RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 SPATA31A5Q5VU36 1347 aa24■■□□□ 1.43
CDK4-207ENST00000550419 SPATA31A7Q8IWB4 1347 aa24■■□□□ 1.43
CDK4-207ENST00000550419 ONECUT3O60422 494 aaPredicted RBP23.99■■□□□ 1.43
CDK4-207ENST00000550419 EVA1CP58658 441 aa23.99■■□□□ 1.43
CDK4-207ENST00000550419 AXIN2Q9Y2T1 843 aa23.99■■□□□ 1.43
CDK4-207ENST00000550419 LTN1O94822 1766 aa23.98■■□□□ 1.43
CDK4-207ENST00000550419 ZBTB7CA1YPR0 619 aa23.98■■□□□ 1.43
CDK4-207ENST00000550419 PER1O15534 1290 aaPredicted RBP23.98■■□□□ 1.43
CDK4-207ENST00000550419 RGS12O14924 1447 aa23.97■■□□□ 1.43
CDK4-207ENST00000550419 STRN4Q9NRL3 753 aa23.97■■□□□ 1.43
CDK4-207ENST00000550419 CCDC9Q9Y3X0 531 aaKnown RBP23.97■■□□□ 1.43
CDK4-207ENST00000550419 ANKRD26Q9UPS8 1709 aa23.96■■□□□ 1.43
CDK4-207ENST00000550419 BLMP54132 1417 aaPredicted RBP23.96■■□□□ 1.43
CDK4-207ENST00000550419 KIF24Q5T7B8 1368 aa23.96■■□□□ 1.43
CDK4-207ENST00000550419 MAP3K19Q56UN5 1328 aa23.96■■□□□ 1.43
CDK4-207ENST00000550419 SPATA31A1Q5TZJ5 1347 aa23.96■■□□□ 1.43
CDK4-207ENST00000550419 RTL1A6NKG5 1358 aa23.95■■□□□ 1.42
CDK4-207ENST00000550419 WDR17Q8IZU2 1322 aa23.95■■□□□ 1.42
CDK4-207ENST00000550419 IP6K1Q92551 441 aa23.95■■□□□ 1.42
CDK4-207ENST00000550419 CRB1P82279 1406 aa23.94■■□□□ 1.42
CDK4-207ENST00000550419 AMER1Q5JTC6 1135 aaPredicted RBP23.94■■□□□ 1.42
CDK4-207ENST00000550419 LARP1Q6PKG0 1096 aaKnown RBP23.94■■□□□ 1.42
CDK4-207ENST00000550419 NPC1L1Q9UHC9 1359 aa23.92■■□□□ 1.42
CDK4-207ENST00000550419 THRAP3Q9Y2W1 955 aaKnown RBP23.92■■□□□ 1.42
CDK4-207ENST00000550419 ERBB3P21860 1342 aa23.91■■□□□ 1.42
CDK4-207ENST00000550419 FBLN1P23142 703 aa23.91■■□□□ 1.42
CDK4-207ENST00000550419 BARGINQ6ZT62 677 aa23.91■■□□□ 1.42
CDK4-207ENST00000550419 HOXC9P31274 260 aa23.9■■□□□ 1.42
CDK4-207ENST00000550419 AMPHP49418 695 aa23.9■■□□□ 1.42
CDK4-207ENST00000550419 RGPD5Q99666 1765 aa23.9■■□□□ 1.42
CDK4-207ENST00000550419 RRS1Q15050 365 aaKnown RBP23.89■■□□□ 1.41
CDK4-207ENST00000550419 TCP11L2Q8N4U5 519 aa23.89■■□□□ 1.41
CDK4-207ENST00000550419 FAM98CQ17RN3 349 aaKnown RBP23.88■■□□□ 1.41
CDK4-207ENST00000550419 TOM1L2Q6ZVM7 507 aa23.88■■□□□ 1.41
CDK4-207ENST00000550419 CARD10Q9BWT7 1032 aa23.88■■□□□ 1.41
CDK4-207ENST00000550419 FLT4P35916 1363 aa23.88■■□□□ 1.41
CDK4-207ENST00000550419 THSD7AQ9UPZ6 1657 aa23.87■■□□□ 1.41
CDK4-207ENST00000550419 SEPT12Q8IYM1 358 aa23.87■■□□□ 1.41
CDK4-207ENST00000550419 ANKRD24Q8TF21 1146 aa23.87■■□□□ 1.41
CDK4-207ENST00000550419 CSB-PGBD3P0DP91 1061 aa23.86■■□□□ 1.41
CDK4-207ENST00000550419 MORC1Q86VD1 984 aa23.86■■□□□ 1.41
CDK4-207ENST00000550419 INSRP06213 1382 aa23.86■■□□□ 1.41
CDK4-207ENST00000550419 POLKQ9UBT6 870 aa23.85■■□□□ 1.41
CDK4-207ENST00000550419 FAM208AQ9UK61 1670 aaKnown RBP23.84■■□□□ 1.41
CDK4-207ENST00000550419 USP35Q9P2H5 1018 aa23.84■■□□□ 1.41
CDK4-207ENST00000550419 EMILIN1Q9Y6C2 1016 aa23.84■■□□□ 1.41
CDK4-207ENST00000550419 PEAK1Q9H792 1746 aa23.84■■□□□ 1.41
CDK4-207ENST00000550419 SMG6Q86US8 1419 aaKnown RBP23.83■■□□□ 1.4
CDK4-207ENST00000550419 CDCA7Q9BWT1 371 aaPredicted RBP23.82■■□□□ 1.4
CDK4-207ENST00000550419 MAP2P11137 1827 aaKnown RBP23.8■■□□□ 1.4
CDK4-207ENST00000550419 TNNT2P45379 298 aaPredicted RBP23.8■■□□□ 1.4
CDK4-207ENST00000550419 HSP90AB2PQ58FF8 381 aa23.8■■□□□ 1.4
CDK4-207ENST00000550419 NLRP2Q9NX02 1062 aa23.8■■□□□ 1.4
CDK4-207ENST00000550419 DISP2A7MBM2 1401 aa23.78■■□□□ 1.4
CDK4-207ENST00000550419 A0A0G2JS52 829 aa23.78■■□□□ 1.4
CDK4-207ENST00000550419 MYT1Q01538 1121 aa23.78■■□□□ 1.4
CDK4-207ENST00000550419 CC2D1BQ5T0F9 858 aaKnown RBP23.78■■□□□ 1.4
CDK4-207ENST00000550419 KRT27Q7Z3Y8 459 aa23.78■■□□□ 1.4
CDK4-207ENST00000550419 PARP4Q9UKK3 1724 aaKnown RBP23.78■■□□□ 1.4
CDK4-207ENST00000550419 BRWD3Q6RI45 1802 aa23.77■■□□□ 1.4
CDK4-207ENST00000550419 PPM1GO15355 546 aaPredicted RBP23.76■■□□□ 1.39
CDK4-207ENST00000550419 LTV1Q96GA3 475 aaPredicted RBP23.76■■□□□ 1.39
CDK4-207ENST00000550419 WNK3Q9BYP7 1800 aa23.75■■□□□ 1.39
CDK4-207ENST00000550419 IL2RBP14784 551 aa23.71■■□□□ 1.39
CDK4-207ENST00000550419 DDB1Q16531 1140 aa23.71■■□□□ 1.39
CDK4-207ENST00000550419 NBPF6Q5VWK0 638 aa23.71■■□□□ 1.39
CDK4-207ENST00000550419 NBPF4Q96M43 638 aa23.71■■□□□ 1.39
CDK4-207ENST00000550419 LRRC37A3O60309 1634 aa23.7■■□□□ 1.39
CDK4-207ENST00000550419 NCAPD2Q15021 1401 aa23.7■■□□□ 1.38
CDK4-207ENST00000550419 DDX10Q13206 875 aaKnown RBP23.7■■□□□ 1.38
CDK4-207ENST00000550419 PDE3BQ13370 1112 aa23.7■■□□□ 1.38
CDK4-207ENST00000550419 UPF1Q92900 1129 aaKnown RBP eCLIP23.69■■□□□ 1.38
CDK4-207ENST00000550419 MTHFSP49914 203 aa23.68■■□□□ 1.38
CDK4-207ENST00000550419 EP400Q96L91 3159 aa23.67■■□□□ 1.38
CDK4-207ENST00000550419 ZNF316A6NFI3 1004 aaPredicted RBP23.67■■□□□ 1.38
CDK4-207ENST00000550419 EXOC5O00471 708 aa23.67■■□□□ 1.38
CDK4-207ENST00000550419 EIF4A2Q14240 407 aaKnown RBP23.67■■□□□ 1.38
CDK4-207ENST00000550419 CCDC125Q86Z20 511 aa23.67■■□□□ 1.38
CDK4-207ENST00000550419 RGPD2P0DJD1 1756 aa23.67■■□□□ 1.38
CDK4-207ENST00000550419 TNS2Q63HR2 1409 aa23.67■■□□□ 1.38
CDK4-207ENST00000550419 FAM196AQ6ZSG2 479 aa23.65■■□□□ 1.38
CDK4-207ENST00000550419 EYA1Q99502 592 aa23.64■■□□□ 1.37
CDK4-207ENST00000550419 BCL9O00512 1426 aa23.64■■□□□ 1.37
CDK4-207ENST00000550419 PARD3Q8TEW0 1356 aa23.64■■□□□ 1.37
CDK4-207ENST00000550419 PLEKHG2Q9H7P9 1386 aa23.64■■□□□ 1.37
CDK4-207ENST00000550419 IGSF1Q8N6C5 1336 aa23.62■■□□□ 1.37
CDK4-207ENST00000550419 OVOS2A0A0G2JMS6 1433 aa23.62■■□□□ 1.37
CDK4-207ENST00000550419 RAPGEF4Q8WZA2 1011 aa23.62■■□□□ 1.37
CDK4-207ENST00000550419 MEGF6O75095 1541 aa23.61■■□□□ 1.37
CDK4-207ENST00000550419 CNGB1Q14028 1251 aaPredicted RBP23.61■■□□□ 1.37
CDK4-207ENST00000550419 USHBP1Q8N6Y0 703 aa23.61■■□□□ 1.37
CDK4-207ENST00000550419 PPP2R1AP30153 589 aa23.6■■□□□ 1.37
CDK4-207ENST00000550419 IL13P35225 146 aa23.6■■□□□ 1.37
CDK4-207ENST00000550419 FAM182BQ5T319 152 aa23.6■■□□□ 1.37
CDK4-207ENST00000550419 MARCH10Q8NA82 808 aaPredicted RBP23.6■■□□□ 1.37
CDK4-207ENST00000550419 TATP17735 454 aaPredicted RBP23.58■■□□□ 1.37
CDK4-207ENST00000550419 RALBP1Q15311 655 aa23.58■■□□□ 1.37
CDK4-207ENST00000550419 RGPD1P0DJD0 1748 aa23.58■■□□□ 1.37
CDK4-207ENST00000550419 COL3A1P02461 1466 aaPredicted RBP23.57■■□□□ 1.36
CDK4-207ENST00000550419 ZCRB1Q8TBF4 217 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms