□ 0.61
CCNDBP1-206ENST00000565296 PARD3Q8TEW0 1356 aa18.84■□□□□ 0.61
CCNDBP1-206ENST00000565296 MIER1Q8N108 512 aa18.84■□□□□ 0.61
CCNDBP1-206ENST00000565296 WDR17Q8IZU2 1322 aa18.83■□□□□ 0.6
CCNDBP1-206ENST00000565296 ANKRD24Q8TF21 1146 aa18.83■□□□□ 0.6
CCNDBP1-206ENST00000565296 GJD4Q96KN9 370 aaPredicted RBP18.83■□□□□ 0.6
CCNDBP1-206ENST00000565296 INSRP06213 1382 aa18.83■□□□□ 0.6
CCNDBP1-206ENST00000565296 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
CCNDBP1-206ENST00000565296 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
CCNDBP1-206ENST00000565296 MTHFSP49914 203 aa18.81■□□□□ 0.6
CCNDBP1-206ENST00000565296 GTF3C3Q9Y5Q9 886 aa18.81■□□□□ 0.6
CCNDBP1-206ENST00000565296 RGPD5Q99666 1765 aa18.81■□□□□ 0.6
CCNDBP1-206ENST00000565296 LTV1Q96GA3 475 aaPredicted RBP18.81■□□□□ 0.6
CCNDBP1-206ENST00000565296 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
CCNDBP1-206ENST00000565296 PPP2R1AP30153 589 aa18.8■□□□□ 0.6
CCNDBP1-206ENST00000565296 CCDC9Q9Y3X0 531 aaKnown RBP18.8■□□□□ 0.6
CCNDBP1-206ENST00000565296 GLI3P10071 1580 aa18.8■□□□□ 0.6
CCNDBP1-206ENST00000565296 CRB1P82279 1406 aa18.8■□□□□ 0.6
CCNDBP1-206ENST00000565296 MAP2P11137 1827 aaKnown RBP18.8■□□□□ 0.6
CCNDBP1-206ENST00000565296 RBM6P78332 1123 aaKnown RBP18.79■□□□□ 0.6
CCNDBP1-206ENST00000565296 CSB-PGBD3P0DP91 1061 aa18.79■□□□□ 0.6
CCNDBP1-206ENST00000565296 RXRBP28702 533 aa18.79■□□□□ 0.6
CCNDBP1-206ENST00000565296 TOM1L2Q6ZVM7 507 aa18.79■□□□□ 0.6
CCNDBP1-206ENST00000565296 USP35Q9P2H5 1018 aa18.79■□□□□ 0.6
CCNDBP1-206ENST00000565296 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
CCNDBP1-206ENST00000565296 RALBP1Q15311 655 aa18.77■□□□□ 0.6
CCNDBP1-206ENST00000565296 CARD10Q9BWT7 1032 aa18.77■□□□□ 0.6
CCNDBP1-206ENST00000565296 EIF4A2Q14240 407 aaKnown RBP18.77■□□□□ 0.59
CCNDBP1-206ENST00000565296 PRKRIP1Q9H875 184 aaPredicted RBP18.77■□□□□ 0.59
CCNDBP1-206ENST00000565296 NLRP2Q9NX02 1062 aa18.76■□□□□ 0.59
CCNDBP1-206ENST00000565296 ONECUT3O60422 494 aaPredicted RBP18.75■□□□□ 0.59
CCNDBP1-206ENST00000565296 NBPF6Q5VWK0 638 aa18.75■□□□□ 0.59
CCNDBP1-206ENST00000565296 NBPF4Q96M43 638 aa18.75■□□□□ 0.59
CCNDBP1-206ENST00000565296 FAM98CQ17RN3 349 aaKnown RBP18.74■□□□□ 0.59
CCNDBP1-206ENST00000565296 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
CCNDBP1-206ENST00000565296 BARGINQ6ZT62 677 aa18.73■□□□□ 0.59
CCNDBP1-206ENST00000565296 COL3A1P02461 1466 aaPredicted RBP18.73■□□□□ 0.59
CCNDBP1-206ENST00000565296 IL13P35225 146 aa18.72■□□□□ 0.59
CCNDBP1-206ENST00000565296 THRAP3Q9Y2W1 955 aaKnown RBP18.72■□□□□ 0.59
CCNDBP1-206ENST00000565296 RGS12O14924 1447 aa18.72■□□□□ 0.59
CCNDBP1-206ENST00000565296 USHBP1Q8N6Y0 703 aa18.72■□□□□ 0.59
CCNDBP1-206ENST00000565296 EYA1Q99502 592 aa18.72■□□□□ 0.59
CCNDBP1-206ENST00000565296 ILDR2Q71H61 639 aa18.71■□□□□ 0.59
CCNDBP1-206ENST00000565296 MYBBP1AQ9BQG0 1328 aaKnown RBP18.7■□□□□ 0.58
CCNDBP1-206ENST00000565296 DISP2A7MBM2 1401 aa18.7■□□□□ 0.58
CCNDBP1-206ENST00000565296 SEPT12Q8IYM1 358 aa18.7■□□□□ 0.58
CCNDBP1-206ENST00000565296 NCAPD2Q15021 1401 aa18.69■□□□□ 0.58
CCNDBP1-206ENST00000565296 FAM208AQ9UK61 1670 aaKnown RBP18.68■□□□□ 0.58
CCNDBP1-206ENST00000565296 DIAPH1O60610 1272 aaKnown RBP18.68■□□□□ 0.58
CCNDBP1-206ENST00000565296 RGPD2P0DJD1 1756 aa18.68■□□□□ 0.58
CCNDBP1-206ENST00000565296 THSD7AQ9UPZ6 1657 aa18.68■□□□□ 0.58
CCNDBP1-206ENST00000565296 IGSF1Q8N6C5 1336 aa18.68■□□□□ 0.58
CCNDBP1-206ENST00000565296 YTHDC1Q96MU7 727 aaKnown RBP18.67■□□□□ 0.58
CCNDBP1-206ENST00000565296 EP400Q96L91 3159 aa18.66■□□□□ 0.58
CCNDBP1-206ENST00000565296 ANP32CO43423 234 aa18.65■□□□□ 0.58
CCNDBP1-206ENST00000565296 IL2RBP14784 551 aa18.65■□□□□ 0.58
CCNDBP1-206ENST00000565296 CFAP53Q96M91 514 aa18.65■□□□□ 0.58
CCNDBP1-206ENST00000565296 MEGF6O75095 1541 aa18.65■□□□□ 0.58
CCNDBP1-206ENST00000565296 AEBP1Q8IUX7 1158 aa18.65■□□□□ 0.58
CCNDBP1-206ENST00000565296 RGPD1P0DJD0 1748 aa18.64■□□□□ 0.57
CCNDBP1-206ENST00000565296 A0A0G2JS52 829 aa18.64■□□□□ 0.57
CCNDBP1-206ENST00000565296 CDCA7Q9BWT1 371 aaPredicted RBP18.64■□□□□ 0.57
CCNDBP1-206ENST00000565296 KDRP35968 1356 aa18.62■□□□□ 0.57
CCNDBP1-206ENST00000565296 SULT6B1Q6IMI4 303 aa18.62■□□□□ 0.57
CCNDBP1-206ENST00000565296 OVOS2A0A0G2JMS6 1433 aa18.61■□□□□ 0.57
CCNDBP1-206ENST00000565296 WNK3Q9BYP7 1800 aa18.61■□□□□ 0.57
CCNDBP1-206ENST00000565296 U2SURPO15042 1029 aaKnown RBP18.6■□□□□ 0.57
CCNDBP1-206ENST00000565296 DDB1Q16531 1140 aa18.6■□□□□ 0.57
CCNDBP1-206ENST00000565296 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
CCNDBP1-206ENST00000565296 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
CCNDBP1-206ENST00000565296 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms