RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 RGPD5Q99666 1765 aa39.14■■■■□ 3.86
PCNX1-206ENST00000554292 PANK3Q9H999 370 aa39.14■■■■□ 3.86
PCNX1-206ENST00000554292 SPATA31A5Q5VU36 1347 aa39.14■■■■□ 3.86
PCNX1-206ENST00000554292 SPATA31A7Q8IWB4 1347 aa39.14■■■■□ 3.86
PCNX1-206ENST00000554292 ZEB1P37275 1124 aaPredicted RBP39.13■■■■□ 3.85
PCNX1-206ENST00000554292 CCDC7Q96M83 1385 aa39.11■■■■□ 3.85
PCNX1-206ENST00000554292 ANKRD26Q9UPS8 1709 aa39.1■■■■□ 3.85
PCNX1-206ENST00000554292 SPATA31A1Q5TZJ5 1347 aa39.07■■■■□ 3.84
PCNX1-206ENST00000554292 LARP1Q6PKG0 1096 aaKnown RBP39.05■■■■□ 3.84
PCNX1-206ENST00000554292 AXIN2Q9Y2T1 843 aa39.05■■■■□ 3.84
PCNX1-206ENST00000554292 CRB1P82279 1406 aa39.05■■■■□ 3.84
PCNX1-206ENST00000554292 ONECUT3O60422 494 aaPredicted RBP39.04■■■■□ 3.84
PCNX1-206ENST00000554292 WASHC2AQ641Q2 1341 aa39.04■■■■□ 3.84
PCNX1-206ENST00000554292 NSD2O96028 1365 aa39.03■■■■□ 3.84
PCNX1-206ENST00000554292 WDR17Q8IZU2 1322 aa39.02■■■■□ 3.84
PCNX1-206ENST00000554292 BLMP54132 1417 aaPredicted RBP39.02■■■■□ 3.84
PCNX1-206ENST00000554292 FAM98CQ17RN3 349 aaKnown RBP39.01■■■■□ 3.84
PCNX1-206ENST00000554292 KNSTRNQ9Y448 316 aa39.01■■■■□ 3.84
PCNX1-206ENST00000554292 BRWD3Q6RI45 1802 aa39■■■■□ 3.83
PCNX1-206ENST00000554292 A0A0G2JS52 829 aa39■■■■□ 3.83
PCNX1-206ENST00000554292 MYT1Q01538 1121 aa39■■■■□ 3.83
PCNX1-206ENST00000554292 SEPT12Q8IYM1 358 aa39■■■■□ 3.83
PCNX1-206ENST00000554292 MAP3K19Q56UN5 1328 aa38.99■■■■□ 3.83
PCNX1-206ENST00000554292 CSB-PGBD3P0DP91 1061 aa38.99■■■■□ 3.83
PCNX1-206ENST00000554292 THSD7AQ9UPZ6 1657 aa38.99■■■■□ 3.83
PCNX1-206ENST00000554292 RTL1A6NKG5 1358 aa38.98■■■■□ 3.83
PCNX1-206ENST00000554292 TOM1L2Q6ZVM7 507 aa38.98■■■■□ 3.83
PCNX1-206ENST00000554292 USP35Q9P2H5 1018 aa38.98■■■■□ 3.83
PCNX1-206ENST00000554292 THRAP3Q9Y2W1 955 aaKnown RBP38.98■■■■□ 3.83
PCNX1-206ENST00000554292 TCP11L2Q8N4U5 519 aa38.97■■■■□ 3.83
PCNX1-206ENST00000554292 IP6K1Q92551 441 aa38.97■■■■□ 3.83
PCNX1-206ENST00000554292 AMPHP49418 695 aa38.96■■■■□ 3.83
PCNX1-206ENST00000554292 BARGINQ6ZT62 677 aa38.95■■■■□ 3.83
PCNX1-206ENST00000554292 FAM208AQ9UK61 1670 aaKnown RBP38.94■■■■□ 3.82
PCNX1-206ENST00000554292 ERBB3P21860 1342 aa38.93■■■■□ 3.82
PCNX1-206ENST00000554292 KIF24Q5T7B8 1368 aa38.93■■■■□ 3.82
PCNX1-206ENST00000554292 RRS1Q15050 365 aaKnown RBP38.91■■■■□ 3.82
PCNX1-206ENST00000554292 MAP2P11137 1827 aaKnown RBP38.91■■■■□ 3.82
PCNX1-206ENST00000554292 WNK3Q9BYP7 1800 aa38.91■■■■□ 3.82
PCNX1-206ENST00000554292 FBLN1P23142 703 aa38.9■■■■□ 3.82
PCNX1-206ENST00000554292 HOXC9P31274 260 aa38.9■■■■□ 3.82
PCNX1-206ENST00000554292 ANKRD24Q8TF21 1146 aa38.89■■■■□ 3.82
PCNX1-206ENST00000554292 CARD10Q9BWT7 1032 aa38.89■■■■□ 3.82
PCNX1-206ENST00000554292 FLT4P35916 1363 aa38.86■■■■□ 3.81
PCNX1-206ENST00000554292 KRT27Q7Z3Y8 459 aa38.86■■■■□ 3.81
PCNX1-206ENST00000554292 PARP4Q9UKK3 1724 aaKnown RBP38.86■■■■□ 3.81
PCNX1-206ENST00000554292 PEAK1Q9H792 1746 aa38.84■■■■□ 3.81
PCNX1-206ENST00000554292 NLRP2Q9NX02 1062 aa38.83■■■■□ 3.81
PCNX1-206ENST00000554292 SMG6Q86US8 1419 aaKnown RBP38.82■■■■□ 3.81
PCNX1-206ENST00000554292 AMER1Q5JTC6 1135 aaPredicted RBP38.82■■■■□ 3.8
PCNX1-206ENST00000554292 MORC1Q86VD1 984 aa38.82■■■■□ 3.8
PCNX1-206ENST00000554292 CDCA7Q9BWT1 371 aaPredicted RBP38.82■■■■□ 3.8
PCNX1-206ENST00000554292 PER1O15534 1290 aaPredicted RBP38.81■■■■□ 3.8
PCNX1-206ENST00000554292 INSRP06213 1382 aa38.8■■■■□ 3.8
PCNX1-206ENST00000554292 LTV1Q96GA3 475 aaPredicted RBP38.79■■■■□ 3.8
PCNX1-206ENST00000554292 TNNT2P45379 298 aaPredicted RBP38.78■■■■□ 3.8
PCNX1-206ENST00000554292 EMILIN1Q9Y6C2 1016 aa38.78■■■■□ 3.8
PCNX1-206ENST00000554292 UPF1Q92900 1129 aaKnown RBP eCLIP38.76■■■■□ 3.8
PCNX1-206ENST00000554292 NPC1L1Q9UHC9 1359 aa38.76■■■■□ 3.8
PCNX1-206ENST00000554292 LRRC37A3O60309 1634 aa38.75■■■■□ 3.79
PCNX1-206ENST00000554292 PPM1GO15355 546 aaPredicted RBP38.74■■■■□ 3.79
PCNX1-206ENST00000554292 RGPD2P0DJD1 1756 aa38.73■■■■□ 3.79
PCNX1-206ENST00000554292 PDE3BQ13370 1112 aa38.73■■■■□ 3.79
PCNX1-206ENST00000554292 POLKQ9UBT6 870 aa38.73■■■■□ 3.79
PCNX1-206ENST00000554292 DISP2A7MBM2 1401 aa38.72■■■■□ 3.79
PCNX1-206ENST00000554292 HSP90AB2PQ58FF8 381 aa38.72■■■■□ 3.79
PCNX1-206ENST00000554292 DDB1Q16531 1140 aa38.69■■■■□ 3.78
PCNX1-206ENST00000554292 CC2D1BQ5T0F9 858 aaKnown RBP38.67■■■■□ 3.78
PCNX1-206ENST00000554292 IL2RBP14784 551 aa38.66■■■■□ 3.78
PCNX1-206ENST00000554292 CCDC125Q86Z20 511 aa38.65■■■■□ 3.78
PCNX1-206ENST00000554292 EP400Q96L91 3159 aa38.64■■■■□ 3.78
PCNX1-206ENST00000554292 TNS2Q63HR2 1409 aa38.62■■■■□ 3.77
PCNX1-206ENST00000554292 FAM196AQ6ZSG2 479 aa38.61■■■■□ 3.77
PCNX1-206ENST00000554292 EXOC5O00471 708 aa38.6■■■■□ 3.77
PCNX1-206ENST00000554292 NBPF6Q5VWK0 638 aa38.59■■■■□ 3.77
PCNX1-206ENST00000554292 NBPF4Q96M43 638 aa38.59■■■■□ 3.77
PCNX1-206ENST00000554292 RGPD1P0DJD0 1748 aa38.58■■■■□ 3.77
PCNX1-206ENST00000554292 OVOS2A0A0G2JMS6 1433 aa38.58■■■■□ 3.77
PCNX1-206ENST00000554292 FAM182BQ5T319 152 aa38.58■■■■□ 3.77
PCNX1-206ENST00000554292 SF3B2Q13435 895 aaKnown RBP38.55■■■■□ 3.76
PCNX1-206ENST00000554292 CNGB1Q14028 1251 aaPredicted RBP38.53■■■■□ 3.76
PCNX1-206ENST00000554292 RAPGEF4Q8WZA2 1011 aa38.52■■■■□ 3.76
PCNX1-206ENST00000554292 USHBP1Q8N6Y0 703 aa38.51■■■■□ 3.76
PCNX1-206ENST00000554292 NCAPD2Q15021 1401 aa38.5■■■■□ 3.75
PCNX1-206ENST00000554292 EIF4A2Q14240 407 aaKnown RBP38.5■■■■□ 3.75
PCNX1-206ENST00000554292 MEGF6O75095 1541 aa38.48■■■■□ 3.75
PCNX1-206ENST00000554292 MARCH10Q8NA82 808 aaPredicted RBP38.47■■■■□ 3.75
PCNX1-206ENST00000554292 SBF2Q86WG5 1849 aa38.47■■■■□ 3.75
PCNX1-206ENST00000554292 BCL9O00512 1426 aa38.46■■■■□ 3.75
PCNX1-206ENST00000554292 TNS1Q9HBL0 1735 aaKnown RBP38.46■■■■□ 3.75
PCNX1-206ENST00000554292 TATP17735 454 aaPredicted RBP38.46■■■■□ 3.75
PCNX1-206ENST00000554292 MTHFSP49914 203 aa38.46■■■■□ 3.75
PCNX1-206ENST00000554292 EYA1Q99502 592 aa38.46■■■■□ 3.75
PCNX1-206ENST00000554292 DDX10Q13206 875 aaKnown RBP38.43■■■■□ 3.74
PCNX1-206ENST00000554292 SHANK3Q9BYB0 1731 aa38.41■■■■□ 3.74
PCNX1-206ENST00000554292 IGSF1Q8N6C5 1336 aa38.4■■■■□ 3.74
PCNX1-206ENST00000554292 TRIM37O94972 964 aa38.4■■■■□ 3.74
PCNX1-206ENST00000554292 ZCRB1Q8TBF4 217 aaKnown RBP38.4■■■■□ 3.74
PCNX1-206ENST00000554292 BAG6P46379 1132 aa38.39■■■■□ 3.74
PCNX1-206ENST00000554292 PKD1L3Q7Z443 1732 aa38.38■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms