RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 CCDC146Q8IYE0 955 aa11.62□□□□□ -0.55
AC055716.2-201ENST00000552545 SHPRHQ149N8 1683 aa11.62□□□□□ -0.55
AC055716.2-201ENST00000552545 NFAT5O94916 1531 aa11.62□□□□□ -0.55
AC055716.2-201ENST00000552545 CDK12Q9NYV4 1490 aaPredicted RBP11.62□□□□□ -0.55
AC055716.2-201ENST00000552545 EIF5BO60841 1220 aaKnown RBP11.61□□□□□ -0.55
AC055716.2-201ENST00000552545 FLT4P35916 1363 aa11.61□□□□□ -0.55
AC055716.2-201ENST00000552545 CHRNA2Q15822 529 aa11.61□□□□□ -0.55
AC055716.2-201ENST00000552545 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
AC055716.2-201ENST00000552545 SMG6Q86US8 1419 aaKnown RBP11.61□□□□□ -0.55
AC055716.2-201ENST00000552545 NUTM2BA6NNL0 878 aaPredicted RBP11.6□□□□□ -0.55
AC055716.2-201ENST00000552545 NUTM2EB1AL46 878 aaPredicted RBP11.6□□□□□ -0.55
AC055716.2-201ENST00000552545 EIF4A2Q14240 407 aaKnown RBP11.6□□□□□ -0.55
AC055716.2-201ENST00000552545 ARHGEF25Q86VW2 580 aa11.6□□□□□ -0.55
AC055716.2-201ENST00000552545 NUTM2AQ8IVF1 878 aaPredicted RBP11.6□□□□□ -0.55
AC055716.2-201ENST00000552545 PNPLA6Q8IY17 1366 aa11.6□□□□□ -0.55
AC055716.2-201ENST00000552545 RGPD5Q99666 1765 aa11.6□□□□□ -0.55
AC055716.2-201ENST00000552545 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
AC055716.2-201ENST00000552545 COL3A1P02461 1466 aaPredicted RBP11.6□□□□□ -0.55
AC055716.2-201ENST00000552545 CRYBG1Q9Y4K1 1723 aa11.6□□□□□ -0.55
AC055716.2-201ENST00000552545 HMOX1P09601 288 aa11.59□□□□□ -0.55
AC055716.2-201ENST00000552545 IL13P35225 146 aa11.59□□□□□ -0.55
AC055716.2-201ENST00000552545 IP6K1Q92551 441 aa11.59□□□□□ -0.55
AC055716.2-201ENST00000552545 PRDM11Q9NQV5 511 aa11.59□□□□□ -0.55
AC055716.2-201ENST00000552545 KIAA0232Q92628 1395 aa11.59□□□□□ -0.55
AC055716.2-201ENST00000552545 ARXQ96QS3 562 aa11.59□□□□□ -0.55
AC055716.2-201ENST00000552545 ABCA3Q99758 1704 aa11.58□□□□□ -0.56
AC055716.2-201ENST00000552545 INSRP06213 1382 aa11.58□□□□□ -0.56
AC055716.2-201ENST00000552545 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
AC055716.2-201ENST00000552545 ADAMTS2O95450 1211 aa11.57□□□□□ -0.56
AC055716.2-201ENST00000552545 HSPA1LP34931 641 aa11.57□□□□□ -0.56
AC055716.2-201ENST00000552545 RTL1A6NKG5 1358 aa11.57□□□□□ -0.56
AC055716.2-201ENST00000552545 KIF24Q5T7B8 1368 aa11.57□□□□□ -0.56
AC055716.2-201ENST00000552545 CSB-PGBD3P0DP91 1061 aa11.57□□□□□ -0.56
AC055716.2-201ENST00000552545 SULT6B1Q6IMI4 303 aa11.56□□□□□ -0.56
AC055716.2-201ENST00000552545 ANKRD24Q8TF21 1146 aa11.56□□□□□ -0.56
AC055716.2-201ENST00000552545 RGPD2P0DJD1 1756 aa11.56□□□□□ -0.56
AC055716.2-201ENST00000552545 NEUROD2Q15784 382 aa11.56□□□□□ -0.56
AC055716.2-201ENST00000552545 USHBP1Q8N6Y0 703 aa11.56□□□□□ -0.56
AC055716.2-201ENST00000552545 NEFMP07197 916 aa11.55□□□□□ -0.56
AC055716.2-201ENST00000552545 EYA1Q99502 592 aa11.55□□□□□ -0.56
AC055716.2-201ENST00000552545 COL22A1Q8NFW1 1626 aaPredicted RBP11.55□□□□□ -0.56
AC055716.2-201ENST00000552545 APAF1O14727 1248 aa11.55□□□□□ -0.56
AC055716.2-201ENST00000552545 PRKAR2BP31323 418 aa11.55□□□□□ -0.56
AC055716.2-201ENST00000552545 AEBP1Q8IUX7 1158 aa11.55□□□□□ -0.56
AC055716.2-201ENST00000552545 RUNDC1Q96C34 613 aa11.55□□□□□ -0.56
AC055716.2-201ENST00000552545 MAPK8IP3Q9UPT6 1336 aa11.55□□□□□ -0.56
AC055716.2-201ENST00000552545 FAM83GA6ND36 823 aa11.54□□□□□ -0.56
AC055716.2-201ENST00000552545 FCHSD2O94868 740 aa11.54□□□□□ -0.56
AC055716.2-201ENST00000552545 PNNQ9H307 717 aaKnown RBP11.54□□□□□ -0.56
AC055716.2-201ENST00000552545 RRP7AQ9Y3A4 280 aaKnown RBP11.54□□□□□ -0.56
AC055716.2-201ENST00000552545 EVA1CP58658 441 aa11.54□□□□□ -0.56
AC055716.2-201ENST00000552545 STRN4Q9NRL3 753 aa11.54□□□□□ -0.56
AC055716.2-201ENST00000552545 NLRP2Q9NX02 1062 aa11.54□□□□□ -0.56
AC055716.2-201ENST00000552545 CPDO75976 1380 aa11.54□□□□□ -0.56
AC055716.2-201ENST00000552545 JCADQ9P266 1359 aa11.54□□□□□ -0.56
AC055716.2-201ENST00000552545 BLMP54132 1417 aaPredicted RBP11.53□□□□□ -0.56
AC055716.2-201ENST00000552545 COL18A1P39060 1754 aa11.53□□□□□ -0.56
AC055716.2-201ENST00000552545 NBPF6Q5VWK0 638 aa11.53□□□□□ -0.56
AC055716.2-201ENST00000552545 NBPF4Q96M43 638 aa11.53□□□□□ -0.56
AC055716.2-201ENST00000552545 RSPH6AQ9H0K4 717 aa11.52□□□□□ -0.56
AC055716.2-201ENST00000552545 TCP11L2Q8N4U5 519 aa11.52□□□□□ -0.57
AC055716.2-201ENST00000552545 BTG4Q9NY30 223 aa11.52□□□□□ -0.57
AC055716.2-201ENST00000552545 ERBB3P21860 1342 aa11.52□□□□□ -0.57
AC055716.2-201ENST00000552545 TOM1L2Q6ZVM7 507 aa11.51□□□□□ -0.57
AC055716.2-201ENST00000552545 PHACTR3Q96KR7 559 aa11.51□□□□□ -0.57
AC055716.2-201ENST00000552545 PLEKHF1Q96S99 279 aa11.51□□□□□ -0.57
AC055716.2-201ENST00000552545 RGPD1P0DJD0 1748 aa11.51□□□□□ -0.57
AC055716.2-201ENST00000552545 CAMTA1Q9Y6Y1 1673 aa11.51□□□□□ -0.57
AC055716.2-201ENST00000552545 IGSF1Q8N6C5 1336 aa11.5□□□□□ -0.57
AC055716.2-201ENST00000552545 CENPBP07199 599 aaPredicted RBP11.5□□□□□ -0.57
AC055716.2-201ENST00000552545 USP35Q9P2H5 1018 aa11.5□□□□□ -0.57
AC055716.2-201ENST00000552545 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
AC055716.2-201ENST00000552545 C8orf37Q96NL8 207 aa11.49□□□□□ -0.57
AC055716.2-201ENST00000552545 ZBED9Q6R2W3 1325 aa11.49□□□□□ -0.57
AC055716.2-201ENST00000552545 COL14A1Q05707 1796 aaKnown RBP11.49□□□□□ -0.57
AC055716.2-201ENST00000552545 RIPK4P57078 832 aa11.48□□□□□ -0.57
AC055716.2-201ENST00000552545 LARP1Q6PKG0 1096 aaKnown RBP11.48□□□□□ -0.57
AC055716.2-201ENST00000552545 NGLY1Q96IV0 654 aa11.48□□□□□ -0.57
AC055716.2-201ENST00000552545 LMO7Q8WWI1 1683 aa11.48□□□□□ -0.57
AC055716.2-201ENST00000552545 TMPOP42166 694 aaKnown RBP11.48□□□□□ -0.57
AC055716.2-201ENST00000552545 SPATA31A6Q5VVP1 1343 aa11.47□□□□□ -0.57
AC055716.2-201ENST00000552545 ABCC6O95255 1503 aa11.47□□□□□ -0.57
AC055716.2-201ENST00000552545 COL5A2P05997 1499 aaPredicted RBP11.47□□□□□ -0.57
AC055716.2-201ENST00000552545 WDR17Q8IZU2 1322 aa11.47□□□□□ -0.57
AC055716.2-201ENST00000552545 PLCH1Q4KWH8 1693 aa11.47□□□□□ -0.57
AC055716.2-201ENST00000552545 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.57
AC055716.2-201ENST00000552545 RAPGEF4Q8WZA2 1011 aa11.46□□□□□ -0.57
AC055716.2-201ENST00000552545 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
AC055716.2-201ENST00000552545 DLG5Q8TDM6 1919 aa11.46□□□□□ -0.57
AC055716.2-201ENST00000552545 KDRP35968 1356 aa11.46□□□□□ -0.58
AC055716.2-201ENST00000552545 NFE2L2Q16236 605 aa11.46□□□□□ -0.58
AC055716.2-201ENST00000552545 MTHFSDQ2M296 383 aaKnown RBP11.45□□□□□ -0.58
AC055716.2-201ENST00000552545 LRP6O75581 1613 aa11.44□□□□□ -0.58
AC055716.2-201ENST00000552545 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
AC055716.2-201ENST00000552545 WWC1Q8IX03 1113 aa11.44□□□□□ -0.58
AC055716.2-201ENST00000552545 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
AC055716.2-201ENST00000552545 FBXO41Q8TF61 875 aa11.44□□□□□ -0.58
AC055716.2-201ENST00000552545 PLEKHO1Q53GL0 409 aaPredicted RBP11.43□□□□□ -0.58
AC055716.2-201ENST00000552545 GAS2L2Q8NHY3 880 aa11.43□□□□□ -0.58
AC055716.2-201ENST00000552545 CARD10Q9BWT7 1032 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms