RNA–Protein interactions for RNA: ENST00000552636.1

ATP2A2-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 4 BASIC

Gene ATP2A2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-211ENST00000552636 THRAP3Q9Y2W1 955 aaKnown RBP17.48■□□□□ 0.39
ATP2A2-211ENST00000552636 COL5A2P05997 1499 aaPredicted RBP17.48■□□□□ 0.39
ATP2A2-211ENST00000552636 GLI3P10071 1580 aa17.48■□□□□ 0.39
ATP2A2-211ENST00000552636 ZEB1P37275 1124 aaPredicted RBP17.47■□□□□ 0.39
ATP2A2-211ENST00000552636 LARP1Q6PKG0 1096 aaKnown RBP17.46■□□□□ 0.39
ATP2A2-211ENST00000552636 BARGINQ6ZT62 677 aa17.46■□□□□ 0.39
ATP2A2-211ENST00000552636 SEPT12Q8IYM1 358 aa17.46■□□□□ 0.39
ATP2A2-211ENST00000552636 AXIN2Q9Y2T1 843 aa17.46■□□□□ 0.39
ATP2A2-211ENST00000552636 WDR17Q8IZU2 1322 aa17.46■□□□□ 0.38
ATP2A2-211ENST00000552636 FAM98CQ17RN3 349 aaKnown RBP17.45■□□□□ 0.38
ATP2A2-211ENST00000552636 TCP11L2Q8N4U5 519 aa17.45■□□□□ 0.38
ATP2A2-211ENST00000552636 CRB1P82279 1406 aa17.45■□□□□ 0.38
ATP2A2-211ENST00000552636 NSD2O96028 1365 aa17.44■□□□□ 0.38
ATP2A2-211ENST00000552636 IP6K1Q92551 441 aa17.44■□□□□ 0.38
ATP2A2-211ENST00000552636 KNSTRNQ9Y448 316 aa17.44■□□□□ 0.38
ATP2A2-211ENST00000552636 BLMP54132 1417 aaPredicted RBP17.44■□□□□ 0.38
ATP2A2-211ENST00000552636 CCDC7Q96M83 1385 aa17.43■□□□□ 0.38
ATP2A2-211ENST00000552636 A0A0G2JS52 829 aa17.43■□□□□ 0.38
ATP2A2-211ENST00000552636 CSB-PGBD3P0DP91 1061 aa17.43■□□□□ 0.38
ATP2A2-211ENST00000552636 MYT1Q01538 1121 aa17.43■□□□□ 0.38
ATP2A2-211ENST00000552636 TOM1L2Q6ZVM7 507 aa17.43■□□□□ 0.38
ATP2A2-211ENST00000552636 COL18A1P39060 1754 aa17.43■□□□□ 0.38
ATP2A2-211ENST00000552636 RTL1A6NKG5 1358 aa17.42■□□□□ 0.38
ATP2A2-211ENST00000552636 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
ATP2A2-211ENST00000552636 AMPHP49418 695 aa17.42■□□□□ 0.38
ATP2A2-211ENST00000552636 CARD10Q9BWT7 1032 aa17.42■□□□□ 0.38
ATP2A2-211ENST00000552636 MAP3K19Q56UN5 1328 aa17.42■□□□□ 0.38
ATP2A2-211ENST00000552636 KRT27Q7Z3Y8 459 aa17.41■□□□□ 0.38
ATP2A2-211ENST00000552636 CDCA7Q9BWT1 371 aaPredicted RBP17.41■□□□□ 0.38
ATP2A2-211ENST00000552636 USP35Q9P2H5 1018 aa17.41■□□□□ 0.38
ATP2A2-211ENST00000552636 ERBB3P21860 1342 aa17.41■□□□□ 0.38
ATP2A2-211ENST00000552636 WASHC2AQ641Q2 1341 aa17.41■□□□□ 0.38
ATP2A2-211ENST00000552636 HOXC9P31274 260 aa17.39■□□□□ 0.37
ATP2A2-211ENST00000552636 ANKRD24Q8TF21 1146 aa17.39■□□□□ 0.37
ATP2A2-211ENST00000552636 KIF20BQ96Q89 1820 aa17.39■□□□□ 0.37
ATP2A2-211ENST00000552636 UPF1Q92900 1129 aaKnown RBP eCLIP17.38■□□□□ 0.37
ATP2A2-211ENST00000552636 RRS1Q15050 365 aaKnown RBP17.37■□□□□ 0.37
ATP2A2-211ENST00000552636 CCDC125Q86Z20 511 aa17.37■□□□□ 0.37
ATP2A2-211ENST00000552636 FLT4P35916 1363 aa17.37■□□□□ 0.37
ATP2A2-211ENST00000552636 LTN1O94822 1766 aa17.35■□□□□ 0.37
ATP2A2-211ENST00000552636 FBLN1P23142 703 aa17.35■□□□□ 0.37
ATP2A2-211ENST00000552636 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
ATP2A2-211ENST00000552636 AMER1Q5JTC6 1135 aaPredicted RBP17.35■□□□□ 0.37
ATP2A2-211ENST00000552636 NLRP2Q9NX02 1062 aa17.35■□□□□ 0.37
ATP2A2-211ENST00000552636 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
ATP2A2-211ENST00000552636 THSD7AQ9UPZ6 1657 aa17.35■□□□□ 0.37
ATP2A2-211ENST00000552636 PER1O15534 1290 aaPredicted RBP17.34■□□□□ 0.37
ATP2A2-211ENST00000552636 INSRP06213 1382 aa17.34■□□□□ 0.37
ATP2A2-211ENST00000552636 MORC1Q86VD1 984 aa17.34■□□□□ 0.37
ATP2A2-211ENST00000552636 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
ATP2A2-211ENST00000552636 DDB1Q16531 1140 aa17.31■□□□□ 0.36
ATP2A2-211ENST00000552636 FAM196AQ6ZSG2 479 aa17.31■□□□□ 0.36
ATP2A2-211ENST00000552636 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
ATP2A2-211ENST00000552636 POLKQ9UBT6 870 aa17.31■□□□□ 0.36
ATP2A2-211ENST00000552636 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
ATP2A2-211ENST00000552636 EP400Q96L91 3159 aa17.3■□□□□ 0.36
ATP2A2-211ENST00000552636 IL2RBP14784 551 aa17.3■□□□□ 0.36
ATP2A2-211ENST00000552636 HSP90AB2PQ58FF8 381 aa17.3■□□□□ 0.36
ATP2A2-211ENST00000552636 RGPD5Q99666 1765 aa17.3■□□□□ 0.36
ATP2A2-211ENST00000552636 DISP2A7MBM2 1401 aa17.3■□□□□ 0.36
ATP2A2-211ENST00000552636 EXOC5O00471 708 aa17.29■□□□□ 0.36
ATP2A2-211ENST00000552636 PPM1GO15355 546 aaPredicted RBP17.29■□□□□ 0.36
ATP2A2-211ENST00000552636 TNNT2P45379 298 aaPredicted RBP17.29■□□□□ 0.36
ATP2A2-211ENST00000552636 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
ATP2A2-211ENST00000552636 ANKRD26Q9UPS8 1709 aa17.29■□□□□ 0.36
ATP2A2-211ENST00000552636 FAM208AQ9UK61 1670 aaKnown RBP17.28■□□□□ 0.36
ATP2A2-211ENST00000552636 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
ATP2A2-211ENST00000552636 PARP4Q9UKK3 1724 aaKnown RBP17.27■□□□□ 0.36
ATP2A2-211ENST00000552636 OVOS2A0A0G2JMS6 1433 aa17.25■□□□□ 0.35
ATP2A2-211ENST00000552636 TNS2Q63HR2 1409 aa17.24■□□□□ 0.35
ATP2A2-211ENST00000552636 CC2D1BQ5T0F9 858 aaKnown RBP17.24■□□□□ 0.35
ATP2A2-211ENST00000552636 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
ATP2A2-211ENST00000552636 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
ATP2A2-211ENST00000552636 BCL9O00512 1426 aa17.23■□□□□ 0.35
ATP2A2-211ENST00000552636 RAPGEF4Q8WZA2 1011 aa17.23■□□□□ 0.35
ATP2A2-211ENST00000552636 PEAK1Q9H792 1746 aa17.23■□□□□ 0.35
ATP2A2-211ENST00000552636 FAM182BQ5T319 152 aa17.22■□□□□ 0.35
ATP2A2-211ENST00000552636 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
ATP2A2-211ENST00000552636 MARCH10Q8NA82 808 aaPredicted RBP17.21■□□□□ 0.35
ATP2A2-211ENST00000552636 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
ATP2A2-211ENST00000552636 WNK3Q9BYP7 1800 aa17.2■□□□□ 0.34
ATP2A2-211ENST00000552636 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
ATP2A2-211ENST00000552636 BAG6P46379 1132 aa17.2■□□□□ 0.34
ATP2A2-211ENST00000552636 EIF4A2Q14240 407 aaKnown RBP17.2■□□□□ 0.34
ATP2A2-211ENST00000552636 PLEKHG2Q9H7P9 1386 aa17.19■□□□□ 0.34
ATP2A2-211ENST00000552636 NCAPD2Q15021 1401 aa17.19■□□□□ 0.34
ATP2A2-211ENST00000552636 TRIM37O94972 964 aa17.18■□□□□ 0.34
ATP2A2-211ENST00000552636 MTHFSP49914 203 aa17.18■□□□□ 0.34
ATP2A2-211ENST00000552636 ZCRB1Q8TBF4 217 aaKnown RBP17.18■□□□□ 0.34
ATP2A2-211ENST00000552636 EYA1Q99502 592 aa17.18■□□□□ 0.34
ATP2A2-211ENST00000552636 USHBP1Q8N6Y0 703 aa17.17■□□□□ 0.34
ATP2A2-211ENST00000552636 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
ATP2A2-211ENST00000552636 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.348e-8■□□□□ 10.9
ATP2A2-211ENST00000552636 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
ATP2A2-211ENST00000552636 MEGF6O75095 1541 aa17.16■□□□□ 0.34
ATP2A2-211ENST00000552636 PARD3Q8TEW0 1356 aa17.15■□□□□ 0.34
ATP2A2-211ENST00000552636 RGPD1P0DJD0 1748 aa17.14■□□□□ 0.33
ATP2A2-211ENST00000552636 APBA3O96018 575 aa17.14■□□□□ 0.33
ATP2A2-211ENST00000552636 DDX54Q8TDD1 881 aaKnown RBP17.14■□□□□ 0.33
ATP2A2-211ENST00000552636 SPG7Q9UQ90 795 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms