RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 KIF24Q5T7B8 1368 aa22.23■■□□□ 1.15
USB1-206ENST00000562534 RXRBP28702 533 aa22.22■■□□□ 1.15
USB1-206ENST00000562534 GJD4Q96KN9 370 aaPredicted RBP22.22■■□□□ 1.15
USB1-206ENST00000562534 POLKQ9UBT6 870 aa22.22■■□□□ 1.15
USB1-206ENST00000562534 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
USB1-206ENST00000562534 CAMTA1Q9Y6Y1 1673 aa22.21■■□□□ 1.15
USB1-206ENST00000562534 HOXC9P31274 260 aa22.21■■□□□ 1.15
USB1-206ENST00000562534 RBM6P78332 1123 aaKnown RBP22.21■■□□□ 1.15
USB1-206ENST00000562534 CNGB1Q14028 1251 aaPredicted RBP22.21■■□□□ 1.15
USB1-206ENST00000562534 NWD2Q9ULI1 1742 aa22.2■■□□□ 1.14
USB1-206ENST00000562534 PPM1GO15355 546 aaPredicted RBP22.2■■□□□ 1.14
USB1-206ENST00000562534 EMILIN1Q9Y6C2 1016 aa22.19■■□□□ 1.14
USB1-206ENST00000562534 ABCC6O95255 1503 aa22.18■■□□□ 1.14
USB1-206ENST00000562534 ATRNO75882 1429 aa22.18■■□□□ 1.14
USB1-206ENST00000562534 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
USB1-206ENST00000562534 RTL1A6NKG5 1358 aa22.18■■□□□ 1.14
USB1-206ENST00000562534 CSB-PGBD3P0DP91 1061 aa22.18■■□□□ 1.14
USB1-206ENST00000562534 LARP1Q6PKG0 1096 aaKnown RBP22.18■■□□□ 1.14
USB1-206ENST00000562534 ANKRD26Q9UPS8 1709 aa22.17■■□□□ 1.14
USB1-206ENST00000562534 ANKRD24Q8TF21 1146 aa22.17■■□□□ 1.14
USB1-206ENST00000562534 COL18A1P39060 1754 aa22.17■■□□□ 1.14
USB1-206ENST00000562534 PLCH1Q4KWH8 1693 aa22.17■■□□□ 1.14
USB1-206ENST00000562534 LMO7Q8WWI1 1683 aa22.17■■□□□ 1.14
USB1-206ENST00000562534 FLT4P35916 1363 aa22.16■■□□□ 1.14
USB1-206ENST00000562534 SPATA31A5Q5VU36 1347 aa22.16■■□□□ 1.14
USB1-206ENST00000562534 SPATA31A7Q8IWB4 1347 aa22.16■■□□□ 1.14
USB1-206ENST00000562534 WDR17Q8IZU2 1322 aa22.16■■□□□ 1.14
USB1-206ENST00000562534 HSP90AB2PQ58FF8 381 aa22.16■■□□□ 1.14
USB1-206ENST00000562534 TOM1L2Q6ZVM7 507 aa22.16■■□□□ 1.14
USB1-206ENST00000562534 COL5A2P05997 1499 aaPredicted RBP22.15■■□□□ 1.14
USB1-206ENST00000562534 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.14■■□□□ 1.14
USB1-206ENST00000562534 INSRP06213 1382 aa22.14■■□□□ 1.14
USB1-206ENST00000562534 ERBB3P21860 1342 aa22.14■■□□□ 1.14
USB1-206ENST00000562534 THRAP3Q9Y2W1 955 aaKnown RBP22.14■■□□□ 1.13
USB1-206ENST00000562534 LTN1O94822 1766 aa22.14■■□□□ 1.13
USB1-206ENST00000562534 SPATA31A1Q5TZJ5 1347 aa22.13■■□□□ 1.13
USB1-206ENST00000562534 MTHFSP49914 203 aa22.13■■□□□ 1.13
USB1-206ENST00000562534 RALBP1Q15311 655 aa22.13■■□□□ 1.13
USB1-206ENST00000562534 LTV1Q96GA3 475 aaPredicted RBP22.13■■□□□ 1.13
USB1-206ENST00000562534 CARD10Q9BWT7 1032 aa22.13■■□□□ 1.13
USB1-206ENST00000562534 MAP2P11137 1827 aaKnown RBP22.13■■□□□ 1.13
USB1-206ENST00000562534 ONECUT3O60422 494 aaPredicted RBP22.12■■□□□ 1.13
USB1-206ENST00000562534 TCP11L2Q8N4U5 519 aa22.12■■□□□ 1.13
USB1-206ENST00000562534 NLRP2Q9NX02 1062 aa22.12■■□□□ 1.13
USB1-206ENST00000562534 USP35Q9P2H5 1018 aa22.12■■□□□ 1.13
USB1-206ENST00000562534 CRB1P82279 1406 aa22.12■■□□□ 1.13
USB1-206ENST00000562534 BARGINQ6ZT62 677 aa22.1■■□□□ 1.13
USB1-206ENST00000562534 NRAPQ86VF7 1730 aa22.1■■□□□ 1.13
USB1-206ENST00000562534 PPP2R1AP30153 589 aa22.09■■□□□ 1.13
USB1-206ENST00000562534 SMG6Q86US8 1419 aaKnown RBP22.08■■□□□ 1.13
USB1-206ENST00000562534 RGPD5Q99666 1765 aa22.08■■□□□ 1.13
USB1-206ENST00000562534 FAM98CQ17RN3 349 aaKnown RBP22.07■■□□□ 1.12
USB1-206ENST00000562534 PARD3Q8TEW0 1356 aa22.07■■□□□ 1.12
USB1-206ENST00000562534 CDCA7Q9BWT1 371 aaPredicted RBP22.06■■□□□ 1.12
USB1-206ENST00000562534 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
USB1-206ENST00000562534 NBPF6Q5VWK0 638 aa22.05■■□□□ 1.12
USB1-206ENST00000562534 NBPF4Q96M43 638 aa22.05■■□□□ 1.12
USB1-206ENST00000562534 CFAP53Q96M91 514 aa22.05■■□□□ 1.12
USB1-206ENST00000562534 CDK12Q9NYV4 1490 aaPredicted RBP22.04■■□□□ 1.12
USB1-206ENST00000562534 SEPT12Q8IYM1 358 aa22.04■■□□□ 1.12
USB1-206ENST00000562534 PRKRIP1Q9H875 184 aaPredicted RBP22.04■■□□□ 1.12
USB1-206ENST00000562534 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
USB1-206ENST00000562534 A0A0G2JS52 829 aa22.03■■□□□ 1.12
USB1-206ENST00000562534 MYT1Q01538 1121 aa22.03■■□□□ 1.12
USB1-206ENST00000562534 DIAPH1O60610 1272 aaKnown RBP22.02■■□□□ 1.12
USB1-206ENST00000562534 GLI3P10071 1580 aa22.02■■□□□ 1.12
USB1-206ENST00000562534 EYA1Q99502 592 aa22.01■■□□□ 1.11
USB1-206ENST00000562534 ANP32CO43423 234 aa22■■□□□ 1.11
USB1-206ENST00000562534 IL2RBP14784 551 aa22■■□□□ 1.11
USB1-206ENST00000562534 IL13P35225 146 aa22■■□□□ 1.11
USB1-206ENST00000562534 ILDR2Q71H61 639 aa21.99■■□□□ 1.11
USB1-206ENST00000562534 MYBBP1AQ9BQG0 1328 aaKnown RBP21.99■■□□□ 1.11
USB1-206ENST00000562534 EXOC5O00471 708 aa21.98■■□□□ 1.11
USB1-206ENST00000562534 RAPGEF4Q8WZA2 1011 aa21.97■■□□□ 1.11
USB1-206ENST00000562534 NUDCQ9Y266 331 aa21.97■■□□□ 1.11
USB1-206ENST00000562534 FAM208AQ9UK61 1670 aaKnown RBP21.96■■□□□ 1.11
USB1-206ENST00000562534 PDE3BQ13370 1112 aa21.96■■□□□ 1.11
USB1-206ENST00000562534 DDB1Q16531 1140 aa21.96■■□□□ 1.11
USB1-206ENST00000562534 KRT27Q7Z3Y8 459 aa21.95■■□□□ 1.1
USB1-206ENST00000562534 USHBP1Q8N6Y0 703 aa21.95■■□□□ 1.1
USB1-206ENST00000562534 RGS12O14924 1447 aa21.95■■□□□ 1.1
USB1-206ENST00000562534 TATP17735 454 aaPredicted RBP21.94■■□□□ 1.1
USB1-206ENST00000562534 IGSF1Q8N6C5 1336 aa21.94■■□□□ 1.1
USB1-206ENST00000562534 DISP2A7MBM2 1401 aa21.91■■□□□ 1.1
USB1-206ENST00000562534 U2SURPO15042 1029 aaKnown RBP21.91■■□□□ 1.1
USB1-206ENST00000562534 SULT6B1Q6IMI4 303 aa21.91■■□□□ 1.1
USB1-206ENST00000562534 ZCRB1Q8TBF4 217 aaKnown RBP21.9■■□□□ 1.1
USB1-206ENST00000562534 NCAPD2Q15021 1401 aa21.89■■□□□ 1.1
USB1-206ENST00000562534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.09
USB1-206ENST00000562534 RGPD2P0DJD1 1756 aa21.88■■□□□ 1.09
USB1-206ENST00000562534 THSD7AQ9UPZ6 1657 aa21.88■■□□□ 1.09
USB1-206ENST00000562534 SPG7Q9UQ90 795 aa21.87■■□□□ 1.09
USB1-206ENST00000562534 COL3A1P02461 1466 aaPredicted RBP21.87■■□□□ 1.09
USB1-206ENST00000562534 U2AF1L5P0DN76 240 aaPredicted RBP21.86■■□□□ 1.09
USB1-206ENST00000562534 U2AF1Q01081 240 aaKnown RBP eCLIP21.86■■□□□ 1.09
USB1-206ENST00000562534 FAM196AQ6ZSG2 479 aa21.86■■□□□ 1.09
USB1-206ENST00000562534 KDRP35968 1356 aa21.86■■□□□ 1.09
USB1-206ENST00000562534 HMOX1P09601 288 aa21.85■■□□□ 1.09
USB1-206ENST00000562534 AMOTQ4VCS5 1084 aa21.85■■□□□ 1.09
USB1-206ENST00000562534 PLEKHO1Q53GL0 409 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms