RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 PLEKHG5O94827 1062 aa19.16■□□□□ 0.66
ARHGEF40-208ENST00000557498 ARHGEF25Q86VW2 580 aa19.16■□□□□ 0.66
ARHGEF40-208ENST00000557498 IP6K1Q92551 441 aa19.16■□□□□ 0.66
ARHGEF40-208ENST00000557498 PNNQ9H307 717 aaKnown RBP19.16■□□□□ 0.66
ARHGEF40-208ENST00000557498 APAF1O14727 1248 aa19.15■□□□□ 0.66
ARHGEF40-208ENST00000557498 NGEFQ8N5V2 710 aa19.15■□□□□ 0.66
ARHGEF40-208ENST00000557498 PLEKHF1Q96S99 279 aa19.15■□□□□ 0.66
ARHGEF40-208ENST00000557498 ABCC6O95255 1503 aa19.15■□□□□ 0.66
ARHGEF40-208ENST00000557498 FCHSD2O94868 740 aa19.14■□□□□ 0.65
ARHGEF40-208ENST00000557498 RSPH6AQ9H0K4 717 aa19.14■□□□□ 0.65
ARHGEF40-208ENST00000557498 SALL2Q9Y467 1007 aaPredicted RBP19.14■□□□□ 0.65
ARHGEF40-208ENST00000557498 PHLPP1O60346 1717 aa19.14■□□□□ 0.65
ARHGEF40-208ENST00000557498 COL18A1P39060 1754 aa19.12■□□□□ 0.65
ARHGEF40-208ENST00000557498 MAPK8IP3Q9UPT6 1336 aa19.12■□□□□ 0.65
ARHGEF40-208ENST00000557498 ZBTB7CA1YPR0 619 aa19.12■□□□□ 0.65
ARHGEF40-208ENST00000557498 COL16A1Q07092 1604 aaPredicted RBP19.11■□□□□ 0.65
ARHGEF40-208ENST00000557498 COL22A1Q8NFW1 1626 aaPredicted RBP19.11■□□□□ 0.65
ARHGEF40-208ENST00000557498 CPDO75976 1380 aa19.11■□□□□ 0.65
ARHGEF40-208ENST00000557498 HMOX1P09601 288 aa19.11■□□□□ 0.65
ARHGEF40-208ENST00000557498 PRKAR2BP31323 418 aa19.11■□□□□ 0.65
ARHGEF40-208ENST00000557498 TCP11L2Q8N4U5 519 aa19.11■□□□□ 0.65
ARHGEF40-208ENST00000557498 CABLES1Q8TDN4 633 aa19.11■□□□□ 0.65
ARHGEF40-208ENST00000557498 IGSF1Q8N6C5 1336 aa19.1■□□□□ 0.65
ARHGEF40-208ENST00000557498 ZNF521Q96K83 1311 aa19.1■□□□□ 0.65
ARHGEF40-208ENST00000557498 PDE3BQ13370 1112 aa19.1■□□□□ 0.65
ARHGEF40-208ENST00000557498 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
ARHGEF40-208ENST00000557498 RGPD5Q99666 1765 aa19.09■□□□□ 0.65
ARHGEF40-208ENST00000557498 UBAP1LF5GYI3 381 aa19.09■□□□□ 0.65
ARHGEF40-208ENST00000557498 ZC3H6P61129 1189 aaKnown RBP19.09■□□□□ 0.65
ARHGEF40-208ENST00000557498 LRRC59Q96AG4 307 aaKnown RBP19.09■□□□□ 0.65
ARHGEF40-208ENST00000557498 NEFMP07197 916 aa19.08■□□□□ 0.64
ARHGEF40-208ENST00000557498 SULT6B1Q6IMI4 303 aa19.08■□□□□ 0.64
ARHGEF40-208ENST00000557498 CERKQ8TCT0 537 aa19.08■□□□□ 0.64
ARHGEF40-208ENST00000557498 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.64
ARHGEF40-208ENST00000557498 KDRP35968 1356 aa19.07■□□□□ 0.64
ARHGEF40-208ENST00000557498 PIP4K2BP78356 416 aa19.07■□□□□ 0.64
ARHGEF40-208ENST00000557498 AEBP1Q8IUX7 1158 aa19.07■□□□□ 0.64
ARHGEF40-208ENST00000557498 LTV1Q96GA3 475 aaPredicted RBP19.07■□□□□ 0.64
ARHGEF40-208ENST00000557498 EYA1Q99502 592 aa19.07■□□□□ 0.64
ARHGEF40-208ENST00000557498 RRP7AQ9Y3A4 280 aaKnown RBP19.07■□□□□ 0.64
ARHGEF40-208ENST00000557498 KIAA0232Q92628 1395 aa19.06■□□□□ 0.64
ARHGEF40-208ENST00000557498 CCDC27Q2M243 656 aa19.06■□□□□ 0.64
ARHGEF40-208ENST00000557498 RGPD2P0DJD1 1756 aa19.06■□□□□ 0.64
ARHGEF40-208ENST00000557498 TMPOP42166 694 aaKnown RBP19.05■□□□□ 0.64
ARHGEF40-208ENST00000557498 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF40-208ENST00000557498 LMO7Q8WWI1 1683 aa19.05■□□□□ 0.64
ARHGEF40-208ENST00000557498 FAM208AQ9UK61 1670 aaKnown RBP19.05■□□□□ 0.64
ARHGEF40-208ENST00000557498 HAP1P54257 671 aaPredicted RBP19.04■□□□□ 0.64
ARHGEF40-208ENST00000557498 ANKRD24Q8TF21 1146 aa19.04■□□□□ 0.64
ARHGEF40-208ENST00000557498 NCAPD2Q15021 1401 aa19.03■□□□□ 0.64
ARHGEF40-208ENST00000557498 NEUROD2Q15784 382 aa19.03■□□□□ 0.64
ARHGEF40-208ENST00000557498 NFE2L2Q16236 605 aa19.03■□□□□ 0.64
ARHGEF40-208ENST00000557498 WWC1Q8IX03 1113 aa19.03■□□□□ 0.64
ARHGEF40-208ENST00000557498 PHACTR3Q96KR7 559 aa19.03■□□□□ 0.64
ARHGEF40-208ENST00000557498 AXIN2Q9Y2T1 843 aa19.03■□□□□ 0.64
ARHGEF40-208ENST00000557498 GOLGA2Q08379 1002 aa19.02■□□□□ 0.64
ARHGEF40-208ENST00000557498 ERBB3P21860 1342 aa19.01■□□□□ 0.63
ARHGEF40-208ENST00000557498 CHRNA2Q15822 529 aa19.01■□□□□ 0.63
ARHGEF40-208ENST00000557498 CDCA7LQ96GN5 454 aa19.01■□□□□ 0.63
ARHGEF40-208ENST00000557498 PRDM11Q9NQV5 511 aa19.01■□□□□ 0.63
ARHGEF40-208ENST00000557498 DLG5Q8TDM6 1919 aa19.01■□□□□ 0.63
ARHGEF40-208ENST00000557498 RIPK4P57078 832 aa18.99■□□□□ 0.63
ARHGEF40-208ENST00000557498 NBPF6Q5VWK0 638 aa18.99■□□□□ 0.63
ARHGEF40-208ENST00000557498 WDR63Q8IWG1 891 aa18.99■□□□□ 0.63
ARHGEF40-208ENST00000557498 NBPF4Q96M43 638 aa18.99■□□□□ 0.63
ARHGEF40-208ENST00000557498 TRIM35Q9UPQ4 493 aa18.99■□□□□ 0.63
ARHGEF40-208ENST00000557498 USHBP1Q8N6Y0 703 aa18.98■□□□□ 0.63
ARHGEF40-208ENST00000557498 COL14A1Q05707 1796 aaKnown RBP18.98■□□□□ 0.63
ARHGEF40-208ENST00000557498 SLFN5Q08AF3 891 aa18.97■□□□□ 0.63
ARHGEF40-208ENST00000557498 E9PSI1 815 aa18.96■□□□□ 0.63
ARHGEF40-208ENST00000557498 LMOD3Q0VAK6 560 aa18.96■□□□□ 0.63
ARHGEF40-208ENST00000557498 COL5A2P05997 1499 aaPredicted RBP18.96■□□□□ 0.63
ARHGEF40-208ENST00000557498 TRMT2AQ8IZ69 625 aaKnown RBP18.95■□□□□ 0.62
ARHGEF40-208ENST00000557498 DUSP27Q5VZP5 1158 aa18.94■□□□□ 0.62
ARHGEF40-208ENST00000557498 GAS2L2Q8NHY3 880 aa18.94■□□□□ 0.62
ARHGEF40-208ENST00000557498 SPINK5Q9NQ38 1064 aaPredicted RBP18.94■□□□□ 0.62
ARHGEF40-208ENST00000557498 CSB-PGBD3P0DP91 1061 aa18.93■□□□□ 0.62
ARHGEF40-208ENST00000557498 IL16Q14005 1332 aa18.93■□□□□ 0.62
ARHGEF40-208ENST00000557498 FAM83GA6ND36 823 aa18.92■□□□□ 0.62
ARHGEF40-208ENST00000557498 MTHFSDQ2M296 383 aaKnown RBP18.92■□□□□ 0.62
ARHGEF40-208ENST00000557498 NLRP2Q9NX02 1062 aa18.91■□□□□ 0.62
ARHGEF40-208ENST00000557498 WDR17Q8IZU2 1322 aa18.91■□□□□ 0.62
ARHGEF40-208ENST00000557498 PLCH1Q4KWH8 1693 aa18.91■□□□□ 0.62
ARHGEF40-208ENST00000557498 JCADQ9P266 1359 aa18.91■□□□□ 0.62
ARHGEF40-208ENST00000557498 CALD1Q05682 793 aaKnown RBP18.9■□□□□ 0.62
ARHGEF40-208ENST00000557498 MYH16Q9H6N6 1097 aa18.89■□□□□ 0.61
ARHGEF40-208ENST00000557498 PLEKHG2Q9H7P9 1386 aa18.89■□□□□ 0.61
ARHGEF40-208ENST00000557498 LRRC37A3O60309 1634 aa18.89■□□□□ 0.61
ARHGEF40-208ENST00000557498 MEGF6O75095 1541 aa18.87■□□□□ 0.61
ARHGEF40-208ENST00000557498 PLEKHO1Q53GL0 409 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF40-208ENST00000557498 NRAPQ86VF7 1730 aa18.87■□□□□ 0.61
ARHGEF40-208ENST00000557498 MAP3K5Q99683 1374 aa18.87■□□□□ 0.61
ARHGEF40-208ENST00000557498 PARP4Q9UKK3 1724 aaKnown RBP18.87■□□□□ 0.61
ARHGEF40-208ENST00000557498 SUPT16HQ9Y5B9 1047 aaKnown RBP18.87■□□□□ 0.61
ARHGEF40-208ENST00000557498 PKD1L3Q7Z443 1732 aa18.86■□□□□ 0.61
ARHGEF40-208ENST00000557498 HTATSF1O43719 755 aaKnown RBP18.86■□□□□ 0.61
ARHGEF40-208ENST00000557498 AMOTQ4VCS5 1084 aa18.86■□□□□ 0.61
ARHGEF40-208ENST00000557498 THUMPD2Q9BTF0 503 aaKnown RBP18.86■□□□□ 0.61
ARHGEF40-208ENST00000557498 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
ARHGEF40-208ENST00000557498 TATP17735 454 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms