RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 TRPC5Q9UL62 973 aaPredicted RBP17.63■□□□□ 0.41
TROAP-212ENST00000550346 MAP3K19Q56UN5 1328 aa17.63■□□□□ 0.41
TROAP-212ENST00000550346 ABCA3Q99758 1704 aa17.63■□□□□ 0.41
TROAP-212ENST00000550346 CRYBG1Q9Y4K1 1723 aa17.62■□□□□ 0.41
TROAP-212ENST00000550346 COL14A1Q05707 1796 aaKnown RBP17.62■□□□□ 0.41
TROAP-212ENST00000550346 MIER1Q8N108 512 aa17.62■□□□□ 0.41
TROAP-212ENST00000550346 POLKQ9UBT6 870 aa17.62■□□□□ 0.41
TROAP-212ENST00000550346 PARD3Q8TEW0 1356 aa17.62■□□□□ 0.41
TROAP-212ENST00000550346 LTV1Q96GA3 475 aaPredicted RBP17.61■□□□□ 0.41
TROAP-212ENST00000550346 AXIN2Q9Y2T1 843 aa17.61■□□□□ 0.41
TROAP-212ENST00000550346 HOXC9P31274 260 aa17.6■□□□□ 0.41
TROAP-212ENST00000550346 EMILIN1Q9Y6C2 1016 aa17.6■□□□□ 0.41
TROAP-212ENST00000550346 NFAT5O94916 1531 aa17.6■□□□□ 0.41
TROAP-212ENST00000550346 KIF24Q5T7B8 1368 aa17.59■□□□□ 0.41
TROAP-212ENST00000550346 MTHFSP49914 203 aa17.59■□□□□ 0.41
TROAP-212ENST00000550346 TOM1L2Q6ZVM7 507 aa17.59■□□□□ 0.41
TROAP-212ENST00000550346 LTN1O94822 1766 aa17.58■□□□□ 0.41
TROAP-212ENST00000550346 VPS72Q15906 364 aa17.58■□□□□ 0.4
TROAP-212ENST00000550346 ANKRD24Q8TF21 1146 aa17.58■□□□□ 0.4
TROAP-212ENST00000550346 CFAP53Q96M91 514 aa17.58■□□□□ 0.4
TROAP-212ENST00000550346 NLRP2Q9NX02 1062 aa17.58■□□□□ 0.4
TROAP-212ENST00000550346 FLT4P35916 1363 aa17.57■□□□□ 0.4
TROAP-212ENST00000550346 RXRBP28702 533 aa17.57■□□□□ 0.4
TROAP-212ENST00000550346 HSP90AB2PQ58FF8 381 aa17.57■□□□□ 0.4
TROAP-212ENST00000550346 SLIT2O94813 1529 aa17.57■□□□□ 0.4
TROAP-212ENST00000550346 RTL1A6NKG5 1358 aa17.56■□□□□ 0.4
TROAP-212ENST00000550346 PPP2R1AP30153 589 aa17.56■□□□□ 0.4
TROAP-212ENST00000550346 LARP1Q6PKG0 1096 aaKnown RBP17.56■□□□□ 0.4
TROAP-212ENST00000550346 GJD4Q96KN9 370 aaPredicted RBP17.56■□□□□ 0.4
TROAP-212ENST00000550346 USP35Q9P2H5 1018 aa17.56■□□□□ 0.4
TROAP-212ENST00000550346 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
TROAP-212ENST00000550346 NWD2Q9ULI1 1742 aa17.55■□□□□ 0.4
TROAP-212ENST00000550346 CAMTA1Q9Y6Y1 1673 aa17.55■□□□□ 0.4
TROAP-212ENST00000550346 RBM6P78332 1123 aaKnown RBP17.55■□□□□ 0.4
TROAP-212ENST00000550346 RGS17Q9UGC6 210 aaPredicted RBP17.55■□□□□ 0.4
TROAP-212ENST00000550346 RGPD5Q99666 1765 aa17.55■□□□□ 0.4
TROAP-212ENST00000550346 BLMP54132 1417 aaPredicted RBP17.55■□□□□ 0.4
TROAP-212ENST00000550346 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
TROAP-212ENST00000550346 INSRP06213 1382 aa17.54■□□□□ 0.4
TROAP-212ENST00000550346 WDR17Q8IZU2 1322 aa17.54■□□□□ 0.4
TROAP-212ENST00000550346 MYBBP1AQ9BQG0 1328 aaKnown RBP17.54■□□□□ 0.4
TROAP-212ENST00000550346 PLCH1Q4KWH8 1693 aa17.54■□□□□ 0.4
TROAP-212ENST00000550346 ABCC6O95255 1503 aa17.52■□□□□ 0.4
TROAP-212ENST00000550346 SPATA31A5Q5VU36 1347 aa17.52■□□□□ 0.4
TROAP-212ENST00000550346 SPATA31A7Q8IWB4 1347 aa17.52■□□□□ 0.4
TROAP-212ENST00000550346 A0A0G2JS52 829 aa17.52■□□□□ 0.4
TROAP-212ENST00000550346 MYT1Q01538 1121 aa17.52■□□□□ 0.4
TROAP-212ENST00000550346 POTEAQ6S8J7 498 aa17.52■□□□□ 0.4
TROAP-212ENST00000550346 TCP11L2Q8N4U5 519 aa17.52■□□□□ 0.4
TROAP-212ENST00000550346 CARD10Q9BWT7 1032 aa17.52■□□□□ 0.4
TROAP-212ENST00000550346 COL18A1P39060 1754 aa17.52■□□□□ 0.4
TROAP-212ENST00000550346 ERBB3P21860 1342 aa17.51■□□□□ 0.39
TROAP-212ENST00000550346 DIAPH1O60610 1272 aaKnown RBP17.51■□□□□ 0.39
TROAP-212ENST00000550346 PEAK1Q9H792 1746 aa17.51■□□□□ 0.39
TROAP-212ENST00000550346 NUDCQ9Y266 331 aa17.51■□□□□ 0.39
TROAP-212ENST00000550346 THRAP3Q9Y2W1 955 aaKnown RBP17.51■□□□□ 0.39
TROAP-212ENST00000550346 COL5A2P05997 1499 aaPredicted RBP17.5■□□□□ 0.39
TROAP-212ENST00000550346 SPATA31A1Q5TZJ5 1347 aa17.5■□□□□ 0.39
TROAP-212ENST00000550346 ATRNO75882 1429 aa17.5■□□□□ 0.39
TROAP-212ENST00000550346 CRB1P82279 1406 aa17.5■□□□□ 0.39
TROAP-212ENST00000550346 CCDC184Q52MB2 194 aa17.5■□□□□ 0.39
TROAP-212ENST00000550346 LMO7Q8WWI1 1683 aa17.49■□□□□ 0.39
TROAP-212ENST00000550346 CCER2I3L3R5 266 aa17.48■□□□□ 0.39
TROAP-212ENST00000550346 EIF4A2Q14240 407 aaKnown RBP17.48■□□□□ 0.39
TROAP-212ENST00000550346 FAM98CQ17RN3 349 aaKnown RBP17.48■□□□□ 0.39
TROAP-212ENST00000550346 CDCA7Q9BWT1 371 aaPredicted RBP17.48■□□□□ 0.39
TROAP-212ENST00000550346 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
TROAP-212ENST00000550346 NBPF6Q5VWK0 638 aa17.47■□□□□ 0.39
TROAP-212ENST00000550346 NBPF4Q96M43 638 aa17.47■□□□□ 0.39
TROAP-212ENST00000550346 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
TROAP-212ENST00000550346 BARGINQ6ZT62 677 aa17.46■□□□□ 0.39
TROAP-212ENST00000550346 RAPGEF4Q8WZA2 1011 aa17.46■□□□□ 0.39
TROAP-212ENST00000550346 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
TROAP-212ENST00000550346 EYA1Q99502 592 aa17.45■□□□□ 0.38
TROAP-212ENST00000550346 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
TROAP-212ENST00000550346 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
TROAP-212ENST00000550346 ONECUT3O60422 494 aaPredicted RBP17.44■□□□□ 0.38
TROAP-212ENST00000550346 IL2RBP14784 551 aa17.44■□□□□ 0.38
TROAP-212ENST00000550346 IL13P35225 146 aa17.44■□□□□ 0.38
TROAP-212ENST00000550346 SEPT12Q8IYM1 358 aa17.44■□□□□ 0.38
TROAP-212ENST00000550346 EXOC5O00471 708 aa17.43■□□□□ 0.38
TROAP-212ENST00000550346 TATP17735 454 aaPredicted RBP17.43■□□□□ 0.38
TROAP-212ENST00000550346 PDE3BQ13370 1112 aa17.43■□□□□ 0.38
TROAP-212ENST00000550346 USHBP1Q8N6Y0 703 aa17.43■□□□□ 0.38
TROAP-212ENST00000550346 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
TROAP-212ENST00000550346 U2AF1L5P0DN76 240 aaPredicted RBP17.41■□□□□ 0.38
TROAP-212ENST00000550346 U2AF1Q01081 240 aaKnown RBP eCLIP17.41■□□□□ 0.38
TROAP-212ENST00000550346 DDB1Q16531 1140 aa17.41■□□□□ 0.38
TROAP-212ENST00000550346 SULT6B1Q6IMI4 303 aa17.41■□□□□ 0.38
TROAP-212ENST00000550346 FAM208AQ9UK61 1670 aaKnown RBP17.4■□□□□ 0.38
TROAP-212ENST00000550346 COL3A1P02461 1466 aaPredicted RBP17.4■□□□□ 0.38
TROAP-212ENST00000550346 NEFMP07197 916 aa17.4■□□□□ 0.38
TROAP-212ENST00000550346 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
TROAP-212ENST00000550346 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.37
TROAP-212ENST00000550346 ZCRB1Q8TBF4 217 aaKnown RBP17.38■□□□□ 0.37
TROAP-212ENST00000550346 SPG7Q9UQ90 795 aa17.38■□□□□ 0.37
TROAP-212ENST00000550346 IGSF1Q8N6C5 1336 aa17.38■□□□□ 0.37
TROAP-212ENST00000550346 HMOX1P09601 288 aa17.37■□□□□ 0.37
TROAP-212ENST00000550346 PLEKHO1Q53GL0 409 aaPredicted RBP17.37■□□□□ 0.37
TROAP-212ENST00000550346 KRT27Q7Z3Y8 459 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms