RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 PDE3BQ13370 1112 aa22.18■■□□□ 1.14
THUMPD1-203ENST00000565248 AMER1Q5JTC6 1135 aaPredicted RBP22.18■■□□□ 1.14
THUMPD1-203ENST00000565248 NBPF14Q5TI25 921 aa22.18■■□□□ 1.14
THUMPD1-203ENST00000565248 ZNF692Q9BU19 519 aaPredicted RBP22.18■■□□□ 1.14
THUMPD1-203ENST00000565248 STRN4Q9NRL3 753 aa22.18■■□□□ 1.14
THUMPD1-203ENST00000565248 TOPAZ1Q8N9V7 1692 aa22.17■■□□□ 1.14
THUMPD1-203ENST00000565248 NSD2O96028 1365 aa22.17■■□□□ 1.14
THUMPD1-203ENST00000565248 CD163L1Q9NR16 1453 aa22.16■■□□□ 1.14
THUMPD1-203ENST00000565248 KIAA0232Q92628 1395 aa22.16■■□□□ 1.14
THUMPD1-203ENST00000565248 YY1P25490 414 aa22.16■■□□□ 1.14
THUMPD1-203ENST00000565248 EVA1CP58658 441 aa22.16■■□□□ 1.14
THUMPD1-203ENST00000565248 MYBBP1AQ9BQG0 1328 aaKnown RBP22.15■■□□□ 1.14
THUMPD1-203ENST00000565248 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
THUMPD1-203ENST00000565248 CHRNA2Q15822 529 aa22.15■■□□□ 1.14
THUMPD1-203ENST00000565248 CPSF1Q10570 1443 aaKnown RBP22.14■■□□□ 1.14
THUMPD1-203ENST00000565248 EDC4Q6P2E9 1401 aaKnown RBP22.14■■□□□ 1.13
THUMPD1-203ENST00000565248 ZC3H6P61129 1189 aaKnown RBP22.13■■□□□ 1.13
THUMPD1-203ENST00000565248 USP35Q9P2H5 1018 aa22.13■■□□□ 1.13
THUMPD1-203ENST00000565248 ACEP12821 1306 aa22.11■■□□□ 1.13
THUMPD1-203ENST00000565248 BARGINQ6ZT62 677 aa22.11■■□□□ 1.13
THUMPD1-203ENST00000565248 PPP1R1BQ9UD71 204 aaPredicted RBP22.11■■□□□ 1.13
THUMPD1-203ENST00000565248 RREB1Q92766 1687 aa22.11■■□□□ 1.13
THUMPD1-203ENST00000565248 PHRF1Q9P1Y6 1649 aaKnown RBP22.1■■□□□ 1.13
THUMPD1-203ENST00000565248 MORC1Q86VD1 984 aa22.09■■□□□ 1.13
THUMPD1-203ENST00000565248 NLRP13Q86W25 1043 aa22.09■■□□□ 1.13
THUMPD1-203ENST00000565248 SPON1Q9HCB6 807 aa22.09■■□□□ 1.13
THUMPD1-203ENST00000565248 POLR3AO14802 1390 aaPredicted RBP22.09■■□□□ 1.13
THUMPD1-203ENST00000565248 AKAP12Q02952 1782 aa22.08■■□□□ 1.13
THUMPD1-203ENST00000565248 SSH2Q76I76 1423 aa22.07■■□□□ 1.12
THUMPD1-203ENST00000565248 NUP188Q5SRE5 1749 aa22.07■■□□□ 1.12
THUMPD1-203ENST00000565248 MON2Q7Z3U7 1717 aa22.07■■□□□ 1.12
THUMPD1-203ENST00000565248 NUTM2GQ5VZR2 741 aa22.07■■□□□ 1.12
THUMPD1-203ENST00000565248 TCP11L2Q8N4U5 519 aa22.07■■□□□ 1.12
THUMPD1-203ENST00000565248 MRS2Q9HD23 443 aa22.07■■□□□ 1.12
THUMPD1-203ENST00000565248 BRD4O60885 1362 aaPredicted RBP22.07■■□□□ 1.12
THUMPD1-203ENST00000565248 USP6P35125 1406 aa22.06■■□□□ 1.12
THUMPD1-203ENST00000565248 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.05■■□□□ 1.12
THUMPD1-203ENST00000565248 THRAP3Q9Y2W1 955 aaKnown RBP22.05■■□□□ 1.12
THUMPD1-203ENST00000565248 FYB1O15117 783 aa22.03■■□□□ 1.12
THUMPD1-203ENST00000565248 KCNQ2O43526 872 aa22.03■■□□□ 1.12
THUMPD1-203ENST00000565248 LARP1Q6PKG0 1096 aaKnown RBP22.03■■□□□ 1.12
THUMPD1-203ENST00000565248 ABTB2Q8N961 1025 aa22.03■■□□□ 1.12
THUMPD1-203ENST00000565248 TTC21AQ8NDW8 1320 aa22.03■■□□□ 1.12
THUMPD1-203ENST00000565248 KIF20BQ96Q89 1820 aa22.02■■□□□ 1.12
THUMPD1-203ENST00000565248 PPP2R1AP30153 589 aa22.02■■□□□ 1.12
THUMPD1-203ENST00000565248 GGNBP2Q9H3C7 697 aa22.02■■□□□ 1.12
THUMPD1-203ENST00000565248 TTC21BQ7Z4L5 1316 aa22.02■■□□□ 1.12
THUMPD1-203ENST00000565248 CAMTA1Q9Y6Y1 1673 aa22■■□□□ 1.11
THUMPD1-203ENST00000565248 ANKRD26Q9UPS8 1709 aa22■■□□□ 1.11
THUMPD1-203ENST00000565248 CPDO75976 1380 aa21.99■■□□□ 1.11
THUMPD1-203ENST00000565248 COG3Q96JB2 828 aa21.99■■□□□ 1.11
THUMPD1-203ENST00000565248 NRKQ7Z2Y5 1582 aa21.99■■□□□ 1.11
THUMPD1-203ENST00000565248 NME9Q86XW9 330 aa21.97■■□□□ 1.11
THUMPD1-203ENST00000565248 PARP4Q9UKK3 1724 aaKnown RBP21.97■■□□□ 1.11
THUMPD1-203ENST00000565248 LMO7Q8WWI1 1683 aa21.96■■□□□ 1.11
THUMPD1-203ENST00000565248 TNNT2P45379 298 aaPredicted RBP21.95■■□□□ 1.1
THUMPD1-203ENST00000565248 PLSCR1O15162 318 aa21.94■■□□□ 1.1
THUMPD1-203ENST00000565248 GCP02774 474 aa21.94■■□□□ 1.1
THUMPD1-203ENST00000565248 CCDC184Q52MB2 194 aa21.94■■□□□ 1.1
THUMPD1-203ENST00000565248 USP19O94966 1318 aa21.94■■□□□ 1.1
THUMPD1-203ENST00000565248 OVOS2A0A0G2JMS6 1433 aa21.94■■□□□ 1.1
THUMPD1-203ENST00000565248 OVOS2A0A0J9YW53 1432 aa21.94■■□□□ 1.1
THUMPD1-203ENST00000565248 OVOS2Q6IE36 1432 aa21.94■■□□□ 1.1
THUMPD1-203ENST00000565248 RGPD3A6NKT7 1758 aaPredicted RBP21.93■■□□□ 1.1
THUMPD1-203ENST00000565248 RGPD4Q7Z3J3 1758 aa21.93■■□□□ 1.1
THUMPD1-203ENST00000565248 CFAP53Q96M91 514 aa21.93■■□□□ 1.1
THUMPD1-203ENST00000565248 COL5A2P05997 1499 aaPredicted RBP21.92■■□□□ 1.1
THUMPD1-203ENST00000565248 CRB1P82279 1406 aa21.92■■□□□ 1.1
THUMPD1-203ENST00000565248 MSH5O43196 834 aa21.91■■□□□ 1.1
THUMPD1-203ENST00000565248 YTHDC1Q96MU7 727 aaKnown RBP21.91■■□□□ 1.1
THUMPD1-203ENST00000565248 USP31Q70CQ4 1352 aa21.9■■□□□ 1.1
THUMPD1-203ENST00000565248 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
THUMPD1-203ENST00000565248 DDB1Q16531 1140 aa21.9■■□□□ 1.1
THUMPD1-203ENST00000565248 FAM9BQ8IZU0 186 aa21.9■■□□□ 1.1
THUMPD1-203ENST00000565248 SBF2Q86WG5 1849 aa21.89■■□□□ 1.09
THUMPD1-203ENST00000565248 PNISRQ8TF01 805 aaKnown RBP21.88■■□□□ 1.09
THUMPD1-203ENST00000565248 BCL11BQ9C0K0 894 aaPredicted RBP21.88■■□□□ 1.09
THUMPD1-203ENST00000565248 AATKQ6ZMQ8 1374 aa21.87■■□□□ 1.09
THUMPD1-203ENST00000565248 MTHFSP49914 203 aa21.87■■□□□ 1.09
THUMPD1-203ENST00000565248 NLRP6P59044 892 aa21.87■■□□□ 1.09
THUMPD1-203ENST00000565248 PEAK1Q9H792 1746 aa21.86■■□□□ 1.09
THUMPD1-203ENST00000565248 WDR43Q15061 677 aaKnown RBP eCLIP21.86■■□□□ 1.09
THUMPD1-203ENST00000565248 TOM1L2Q6ZVM7 507 aa21.86■■□□□ 1.09
THUMPD1-203ENST00000565248 CDCA7Q9BWT1 371 aaPredicted RBP21.84■■□□□ 1.09
THUMPD1-203ENST00000565248 PIK3C2AO00443 1686 aa21.84■■□□□ 1.09
THUMPD1-203ENST00000565248 CASZ1Q86V15 1759 aa21.84■■□□□ 1.09
THUMPD1-203ENST00000565248 LRRC37A3O60309 1634 aa21.84■■□□□ 1.09
THUMPD1-203ENST00000565248 ANO8Q9HCE9 1232 aaPredicted RBP21.83■■□□□ 1.09
THUMPD1-203ENST00000565248 ZBTB7AO95365 584 aa21.82■■□□□ 1.08
THUMPD1-203ENST00000565248 USP54Q70EL1 1684 aa21.82■■□□□ 1.08
THUMPD1-203ENST00000565248 STK32BQ9NY57 414 aa21.81■■□□□ 1.08
THUMPD1-203ENST00000565248 INSRP06213 1382 aa21.8■■□□□ 1.08
THUMPD1-203ENST00000565248 POLKQ9UBT6 870 aa21.8■■□□□ 1.08
THUMPD1-203ENST00000565248 SMG6Q86US8 1419 aaKnown RBP21.8■■□□□ 1.08
THUMPD1-203ENST00000565248 NUDCQ9Y266 331 aa21.79■■□□□ 1.08
THUMPD1-203ENST00000565248 WDR17Q8IZU2 1322 aa21.79■■□□□ 1.08
THUMPD1-203ENST00000565248 PPM1GO15355 546 aaPredicted RBP21.78■■□□□ 1.08
THUMPD1-203ENST00000565248 ZNF784Q8NCA9 323 aaPredicted RBP21.78■■□□□ 1.08
THUMPD1-203ENST00000565248 KCNH5Q8NCM2 988 aa21.78■■□□□ 1.08
THUMPD1-203ENST00000565248 ATF5Q9Y2D1 282 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms