RNA–Protein interactions for RNA: ENST00000560595.5

ETFA-215, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 1 (best)

Gene ETFA, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-215ENST00000560595 COL5A2P05997 1499 aaPredicted RBP28.21■■■□□ 2.11
ETFA-215ENST00000560595 CGNL1Q0VF96 1302 aa28.19■■■□□ 2.1
ETFA-215ENST00000560595 STRN4Q9NRL3 753 aa28.19■■■□□ 2.1
ETFA-215ENST00000560595 CCDC9Q9Y3X0 531 aaKnown RBP28.19■■■□□ 2.1
ETFA-215ENST00000560595 AXIN2Q9Y2T1 843 aa28.16■■■□□ 2.1
ETFA-215ENST00000560595 SPATA31A5Q5VU36 1347 aa28.15■■■□□ 2.1
ETFA-215ENST00000560595 SPATA31A7Q8IWB4 1347 aa28.15■■■□□ 2.1
ETFA-215ENST00000560595 FBLN1P23142 703 aa28.14■■■□□ 2.1
ETFA-215ENST00000560595 EVA1CP58658 441 aa28.14■■■□□ 2.1
ETFA-215ENST00000560595 BRWD3Q6RI45 1802 aa28.13■■■□□ 2.09
ETFA-215ENST00000560595 LARP1Q6PKG0 1096 aaKnown RBP28.12■■■□□ 2.09
ETFA-215ENST00000560595 MAP2P11137 1827 aaKnown RBP28.11■■■□□ 2.09
ETFA-215ENST00000560595 MAP3K19Q56UN5 1328 aa28.11■■■□□ 2.09
ETFA-215ENST00000560595 SPATA31A1Q5TZJ5 1347 aa28.1■■■□□ 2.09
ETFA-215ENST00000560595 PEAK1Q9H792 1746 aa28.09■■■□□ 2.09
ETFA-215ENST00000560595 KNSTRNQ9Y448 316 aa28.09■■■□□ 2.09
ETFA-215ENST00000560595 NSD2O96028 1365 aa28.09■■■□□ 2.09
ETFA-215ENST00000560595 THSD7AQ9UPZ6 1657 aa28.08■■■□□ 2.09
ETFA-215ENST00000560595 RRS1Q15050 365 aaKnown RBP28.08■■■□□ 2.09
ETFA-215ENST00000560595 WNK3Q9BYP7 1800 aa28.08■■■□□ 2.09
ETFA-215ENST00000560595 CRB1P82279 1406 aa28.08■■■□□ 2.09
ETFA-215ENST00000560595 FAM98CQ17RN3 349 aaKnown RBP28.06■■■□□ 2.08
ETFA-215ENST00000560595 WDR17Q8IZU2 1322 aa28.06■■■□□ 2.08
ETFA-215ENST00000560595 BLMP54132 1417 aaPredicted RBP28.06■■■□□ 2.08
ETFA-215ENST00000560595 PER1O15534 1290 aaPredicted RBP28.05■■■□□ 2.08
ETFA-215ENST00000560595 IP6K1Q92551 441 aa28.05■■■□□ 2.08
ETFA-215ENST00000560595 FAM208AQ9UK61 1670 aaKnown RBP28.04■■■□□ 2.08
ETFA-215ENST00000560595 RTL1A6NKG5 1358 aa28.04■■■□□ 2.08
ETFA-215ENST00000560595 SOCS7O14512 581 aa28.04■■■□□ 2.08
ETFA-215ENST00000560595 ONECUT3O60422 494 aaPredicted RBP28.04■■■□□ 2.08
ETFA-215ENST00000560595 AMER1Q5JTC6 1135 aaPredicted RBP28.04■■■□□ 2.08
ETFA-215ENST00000560595 USP35Q9P2H5 1018 aa28.04■■■□□ 2.08
ETFA-215ENST00000560595 ERBB3P21860 1342 aa28.03■■■□□ 2.08
ETFA-215ENST00000560595 AMPHP49418 695 aa28.03■■■□□ 2.08
ETFA-215ENST00000560595 RGPD2P0DJD1 1756 aa28.02■■■□□ 2.08
ETFA-215ENST00000560595 HOXC9P31274 260 aa28.02■■■□□ 2.08
ETFA-215ENST00000560595 TOM1L2Q6ZVM7 507 aa28.02■■■□□ 2.08
ETFA-215ENST00000560595 SEPT12Q8IYM1 358 aa28.02■■■□□ 2.08
ETFA-215ENST00000560595 CSB-PGBD3P0DP91 1061 aa28.01■■■□□ 2.07
ETFA-215ENST00000560595 TCP11L2Q8N4U5 519 aa28■■■□□ 2.07
ETFA-215ENST00000560595 ANKRD24Q8TF21 1146 aa28■■■□□ 2.07
ETFA-215ENST00000560595 TNNT2P45379 298 aaPredicted RBP27.99■■■□□ 2.07
ETFA-215ENST00000560595 EMILIN1Q9Y6C2 1016 aa27.99■■■□□ 2.07
ETFA-215ENST00000560595 PARP4Q9UKK3 1724 aaKnown RBP27.98■■■□□ 2.07
ETFA-215ENST00000560595 A0A0G2JS52 829 aa27.98■■■□□ 2.07
ETFA-215ENST00000560595 MYT1Q01538 1121 aa27.98■■■□□ 2.07
ETFA-215ENST00000560595 FLT4P35916 1363 aa27.98■■■□□ 2.07
ETFA-215ENST00000560595 KIF24Q5T7B8 1368 aa27.98■■■□□ 2.07
ETFA-215ENST00000560595 BARGINQ6ZT62 677 aa27.97■■■□□ 2.07
ETFA-215ENST00000560595 MORC1Q86VD1 984 aa27.97■■■□□ 2.07
ETFA-215ENST00000560595 THRAP3Q9Y2W1 955 aaKnown RBP27.97■■■□□ 2.07
ETFA-215ENST00000560595 EP400Q96L91 3159 aa27.97■■■□□ 2.07
ETFA-215ENST00000560595 LTV1Q96GA3 475 aaPredicted RBP27.96■■■□□ 2.07
ETFA-215ENST00000560595 CARD10Q9BWT7 1032 aa27.96■■■□□ 2.07
ETFA-215ENST00000560595 LRRC37A3O60309 1634 aa27.94■■■□□ 2.06
ETFA-215ENST00000560595 POLKQ9UBT6 870 aa27.94■■■□□ 2.06
ETFA-215ENST00000560595 INSRP06213 1382 aa27.94■■■□□ 2.06
ETFA-215ENST00000560595 NPC1L1Q9UHC9 1359 aa27.94■■■□□ 2.06
ETFA-215ENST00000560595 CC2D1BQ5T0F9 858 aaKnown RBP27.93■■■□□ 2.06
ETFA-215ENST00000560595 NLRP2Q9NX02 1062 aa27.93■■■□□ 2.06
ETFA-215ENST00000560595 HSP90AB2PQ58FF8 381 aa27.92■■■□□ 2.06
ETFA-215ENST00000560595 SMG6Q86US8 1419 aaKnown RBP27.92■■■□□ 2.06
ETFA-215ENST00000560595 PPM1GO15355 546 aaPredicted RBP27.91■■■□□ 2.06
ETFA-215ENST00000560595 DISP2A7MBM2 1401 aa27.9■■■□□ 2.06
ETFA-215ENST00000560595 KRT27Q7Z3Y8 459 aa27.89■■■□□ 2.06
ETFA-215ENST00000560595 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
ETFA-215ENST00000560595 CDCA7Q9BWT1 371 aaPredicted RBP27.83■■■□□ 2.05
ETFA-215ENST00000560595 UPF1Q92900 1129 aaKnown RBP eCLIP27.82■■■□□ 2.04
ETFA-215ENST00000560595 NBPF6Q5VWK0 638 aa27.81■■■□□ 2.04
ETFA-215ENST00000560595 NBPF4Q96M43 638 aa27.81■■■□□ 2.04
ETFA-215ENST00000560595 DDX10Q13206 875 aaKnown RBP27.8■■■□□ 2.04
ETFA-215ENST00000560595 FAM182BQ5T319 152 aa27.8■■■□□ 2.04
ETFA-215ENST00000560595 TNS2Q63HR2 1409 aa27.79■■■□□ 2.04
ETFA-215ENST00000560595 PDE3BQ13370 1112 aa27.79■■■□□ 2.04
ETFA-215ENST00000560595 DDB1Q16531 1140 aa27.79■■■□□ 2.04
ETFA-215ENST00000560595 USHBP1Q8N6Y0 703 aa27.79■■■□□ 2.04
ETFA-215ENST00000560595 IL2RBP14784 551 aa27.78■■■□□ 2.04
ETFA-215ENST00000560595 EIF4A2Q14240 407 aaKnown RBP27.77■■■□□ 2.04
ETFA-215ENST00000560595 MEGF6O75095 1541 aa27.77■■■□□ 2.04
ETFA-215ENST00000560595 NCAPD2Q15021 1401 aa27.76■■■□□ 2.04
ETFA-215ENST00000560595 SHANK3Q9BYB0 1731 aa27.76■■■□□ 2.03
ETFA-215ENST00000560595 MTHFSP49914 203 aa27.75■■■□□ 2.03
ETFA-215ENST00000560595 SBF2Q86WG5 1849 aa27.74■■■□□ 2.03
ETFA-215ENST00000560595 RGPD1P0DJD0 1748 aa27.74■■■□□ 2.03
ETFA-215ENST00000560595 EXOC5O00471 708 aa27.72■■■□□ 2.03
ETFA-215ENST00000560595 EYA1Q99502 592 aa27.72■■■□□ 2.03
ETFA-215ENST00000560595 TNS1Q9HBL0 1735 aaKnown RBP27.72■■■□□ 2.03
ETFA-215ENST00000560595 OVOS2A0A0G2JMS6 1433 aa27.71■■■□□ 2.03
ETFA-215ENST00000560595 ZNF316A6NFI3 1004 aaPredicted RBP27.7■■■□□ 2.02
ETFA-215ENST00000560595 MARCH10Q8NA82 808 aaPredicted RBP27.7■■■□□ 2.02
ETFA-215ENST00000560595 FAM196AQ6ZSG2 479 aa27.69■■■□□ 2.02
ETFA-215ENST00000560595 PKD1L3Q7Z443 1732 aa27.69■■■□□ 2.02
ETFA-215ENST00000560595 COL3A1P02461 1466 aaPredicted RBP27.69■■■□□ 2.02
ETFA-215ENST00000560595 PARD3Q8TEW0 1356 aa27.68■■■□□ 2.02
ETFA-215ENST00000560595 IGSF1Q8N6C5 1336 aa27.67■■■□□ 2.02
ETFA-215ENST00000560595 RAPGEF4Q8WZA2 1011 aa27.67■■■□□ 2.02
ETFA-215ENST00000560595 PPP2R1AP30153 589 aa27.66■■■□□ 2.02
ETFA-215ENST00000560595 IL13P35225 146 aa27.66■■■□□ 2.02
ETFA-215ENST00000560595 TATP17735 454 aaPredicted RBP27.65■■■□□ 2.02
ETFA-215ENST00000560595 CCDC125Q86Z20 511 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 210.9 ms