RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 GIGYF2Q6Y7W6 1299 aaKnown RBP6.39□□□□□ -1.39
HMGB3P26-201ENST00000560051 AEBP1Q8IUX7 1158 aa6.39□□□□□ -1.39
HMGB3P26-201ENST00000560051 CCDC82Q8N4S0 544 aa6.39□□□□□ -1.39
HMGB3P26-201ENST00000560051 ARMC2Q8NEN0 867 aa6.39□□□□□ -1.39
HMGB3P26-201ENST00000560051 IL27Q8NEV9 243 aa6.39□□□□□ -1.39
HMGB3P26-201ENST00000560051 MFAP1P55081 439 aaKnown RBP6.38□□□□□ -1.39
HMGB3P26-201ENST00000560051 SETQ01105 290 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P26-201ENST00000560051 TMCO4Q5TGY1 634 aa6.38□□□□□ -1.39
HMGB3P26-201ENST00000560051 TSC1Q92574 1164 aa6.38□□□□□ -1.39
HMGB3P26-201ENST00000560051 FOXJ1Q92949 421 aa6.38□□□□□ -1.39
HMGB3P26-201ENST00000560051 TBC1D2Q9BYX2 928 aa6.38□□□□□ -1.39
HMGB3P26-201ENST00000560051 ZFAND3Q9H8U3 227 aa6.38□□□□□ -1.39
HMGB3P26-201ENST00000560051 ZMYND10O75800 440 aa6.37□□□□□ -1.39
HMGB3P26-201ENST00000560051 CANXP27824 592 aaKnown RBP6.37□□□□□ -1.39
HMGB3P26-201ENST00000560051 AMHR2Q16671 573 aa6.37□□□□□ -1.39
HMGB3P26-201ENST00000560051 RSBN1LQ6PCB5 846 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P26-201ENST00000560051 ITPKCQ96DU7 683 aa6.37□□□□□ -1.39
HMGB3P26-201ENST00000560051 KLF16Q9BXK1 252 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P26-201ENST00000560051 NUTM2BA6NNL0 878 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P26-201ENST00000560051 NUTM2EB1AL46 878 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P26-201ENST00000560051 PPFIA3O75145 1194 aa6.36□□□□□ -1.39
HMGB3P26-201ENST00000560051 NUTM2DQ5VT03 806 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P26-201ENST00000560051 PRPF38BQ5VTL8 546 aaKnown RBP6.36□□□□□ -1.39
HMGB3P26-201ENST00000560051 BARGINQ6ZT62 677 aa6.36□□□□□ -1.39
HMGB3P26-201ENST00000560051 NUTM2AQ8IVF1 878 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P26-201ENST00000560051 LINC00528Q8N1L1 170 aa6.36□□□□□ -1.39
HMGB3P26-201ENST00000560051 GPBP1L1Q9HC44 474 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P26-201ENST00000560051 MAP10Q9P2G4 905 aa6.36□□□□□ -1.39
HMGB3P26-201ENST00000560051 RNF225M0QZC1 329 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P26-201ENST00000560051 NAP1L5Q96NT1 182 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P26-201ENST00000560051 TSEN34Q9BSV6 310 aaKnown RBP6.35□□□□□ -1.39
HMGB3P26-201ENST00000560051 CFAP99D6REC4 459 aa6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 E9PSI1 815 aa6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 PTMSP20962 102 aa6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 KCNMA1Q12791 1236 aa6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 CSPP1Q1MSJ5 1256 aa6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 NBPF14Q5TI25 921 aa6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 VASH1Q7L8A9 365 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 RIC3Q7Z5B4 369 aa6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 GZF1Q9H116 711 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 PCDHB15Q9Y5E8 787 aa6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 EMILIN1Q9Y6C2 1016 aa6.34□□□□□ -1.39
HMGB3P26-201ENST00000560051 F12P00748 615 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P26-201ENST00000560051 ZEB1P37275 1124 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P26-201ENST00000560051 GRM5P41594 1212 aa6.33□□□□□ -1.4
HMGB3P26-201ENST00000560051 TMEM151AQ8N4L1 468 aa6.33□□□□□ -1.4
HMGB3P26-201ENST00000560051 MEIOBQ8N635 442 aa6.33□□□□□ -1.4
HMGB3P26-201ENST00000560051 USP35Q9P2H5 1018 aa6.33□□□□□ -1.4
HMGB3P26-201ENST00000560051 NR3C2P08235 984 aa6.32□□□□□ -1.4
HMGB3P26-201ENST00000560051 FSHRP23945 695 aa6.32□□□□□ -1.4
HMGB3P26-201ENST00000560051 ERICH6BQ5W0A0 696 aa6.32□□□□□ -1.4
HMGB3P26-201ENST00000560051 HELBQ8NG08 1087 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P26-201ENST00000560051 SOS2Q07890 1332 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P26-201ENST00000560051 ARID4BQ4LE39 1312 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P26-201ENST00000560051 CLSPNQ9HAW4 1339 aa6.31□□□□□ -1.4
HMGB3P26-201ENST00000560051 MAGEB6P1A0A0J9YX57 407 aa6.31□□□□□ -1.4
HMGB3P26-201ENST00000560051 TTLL8A6PVC2 850 aa6.31□□□□□ -1.4
HMGB3P26-201ENST00000560051 CCDC116Q8IYX3 515 aa6.31□□□□□ -1.4
HMGB3P26-201ENST00000560051 PGPEP1Q9NXJ5 209 aa6.31□□□□□ -1.4
HMGB3P26-201ENST00000560051 MAP4K5Q9Y4K4 846 aa6.31□□□□□ -1.4
HMGB3P26-201ENST00000560051 GDF11O95390 407 aa6.3□□□□□ -1.4
HMGB3P26-201ENST00000560051 NCLP19338 710 aaKnown RBP6.3□□□□□ -1.4
HMGB3P26-201ENST00000560051 FAM177A1Q8N128 213 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P26-201ENST00000560051 CABLES1Q8TDN4 633 aa6.3□□□□□ -1.4
HMGB3P26-201ENST00000560051 ZNF592Q92610 1267 aa6.3□□□□□ -1.4
HMGB3P26-201ENST00000560051 CNTNAP3BQ96NU0 1288 aa6.3□□□□□ -1.4
HMGB3P26-201ENST00000560051 CNTNAP3Q9BZ76 1288 aa6.3□□□□□ -1.4
HMGB3P26-201ENST00000560051 DNMT3LQ9UJW3 386 aa6.3□□□□□ -1.4
HMGB3P26-201ENST00000560051 TRAK2O60296 914 aa6.29□□□□□ -1.4
HMGB3P26-201ENST00000560051 SUZ12Q15022 739 aaKnown RBP6.29□□□□□ -1.4
HMGB3P26-201ENST00000560051 C4orf48Q5BLP8 95 aa6.29□□□□□ -1.4
HMGB3P26-201ENST00000560051 PARP9Q8IXQ6 854 aa6.29□□□□□ -1.4
HMGB3P26-201ENST00000560051 GPKOWQ92917 476 aaPredicted RBP eCLIP6.29□□□□□ -1.4
HMGB3P26-201ENST00000560051 FIGNL2A6NMB9 653 aa6.28□□□□□ -1.4
HMGB3P26-201ENST00000560051 PER1O15534 1290 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P26-201ENST00000560051 RASSF7Q02833 373 aa6.28□□□□□ -1.4
HMGB3P26-201ENST00000560051 PTSQ03393 145 aa6.28□□□□□ -1.4
HMGB3P26-201ENST00000560051 GLIPR1L2Q4G1C9 344 aa6.28□□□□□ -1.4
HMGB3P26-201ENST00000560051 TRMT44Q8IYL2 757 aaKnown RBP6.28□□□□□ -1.4
HMGB3P26-201ENST00000560051 AK7Q96M32 723 aa6.28□□□□□ -1.4
HMGB3P26-201ENST00000560051 CARD14Q9BXL6 1004 aa6.28□□□□□ -1.4
HMGB3P26-201ENST00000560051 KDM4CQ9H3R0 1056 aa6.28□□□□□ -1.4
HMGB3P26-201ENST00000560051 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
HMGB3P26-201ENST00000560051 PPM1GO15355 546 aaPredicted RBP6.27□□□□□ -1.41
HMGB3P26-201ENST00000560051 SVOPQ8N4V2 548 aa6.27□□□□□ -1.41
HMGB3P26-201ENST00000560051 C1QTNF2Q9BXJ5 285 aa6.27□□□□□ -1.41
HMGB3P26-201ENST00000560051 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
HMGB3P26-201ENST00000560051 CDV3Q9UKY7 258 aaKnown RBP6.27□□□□□ -1.41
HMGB3P26-201ENST00000560051 ADAMTS8Q9UP79 889 aa6.27□□□□□ -1.41
HMGB3P26-201ENST00000560051 TRIM66O15016 1216 aa6.26□□□□□ -1.41
HMGB3P26-201ENST00000560051 MARSP56192 900 aaKnown RBP6.26□□□□□ -1.41
HMGB3P26-201ENST00000560051 DHX9Q08211 1270 aaKnown RBP6.26□□□□□ -1.41
HMGB3P26-201ENST00000560051 FLIIQ13045 1269 aa6.26□□□□□ -1.41
HMGB3P26-201ENST00000560051 TUSC1Q2TAM9 212 aa6.26□□□□□ -1.41
HMGB3P26-201ENST00000560051 SH3RF1Q7Z6J0 888 aa6.26□□□□□ -1.41
HMGB3P26-201ENST00000560051 CERS3Q8IU89 383 aa6.26□□□□□ -1.41
HMGB3P26-201ENST00000560051 COL25A1Q9BXS0 654 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P26-201ENST00000560051 A6NJR5 290 aa6.25□□□□□ -1.41
HMGB3P26-201ENST00000560051 PPP1R26Q5T8A7 1209 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms