RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 STRN4Q9NRL3 753 aa33.85■■■■□ 3.01
SDR39U1-221ENST00000556707 COL5A2P05997 1499 aaPredicted RBP33.83■■■■□ 3.01
SDR39U1-221ENST00000556707 RGS12O14924 1447 aa33.83■■■■□ 3.01
SDR39U1-221ENST00000556707 EVA1CP58658 441 aa33.83■■■■□ 3.01
SDR39U1-221ENST00000556707 ANKRD26Q9UPS8 1709 aa33.82■■■■□ 3
SDR39U1-221ENST00000556707 AXIN2Q9Y2T1 843 aa33.81■■■■□ 3
SDR39U1-221ENST00000556707 SPATA31A5Q5VU36 1347 aa33.8■■■■□ 3
SDR39U1-221ENST00000556707 SPATA31A7Q8IWB4 1347 aa33.8■■■■□ 3
SDR39U1-221ENST00000556707 LARP1Q6PKG0 1096 aaKnown RBP33.77■■■■□ 3
SDR39U1-221ENST00000556707 SPATA31A1Q5TZJ5 1347 aa33.76■■■□□ 2.99
SDR39U1-221ENST00000556707 FBLN1P23142 703 aa33.75■■■□□ 2.99
SDR39U1-221ENST00000556707 KNSTRNQ9Y448 316 aa33.75■■■□□ 2.99
SDR39U1-221ENST00000556707 MAP3K19Q56UN5 1328 aa33.74■■■□□ 2.99
SDR39U1-221ENST00000556707 SOCS7O14512 581 aa33.73■■■□□ 2.99
SDR39U1-221ENST00000556707 ONECUT3O60422 494 aaPredicted RBP33.73■■■□□ 2.99
SDR39U1-221ENST00000556707 NSD2O96028 1365 aa33.72■■■□□ 2.99
SDR39U1-221ENST00000556707 MAP2P11137 1827 aaKnown RBP33.72■■■□□ 2.99
SDR39U1-221ENST00000556707 CRB1P82279 1406 aa33.71■■■□□ 2.99
SDR39U1-221ENST00000556707 BRWD3Q6RI45 1802 aa33.71■■■□□ 2.99
SDR39U1-221ENST00000556707 WDR17Q8IZU2 1322 aa33.71■■■□□ 2.99
SDR39U1-221ENST00000556707 FAM98CQ17RN3 349 aaKnown RBP33.7■■■□□ 2.99
SDR39U1-221ENST00000556707 IP6K1Q92551 441 aa33.7■■■□□ 2.99
SDR39U1-221ENST00000556707 RRS1Q15050 365 aaKnown RBP33.69■■■□□ 2.98
SDR39U1-221ENST00000556707 BLMP54132 1417 aaPredicted RBP33.69■■■□□ 2.98
SDR39U1-221ENST00000556707 PER1O15534 1290 aaPredicted RBP33.68■■■□□ 2.98
SDR39U1-221ENST00000556707 USP35Q9P2H5 1018 aa33.68■■■□□ 2.98
SDR39U1-221ENST00000556707 AMPHP49418 695 aa33.67■■■□□ 2.98
SDR39U1-221ENST00000556707 SEPT12Q8IYM1 358 aa33.67■■■□□ 2.98
SDR39U1-221ENST00000556707 RTL1A6NKG5 1358 aa33.66■■■□□ 2.98
SDR39U1-221ENST00000556707 TOM1L2Q6ZVM7 507 aa33.66■■■□□ 2.98
SDR39U1-221ENST00000556707 TCP11L2Q8N4U5 519 aa33.66■■■□□ 2.98
SDR39U1-221ENST00000556707 THSD7AQ9UPZ6 1657 aa33.66■■■□□ 2.98
SDR39U1-221ENST00000556707 ERBB3P21860 1342 aa33.65■■■□□ 2.98
SDR39U1-221ENST00000556707 CSB-PGBD3P0DP91 1061 aa33.65■■■□□ 2.98
SDR39U1-221ENST00000556707 HOXC9P31274 260 aa33.65■■■□□ 2.98
SDR39U1-221ENST00000556707 AMER1Q5JTC6 1135 aaPredicted RBP33.65■■■□□ 2.98
SDR39U1-221ENST00000556707 BARGINQ6ZT62 677 aa33.64■■■□□ 2.98
SDR39U1-221ENST00000556707 THRAP3Q9Y2W1 955 aaKnown RBP33.64■■■□□ 2.98
SDR39U1-221ENST00000556707 PEAK1Q9H792 1746 aa33.63■■■□□ 2.97
SDR39U1-221ENST00000556707 A0A0G2JS52 829 aa33.62■■■□□ 2.97
SDR39U1-221ENST00000556707 MYT1Q01538 1121 aa33.62■■■□□ 2.97
SDR39U1-221ENST00000556707 ANKRD24Q8TF21 1146 aa33.62■■■□□ 2.97
SDR39U1-221ENST00000556707 KIF24Q5T7B8 1368 aa33.61■■■□□ 2.97
SDR39U1-221ENST00000556707 CARD10Q9BWT7 1032 aa33.61■■■□□ 2.97
SDR39U1-221ENST00000556707 FAM208AQ9UK61 1670 aaKnown RBP33.61■■■□□ 2.97
SDR39U1-221ENST00000556707 WNK3Q9BYP7 1800 aa33.59■■■□□ 2.97
SDR39U1-221ENST00000556707 MORC1Q86VD1 984 aa33.59■■■□□ 2.97
SDR39U1-221ENST00000556707 FLT4P35916 1363 aa33.59■■■□□ 2.97
SDR39U1-221ENST00000556707 EMILIN1Q9Y6C2 1016 aa33.58■■■□□ 2.97
SDR39U1-221ENST00000556707 TNNT2P45379 298 aaPredicted RBP33.57■■■□□ 2.96
SDR39U1-221ENST00000556707 LTV1Q96GA3 475 aaPredicted RBP33.55■■■□□ 2.96
SDR39U1-221ENST00000556707 NLRP2Q9NX02 1062 aa33.55■■■□□ 2.96
SDR39U1-221ENST00000556707 POLKQ9UBT6 870 aa33.55■■■□□ 2.96
SDR39U1-221ENST00000556707 NPC1L1Q9UHC9 1359 aa33.55■■■□□ 2.96
SDR39U1-221ENST00000556707 RGPD2P0DJD1 1756 aa33.55■■■□□ 2.96
SDR39U1-221ENST00000556707 PARP4Q9UKK3 1724 aaKnown RBP33.54■■■□□ 2.96
SDR39U1-221ENST00000556707 INSRP06213 1382 aa33.54■■■□□ 2.96
SDR39U1-221ENST00000556707 KRT27Q7Z3Y8 459 aa33.53■■■□□ 2.96
SDR39U1-221ENST00000556707 HSP90AB2PQ58FF8 381 aa33.52■■■□□ 2.96
SDR39U1-221ENST00000556707 PPM1GO15355 546 aaPredicted RBP33.51■■■□□ 2.95
SDR39U1-221ENST00000556707 CC2D1BQ5T0F9 858 aaKnown RBP33.5■■■□□ 2.95
SDR39U1-221ENST00000556707 EP400Q96L91 3159 aa33.5■■■□□ 2.95
SDR39U1-221ENST00000556707 SMG6Q86US8 1419 aaKnown RBP33.48■■■□□ 2.95
SDR39U1-221ENST00000556707 CDCA7Q9BWT1 371 aaPredicted RBP33.48■■■□□ 2.95
SDR39U1-221ENST00000556707 DISP2A7MBM2 1401 aa33.47■■■□□ 2.95
SDR39U1-221ENST00000556707 LRRC37A3O60309 1634 aa33.46■■■□□ 2.95
SDR39U1-221ENST00000556707 UPF1Q92900 1129 aaKnown RBP eCLIP33.44■■■□□ 2.94
SDR39U1-221ENST00000556707 PDE3BQ13370 1112 aa33.42■■■□□ 2.94
SDR39U1-221ENST00000556707 CNGB1Q14028 1251 aaPredicted RBP33.4■■■□□ 2.94
SDR39U1-221ENST00000556707 DDB1Q16531 1140 aa33.4■■■□□ 2.94
SDR39U1-221ENST00000556707 NBPF6Q5VWK0 638 aa33.4■■■□□ 2.94
SDR39U1-221ENST00000556707 NBPF4Q96M43 638 aa33.4■■■□□ 2.94
SDR39U1-221ENST00000556707 IL2RBP14784 551 aa33.39■■■□□ 2.94
SDR39U1-221ENST00000556707 FAM182BQ5T319 152 aa33.36■■■□□ 2.93
SDR39U1-221ENST00000556707 DDX10Q13206 875 aaKnown RBP33.35■■■□□ 2.93
SDR39U1-221ENST00000556707 EXOC5O00471 708 aa33.34■■■□□ 2.93
SDR39U1-221ENST00000556707 EIF4A2Q14240 407 aaKnown RBP33.33■■■□□ 2.93
SDR39U1-221ENST00000556707 USHBP1Q8N6Y0 703 aa33.33■■■□□ 2.93
SDR39U1-221ENST00000556707 TNS2Q63HR2 1409 aa33.33■■■□□ 2.93
SDR39U1-221ENST00000556707 MTHFSP49914 203 aa33.32■■■□□ 2.92
SDR39U1-221ENST00000556707 FAM196AQ6ZSG2 479 aa33.31■■■□□ 2.92
SDR39U1-221ENST00000556707 NCAPD2Q15021 1401 aa33.3■■■□□ 2.92
SDR39U1-221ENST00000556707 CCDC125Q86Z20 511 aa33.29■■■□□ 2.92
SDR39U1-221ENST00000556707 EYA1Q99502 592 aa33.29■■■□□ 2.92
SDR39U1-221ENST00000556707 MEGF6O75095 1541 aa33.28■■■□□ 2.92
SDR39U1-221ENST00000556707 MARCH10Q8NA82 808 aaPredicted RBP33.27■■■□□ 2.92
SDR39U1-221ENST00000556707 OVOS2A0A0G2JMS6 1433 aa33.27■■■□□ 2.92
SDR39U1-221ENST00000556707 SBF2Q86WG5 1849 aa33.26■■■□□ 2.92
SDR39U1-221ENST00000556707 RGPD1P0DJD0 1748 aa33.25■■■□□ 2.91
SDR39U1-221ENST00000556707 RAPGEF4Q8WZA2 1011 aa33.25■■■□□ 2.91
SDR39U1-221ENST00000556707 KAT6BQ8WYB5 2073 aa33.25■■■□□ 2.91
SDR39U1-221ENST00000556707 SHANK3Q9BYB0 1731 aa33.23■■■□□ 2.91
SDR39U1-221ENST00000556707 ZNF316A6NFI3 1004 aaPredicted RBP33.23■■■□□ 2.91
SDR39U1-221ENST00000556707 TATP17735 454 aaPredicted RBP33.22■■■□□ 2.91
SDR39U1-221ENST00000556707 IGSF1Q8N6C5 1336 aa33.22■■■□□ 2.91
SDR39U1-221ENST00000556707 BCL9O00512 1426 aa33.2■■■□□ 2.91
SDR39U1-221ENST00000556707 IL13P35225 146 aa33.2■■■□□ 2.91
SDR39U1-221ENST00000556707 PARD3Q8TEW0 1356 aa33.2■■■□□ 2.9
SDR39U1-221ENST00000556707 TNS1Q9HBL0 1735 aaKnown RBP33.19■■■□□ 2.9
SDR39U1-221ENST00000556707 ZCRB1Q8TBF4 217 aaKnown RBP33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms