RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 PRR36Q9H6K5 1346 aa20.09■□□□□ 0.81
ABCD4-218ENST00000553486 SLFN5Q08AF3 891 aa20.09■□□□□ 0.81
ABCD4-218ENST00000553486 RUNDC1Q96C34 613 aa20.09■□□□□ 0.81
ABCD4-218ENST00000553486 CCDC136Q96JN2 1154 aa20.07■□□□□ 0.8
ABCD4-218ENST00000553486 VPS72Q15906 364 aa20.06■□□□□ 0.8
ABCD4-218ENST00000553486 TRMT2AQ8IZ69 625 aaKnown RBP20.06■□□□□ 0.8
ABCD4-218ENST00000553486 E9PSI1 815 aa20.06■□□□□ 0.8
ABCD4-218ENST00000553486 CCDC125Q86Z20 511 aa20.06■□□□□ 0.8
ABCD4-218ENST00000553486 ABCA3Q99758 1704 aa20.06■□□□□ 0.8
ABCD4-218ENST00000553486 PPIP5K1Q6PFW1 1433 aa20.05■□□□□ 0.8
ABCD4-218ENST00000553486 TRPM3Q9HCF6 1732 aaPredicted RBP20.05■□□□□ 0.8
ABCD4-218ENST00000553486 FAM83GA6ND36 823 aa20.04■□□□□ 0.8
ABCD4-218ENST00000553486 NUDT16Q96DE0 195 aaKnown RBP20.04■□□□□ 0.8
ABCD4-218ENST00000553486 CPSF1Q10570 1443 aaKnown RBP20.03■□□□□ 0.8
ABCD4-218ENST00000553486 PLCH1Q4KWH8 1693 aa20.03■□□□□ 0.8
ABCD4-218ENST00000553486 NWD2Q9ULI1 1742 aa20.03■□□□□ 0.8
ABCD4-218ENST00000553486 NCBP3Q53F19 620 aaKnown RBP20.03■□□□□ 0.8
ABCD4-218ENST00000553486 CCDC61Q9Y6R9 512 aa20.03■□□□□ 0.8
ABCD4-218ENST00000553486 NGDNQ8NEJ9 315 aaKnown RBP20.02■□□□□ 0.8
ABCD4-218ENST00000553486 EDC4Q6P2E9 1401 aaKnown RBP20.02■□□□□ 0.8
ABCD4-218ENST00000553486 U2AF1L5P0DN76 240 aaPredicted RBP20.02■□□□□ 0.79
ABCD4-218ENST00000553486 U2AF1Q01081 240 aaKnown RBP eCLIP20.02■□□□□ 0.79
ABCD4-218ENST00000553486 WWC1Q8IX03 1113 aa20.02■□□□□ 0.79
ABCD4-218ENST00000553486 SEPT12Q8IYM1 358 aa20.02■□□□□ 0.79
ABCD4-218ENST00000553486 CCDC9Q9Y3X0 531 aaKnown RBP20.02■□□□□ 0.79
ABCD4-218ENST00000553486 ALS2Q96Q42 1657 aa20.01■□□□□ 0.79
ABCD4-218ENST00000553486 ONECUT3O60422 494 aaPredicted RBP20.01■□□□□ 0.79
ABCD4-218ENST00000553486 TCP11L2Q8N4U5 519 aa20.01■□□□□ 0.79
ABCD4-218ENST00000553486 EXOC6Q8TAG9 804 aa20.01■□□□□ 0.79
ABCD4-218ENST00000553486 ITSN1Q15811 1721 aa20■□□□□ 0.79
ABCD4-218ENST00000553486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20■□□□□ 0.79
ABCD4-218ENST00000553486 AKAP12Q02952 1782 aa20■□□□□ 0.79
ABCD4-218ENST00000553486 COL3A1P02461 1466 aaPredicted RBP20■□□□□ 0.79
ABCD4-218ENST00000553486 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.99■□□□□ 0.79
ABCD4-218ENST00000553486 MON2Q7Z3U7 1717 aa19.99■□□□□ 0.79
ABCD4-218ENST00000553486 CCDC27Q2M243 656 aa19.99■□□□□ 0.79
ABCD4-218ENST00000553486 PAK3O75914 559 aaPredicted RBP19.98■□□□□ 0.79
ABCD4-218ENST00000553486 ZNF692Q9BU19 519 aaPredicted RBP19.98■□□□□ 0.79
ABCD4-218ENST00000553486 BTG4Q9NY30 223 aa19.98■□□□□ 0.79
ABCD4-218ENST00000553486 WDR63Q8IWG1 891 aa19.97■□□□□ 0.79
ABCD4-218ENST00000553486 SPINK5Q9NQ38 1064 aaPredicted RBP19.97■□□□□ 0.79
ABCD4-218ENST00000553486 ZRANB1Q9UGI0 708 aa19.97■□□□□ 0.79
ABCD4-218ENST00000553486 MAP2P11137 1827 aaKnown RBP19.97■□□□□ 0.79
ABCD4-218ENST00000553486 PLIN1O60240 522 aa19.97■□□□□ 0.79
ABCD4-218ENST00000553486 PNNQ9H307 717 aaKnown RBP19.96■□□□□ 0.79
ABCD4-218ENST00000553486 U2SURPO15042 1029 aaKnown RBP19.95■□□□□ 0.78
ABCD4-218ENST00000553486 DIAPH1O60610 1272 aaKnown RBP19.95■□□□□ 0.78
ABCD4-218ENST00000553486 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
ABCD4-218ENST00000553486 BRWD3Q6RI45 1802 aa19.95■□□□□ 0.78
ABCD4-218ENST00000553486 KRT27Q7Z3Y8 459 aa19.95■□□□□ 0.78
ABCD4-218ENST00000553486 NRAPQ86VF7 1730 aa19.94■□□□□ 0.78
ABCD4-218ENST00000553486 RRP7AQ9Y3A4 280 aaKnown RBP19.94■□□□□ 0.78
ABCD4-218ENST00000553486 COL14A1Q05707 1796 aaKnown RBP19.94■□□□□ 0.78
ABCD4-218ENST00000553486 RBM19Q9Y4C8 960 aaKnown RBP19.93■□□□□ 0.78
ABCD4-218ENST00000553486 TOPAZ1Q8N9V7 1692 aa19.93■□□□□ 0.78
ABCD4-218ENST00000553486 FAM98CQ17RN3 349 aaKnown RBP19.92■□□□□ 0.78
ABCD4-218ENST00000553486 PRDM11Q9NQV5 511 aa19.92■□□□□ 0.78
ABCD4-218ENST00000553486 CRYBG1Q9Y4K1 1723 aa19.92■□□□□ 0.78
ABCD4-218ENST00000553486 A0A0G2JS52 829 aa19.92■□□□□ 0.78
ABCD4-218ENST00000553486 MYT1Q01538 1121 aa19.92■□□□□ 0.78
ABCD4-218ENST00000553486 CRBNQ96SW2 442 aa19.92■□□□□ 0.78
ABCD4-218ENST00000553486 POLKQ9UBT6 870 aa19.92■□□□□ 0.78
ABCD4-218ENST00000553486 COG3Q96JB2 828 aa19.91■□□□□ 0.78
ABCD4-218ENST00000553486 PLEKHF1Q96S99 279 aa19.91■□□□□ 0.78
ABCD4-218ENST00000553486 MAPK8IP3Q9UPT6 1336 aa19.91■□□□□ 0.78
ABCD4-218ENST00000553486 SF3B2Q13435 895 aaKnown RBP19.9■□□□□ 0.78
ABCD4-218ENST00000553486 NME9Q86XW9 330 aa19.9■□□□□ 0.78
ABCD4-218ENST00000553486 AATKQ6ZMQ8 1374 aa19.9■□□□□ 0.78
ABCD4-218ENST00000553486 ACEP12821 1306 aa19.9■□□□□ 0.78
ABCD4-218ENST00000553486 SPATA31A5Q5VU36 1347 aa19.9■□□□□ 0.78
ABCD4-218ENST00000553486 SPATA31A7Q8IWB4 1347 aa19.9■□□□□ 0.78
ABCD4-218ENST00000553486 PLEKHG3A1L390 1219 aa19.9■□□□□ 0.78
ABCD4-218ENST00000553486 DEFB132Q7Z7B7 95 aa19.9■□□□□ 0.78
ABCD4-218ENST00000553486 KIAA0232Q92628 1395 aa19.89■□□□□ 0.77
ABCD4-218ENST00000553486 MYH16Q9H6N6 1097 aa19.88■□□□□ 0.77
ABCD4-218ENST00000553486 FCHSD2O94868 740 aa19.87■□□□□ 0.77
ABCD4-218ENST00000553486 NUTM2GQ5VZR2 741 aa19.87■□□□□ 0.77
ABCD4-218ENST00000553486 PPM1GO15355 546 aaPredicted RBP19.86■□□□□ 0.77
ABCD4-218ENST00000553486 TMPOP42166 694 aaKnown RBP19.86■□□□□ 0.77
ABCD4-218ENST00000553486 C20orf194Q5TEA3 1177 aa19.86■□□□□ 0.77
ABCD4-218ENST00000553486 NRKQ7Z2Y5 1582 aa19.85■□□□□ 0.77
ABCD4-218ENST00000553486 CHRNA2Q15822 529 aa19.85■□□□□ 0.77
ABCD4-218ENST00000553486 PHRF1Q9P1Y6 1649 aaKnown RBP19.84■□□□□ 0.77
ABCD4-218ENST00000553486 NEFMP07197 916 aa19.84■□□□□ 0.77
ABCD4-218ENST00000553486 ZC3H6P61129 1189 aaKnown RBP19.84■□□□□ 0.77
ABCD4-218ENST00000553486 TTC21BQ7Z4L5 1316 aa19.84■□□□□ 0.77
ABCD4-218ENST00000553486 FBLN1P23142 703 aa19.83■□□□□ 0.77
ABCD4-218ENST00000553486 ABTB2Q8N961 1025 aa19.83■□□□□ 0.77
ABCD4-218ENST00000553486 SPATA31A1Q5TZJ5 1347 aa19.83■□□□□ 0.77
ABCD4-218ENST00000553486 BCAR3O75815 825 aa19.83■□□□□ 0.76
ABCD4-218ENST00000553486 THSD7AQ9UPZ6 1657 aa19.83■□□□□ 0.76
ABCD4-218ENST00000553486 USP6P35125 1406 aa19.82■□□□□ 0.76
ABCD4-218ENST00000553486 EMILIN1Q9Y6C2 1016 aa19.82■□□□□ 0.76
ABCD4-218ENST00000553486 STRN4Q9NRL3 753 aa19.81■□□□□ 0.76
ABCD4-218ENST00000553486 BAG6P46379 1132 aa19.81■□□□□ 0.76
ABCD4-218ENST00000553486 FAM182BQ5T319 152 aa19.81■□□□□ 0.76
ABCD4-218ENST00000553486 USP19O94966 1318 aa19.81■□□□□ 0.76
ABCD4-218ENST00000553486 IL16Q14005 1332 aa19.81■□□□□ 0.76
ABCD4-218ENST00000553486 RIPK4P57078 832 aa19.8■□□□□ 0.76
ABCD4-218ENST00000553486 RSPH6AQ9H0K4 717 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms