RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 POLKQ9UBT6 870 aa19.2■□□□□ 0.66
SNX6-206ENST00000556162 EMILIN1Q9Y6C2 1016 aa19.2■□□□□ 0.66
SNX6-206ENST00000556162 TRPC5Q9UL62 973 aaPredicted RBP19.2■□□□□ 0.66
SNX6-206ENST00000556162 CAMTA1Q9Y6Y1 1673 aa19.19■□□□□ 0.66
SNX6-206ENST00000556162 HOXC9P31274 260 aa19.19■□□□□ 0.66
SNX6-206ENST00000556162 KIF24Q5T7B8 1368 aa19.19■□□□□ 0.66
SNX6-206ENST00000556162 PLCH1Q4KWH8 1693 aa19.18■□□□□ 0.66
SNX6-206ENST00000556162 LTN1O94822 1766 aa19.18■□□□□ 0.66
SNX6-206ENST00000556162 CCDC9Q9Y3X0 531 aaKnown RBP19.18■□□□□ 0.66
SNX6-206ENST00000556162 RTL1A6NKG5 1358 aa19.17■□□□□ 0.66
SNX6-206ENST00000556162 NWD2Q9ULI1 1742 aa19.17■□□□□ 0.66
SNX6-206ENST00000556162 VPS72Q15906 364 aa19.17■□□□□ 0.66
SNX6-206ENST00000556162 FLT4P35916 1363 aa19.17■□□□□ 0.66
SNX6-206ENST00000556162 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
SNX6-206ENST00000556162 ABCC6O95255 1503 aa19.17■□□□□ 0.66
SNX6-206ENST00000556162 CSB-PGBD3P0DP91 1061 aa19.16■□□□□ 0.66
SNX6-206ENST00000556162 COL18A1P39060 1754 aa19.16■□□□□ 0.66
SNX6-206ENST00000556162 BLMP54132 1417 aaPredicted RBP19.16■□□□□ 0.66
SNX6-206ENST00000556162 COL5A2P05997 1499 aaPredicted RBP19.16■□□□□ 0.66
SNX6-206ENST00000556162 HSP90AB2PQ58FF8 381 aa19.16■□□□□ 0.66
SNX6-206ENST00000556162 LARP1Q6PKG0 1096 aaKnown RBP19.15■□□□□ 0.66
SNX6-206ENST00000556162 POTEAQ6S8J7 498 aa19.15■□□□□ 0.66
SNX6-206ENST00000556162 ANKRD24Q8TF21 1146 aa19.15■□□□□ 0.66
SNX6-206ENST00000556162 LTV1Q96GA3 475 aaPredicted RBP19.15■□□□□ 0.66
SNX6-206ENST00000556162 MAP2P11137 1827 aaKnown RBP19.15■□□□□ 0.66
SNX6-206ENST00000556162 MTHFSP49914 203 aa19.14■□□□□ 0.65
SNX6-206ENST00000556162 RALBP1Q15311 655 aa19.14■□□□□ 0.65
SNX6-206ENST00000556162 WDR17Q8IZU2 1322 aa19.14■□□□□ 0.65
SNX6-206ENST00000556162 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.65
SNX6-206ENST00000556162 GJD4Q96KN9 370 aaPredicted RBP19.14■□□□□ 0.65
SNX6-206ENST00000556162 ATRNO75882 1429 aa19.13■□□□□ 0.65
SNX6-206ENST00000556162 ERBB3P21860 1342 aa19.13■□□□□ 0.65
SNX6-206ENST00000556162 INSRP06213 1382 aa19.13■□□□□ 0.65
SNX6-206ENST00000556162 PARD3Q8TEW0 1356 aa19.12■□□□□ 0.65
SNX6-206ENST00000556162 RXRBP28702 533 aa19.12■□□□□ 0.65
SNX6-206ENST00000556162 PPP2R1AP30153 589 aa19.12■□□□□ 0.65
SNX6-206ENST00000556162 RBM6P78332 1123 aaKnown RBP19.12■□□□□ 0.65
SNX6-206ENST00000556162 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.12■□□□□ 0.65
SNX6-206ENST00000556162 NRAPQ86VF7 1730 aa19.11■□□□□ 0.65
SNX6-206ENST00000556162 SPATA31A5Q5VU36 1347 aa19.11■□□□□ 0.65
SNX6-206ENST00000556162 SPATA31A7Q8IWB4 1347 aa19.11■□□□□ 0.65
SNX6-206ENST00000556162 SMG6Q86US8 1419 aaKnown RBP19.11■□□□□ 0.65
SNX6-206ENST00000556162 USP35Q9P2H5 1018 aa19.11■□□□□ 0.65
SNX6-206ENST00000556162 RGPD5Q99666 1765 aa19.1■□□□□ 0.65
SNX6-206ENST00000556162 NLRP2Q9NX02 1062 aa19.1■□□□□ 0.65
SNX6-206ENST00000556162 PEAK1Q9H792 1746 aa19.1■□□□□ 0.65
SNX6-206ENST00000556162 CRB1P82279 1406 aa19.1■□□□□ 0.65
SNX6-206ENST00000556162 PRKRIP1Q9H875 184 aaPredicted RBP19.09■□□□□ 0.65
SNX6-206ENST00000556162 SPATA31A1Q5TZJ5 1347 aa19.09■□□□□ 0.65
SNX6-206ENST00000556162 CARD10Q9BWT7 1032 aa19.09■□□□□ 0.65
SNX6-206ENST00000556162 TCP11L2Q8N4U5 519 aa19.07■□□□□ 0.64
SNX6-206ENST00000556162 CDK12Q9NYV4 1490 aaPredicted RBP19.07■□□□□ 0.64
SNX6-206ENST00000556162 CFAP53Q96M91 514 aa19.07■□□□□ 0.64
SNX6-206ENST00000556162 THRAP3Q9Y2W1 955 aaKnown RBP19.07■□□□□ 0.64
SNX6-206ENST00000556162 ANP32CO43423 234 aa19.06■□□□□ 0.64
SNX6-206ENST00000556162 EIF4A2Q14240 407 aaKnown RBP19.06■□□□□ 0.64
SNX6-206ENST00000556162 MYBBP1AQ9BQG0 1328 aaKnown RBP19.05■□□□□ 0.64
SNX6-206ENST00000556162 FAM98CQ17RN3 349 aaKnown RBP19.05■□□□□ 0.64
SNX6-206ENST00000556162 NBPF6Q5VWK0 638 aa19.05■□□□□ 0.64
SNX6-206ENST00000556162 NBPF4Q96M43 638 aa19.05■□□□□ 0.64
SNX6-206ENST00000556162 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
SNX6-206ENST00000556162 ONECUT3O60422 494 aaPredicted RBP19.03■□□□□ 0.64
SNX6-206ENST00000556162 DIAPH1O60610 1272 aaKnown RBP19.03■□□□□ 0.64
SNX6-206ENST00000556162 GLI3P10071 1580 aa19.03■□□□□ 0.64
SNX6-206ENST00000556162 A0A0G2JS52 829 aa19.03■□□□□ 0.64
SNX6-206ENST00000556162 MYT1Q01538 1121 aa19.03■□□□□ 0.64
SNX6-206ENST00000556162 IL13P35225 146 aa19.02■□□□□ 0.64
SNX6-206ENST00000556162 EYA1Q99502 592 aa19.02■□□□□ 0.64
SNX6-206ENST00000556162 USHBP1Q8N6Y0 703 aa19.01■□□□□ 0.63
SNX6-206ENST00000556162 CDCA7Q9BWT1 371 aaPredicted RBP19.01■□□□□ 0.63
SNX6-206ENST00000556162 SEPT12Q8IYM1 358 aa19■□□□□ 0.63
SNX6-206ENST00000556162 FAM208AQ9UK61 1670 aaKnown RBP19■□□□□ 0.63
SNX6-206ENST00000556162 IL2RBP14784 551 aa18.99■□□□□ 0.63
SNX6-206ENST00000556162 NUDCQ9Y266 331 aa18.99■□□□□ 0.63
SNX6-206ENST00000556162 RAPGEF4Q8WZA2 1011 aa18.97■□□□□ 0.63
SNX6-206ENST00000556162 IGSF1Q8N6C5 1336 aa18.97■□□□□ 0.63
SNX6-206ENST00000556162 U2SURPO15042 1029 aaKnown RBP18.97■□□□□ 0.63
SNX6-206ENST00000556162 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
SNX6-206ENST00000556162 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
SNX6-206ENST00000556162 RGS12O14924 1447 aa18.95■□□□□ 0.62
SNX6-206ENST00000556162 RGPD2P0DJD1 1756 aa18.95■□□□□ 0.62
SNX6-206ENST00000556162 EXOC5O00471 708 aa18.94■□□□□ 0.62
SNX6-206ENST00000556162 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
SNX6-206ENST00000556162 DDB1Q16531 1140 aa18.94■□□□□ 0.62
SNX6-206ENST00000556162 SULT6B1Q6IMI4 303 aa18.94■□□□□ 0.62
SNX6-206ENST00000556162 DISP2A7MBM2 1401 aa18.93■□□□□ 0.62
SNX6-206ENST00000556162 PDE3BQ13370 1112 aa18.93■□□□□ 0.62
SNX6-206ENST00000556162 NCAPD2Q15021 1401 aa18.93■□□□□ 0.62
SNX6-206ENST00000556162 HMOX1P09601 288 aa18.92■□□□□ 0.62
SNX6-206ENST00000556162 U2AF1L5P0DN76 240 aaPredicted RBP18.92■□□□□ 0.62
SNX6-206ENST00000556162 U2AF1Q01081 240 aaKnown RBP eCLIP18.92■□□□□ 0.62
SNX6-206ENST00000556162 KRT27Q7Z3Y8 459 aa18.92■□□□□ 0.62
SNX6-206ENST00000556162 AEBP1Q8IUX7 1158 aa18.92■□□□□ 0.62
SNX6-206ENST00000556162 ILDR2Q71H61 639 aa18.91■□□□□ 0.62
SNX6-206ENST00000556162 THSD7AQ9UPZ6 1657 aa18.91■□□□□ 0.62
SNX6-206ENST00000556162 KDRP35968 1356 aa18.9■□□□□ 0.62
SNX6-206ENST00000556162 ZCRB1Q8TBF4 217 aaKnown RBP18.9■□□□□ 0.62
SNX6-206ENST00000556162 MEGF6O75095 1541 aa18.89■□□□□ 0.61
SNX6-206ENST00000556162 RGPD1P0DJD0 1748 aa18.88■□□□□ 0.61
SNX6-206ENST00000556162 OVOS2A0A0G2JMS6 1433 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms