RNA–Protein interactions for RNA: ENST00000548196.1

C12orf42-206, Transcript of chromosome 12 open reading frame 42, humanhuman

TSL 4

Gene C12orf42, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-206ENST00000548196 SPATA31A7Q8IWB4 1347 aa28.6■■■□□ 2.17
C12orf42-206ENST00000548196 CGNL1Q0VF96 1302 aa28.59■■■□□ 2.17
C12orf42-206ENST00000548196 ZBTB7CA1YPR0 619 aa28.58■■■□□ 2.17
C12orf42-206ENST00000548196 CCDC9Q9Y3X0 531 aaKnown RBP28.58■■■□□ 2.17
C12orf42-206ENST00000548196 WASHC2AQ641Q2 1341 aa28.58■■■□□ 2.17
C12orf42-206ENST00000548196 STRN4Q9NRL3 753 aa28.57■■■□□ 2.16
C12orf42-206ENST00000548196 AXIN2Q9Y2T1 843 aa28.57■■■□□ 2.16
C12orf42-206ENST00000548196 ONECUT3O60422 494 aaPredicted RBP28.56■■■□□ 2.16
C12orf42-206ENST00000548196 EVA1CP58658 441 aa28.56■■■□□ 2.16
C12orf42-206ENST00000548196 BRWD3Q6RI45 1802 aa28.56■■■□□ 2.16
C12orf42-206ENST00000548196 SPATA31A1Q5TZJ5 1347 aa28.55■■■□□ 2.16
C12orf42-206ENST00000548196 ZEB1P37275 1124 aaPredicted RBP28.55■■■□□ 2.16
C12orf42-206ENST00000548196 THSD7AQ9UPZ6 1657 aa28.54■■■□□ 2.16
C12orf42-206ENST00000548196 LARP1Q6PKG0 1096 aaKnown RBP28.53■■■□□ 2.16
C12orf42-206ENST00000548196 CRB1P82279 1406 aa28.52■■■□□ 2.16
C12orf42-206ENST00000548196 BLMP54132 1417 aaPredicted RBP28.52■■■□□ 2.16
C12orf42-206ENST00000548196 NSD2O96028 1365 aa28.51■■■□□ 2.16
C12orf42-206ENST00000548196 WNK3Q9BYP7 1800 aa28.5■■■□□ 2.15
C12orf42-206ENST00000548196 MAP3K19Q56UN5 1328 aa28.5■■■□□ 2.15
C12orf42-206ENST00000548196 WDR17Q8IZU2 1322 aa28.5■■■□□ 2.15
C12orf42-206ENST00000548196 FAM208AQ9UK61 1670 aaKnown RBP28.49■■■□□ 2.15
C12orf42-206ENST00000548196 RTL1A6NKG5 1358 aa28.49■■■□□ 2.15
C12orf42-206ENST00000548196 MAP2P11137 1827 aaKnown RBP28.48■■■□□ 2.15
C12orf42-206ENST00000548196 PEAK1Q9H792 1746 aa28.47■■■□□ 2.15
C12orf42-206ENST00000548196 FBLN1P23142 703 aa28.47■■■□□ 2.15
C12orf42-206ENST00000548196 FAM98CQ17RN3 349 aaKnown RBP28.47■■■□□ 2.15
C12orf42-206ENST00000548196 IP6K1Q92551 441 aa28.47■■■□□ 2.15
C12orf42-206ENST00000548196 BARGINQ6ZT62 677 aa28.46■■■□□ 2.15
C12orf42-206ENST00000548196 SEPT12Q8IYM1 358 aa28.46■■■□□ 2.15
C12orf42-206ENST00000548196 THRAP3Q9Y2W1 955 aaKnown RBP28.46■■■□□ 2.15
C12orf42-206ENST00000548196 ERBB3P21860 1342 aa28.45■■■□□ 2.15
C12orf42-206ENST00000548196 TCP11L2Q8N4U5 519 aa28.45■■■□□ 2.14
C12orf42-206ENST00000548196 KNSTRNQ9Y448 316 aa28.45■■■□□ 2.14
C12orf42-206ENST00000548196 KIF24Q5T7B8 1368 aa28.45■■■□□ 2.14
C12orf42-206ENST00000548196 PARP4Q9UKK3 1724 aaKnown RBP28.44■■■□□ 2.14
C12orf42-206ENST00000548196 PER1O15534 1290 aaPredicted RBP28.44■■■□□ 2.14
C12orf42-206ENST00000548196 HOXC9P31274 260 aa28.43■■■□□ 2.14
C12orf42-206ENST00000548196 RRS1Q15050 365 aaKnown RBP28.43■■■□□ 2.14
C12orf42-206ENST00000548196 AMER1Q5JTC6 1135 aaPredicted RBP28.42■■■□□ 2.14
C12orf42-206ENST00000548196 TOM1L2Q6ZVM7 507 aa28.42■■■□□ 2.14
C12orf42-206ENST00000548196 USP35Q9P2H5 1018 aa28.42■■■□□ 2.14
C12orf42-206ENST00000548196 EP400Q96L91 3159 aa28.42■■■□□ 2.14
C12orf42-206ENST00000548196 AMPHP49418 695 aa28.41■■■□□ 2.14
C12orf42-206ENST00000548196 ANKRD24Q8TF21 1146 aa28.4■■■□□ 2.14
C12orf42-206ENST00000548196 CARD10Q9BWT7 1032 aa28.4■■■□□ 2.14
C12orf42-206ENST00000548196 CSB-PGBD3P0DP91 1061 aa28.39■■■□□ 2.14
C12orf42-206ENST00000548196 FLT4P35916 1363 aa28.38■■■□□ 2.13
C12orf42-206ENST00000548196 RGPD2P0DJD1 1756 aa28.37■■■□□ 2.13
C12orf42-206ENST00000548196 NPC1L1Q9UHC9 1359 aa28.37■■■□□ 2.13
C12orf42-206ENST00000548196 LRRC37A3O60309 1634 aa28.36■■■□□ 2.13
C12orf42-206ENST00000548196 A0A0G2JS52 829 aa28.36■■■□□ 2.13
C12orf42-206ENST00000548196 MYT1Q01538 1121 aa28.36■■■□□ 2.13
C12orf42-206ENST00000548196 INSRP06213 1382 aa28.36■■■□□ 2.13
C12orf42-206ENST00000548196 KRT27Q7Z3Y8 459 aa28.35■■■□□ 2.13
C12orf42-206ENST00000548196 DISP2A7MBM2 1401 aa28.35■■■□□ 2.13
C12orf42-206ENST00000548196 EMILIN1Q9Y6C2 1016 aa28.34■■■□□ 2.13
C12orf42-206ENST00000548196 SMG6Q86US8 1419 aaKnown RBP28.34■■■□□ 2.13
C12orf42-206ENST00000548196 POLKQ9UBT6 870 aa28.33■■■□□ 2.13
C12orf42-206ENST00000548196 MORC1Q86VD1 984 aa28.32■■■□□ 2.12
C12orf42-206ENST00000548196 HSP90AB2PQ58FF8 381 aa28.31■■■□□ 2.12
C12orf42-206ENST00000548196 UPF1Q92900 1129 aaKnown RBP eCLIP28.31■■■□□ 2.12
C12orf42-206ENST00000548196 CDCA7Q9BWT1 371 aaPredicted RBP28.31■■■□□ 2.12
C12orf42-206ENST00000548196 NLRP2Q9NX02 1062 aa28.31■■■□□ 2.12
C12orf42-206ENST00000548196 TNNT2P45379 298 aaPredicted RBP28.29■■■□□ 2.12
C12orf42-206ENST00000548196 LTV1Q96GA3 475 aaPredicted RBP28.29■■■□□ 2.12
C12orf42-206ENST00000548196 PPM1GO15355 546 aaPredicted RBP28.24■■■□□ 2.11
C12orf42-206ENST00000548196 CC2D1BQ5T0F9 858 aaKnown RBP28.23■■■□□ 2.11
C12orf42-206ENST00000548196 PDE3BQ13370 1112 aa28.22■■■□□ 2.11
C12orf42-206ENST00000548196 DDB1Q16531 1140 aa28.22■■■□□ 2.11
C12orf42-206ENST00000548196 TNS2Q63HR2 1409 aa28.22■■■□□ 2.11
C12orf42-206ENST00000548196 NCAPD2Q15021 1401 aa28.21■■■□□ 2.11
C12orf42-206ENST00000548196 IL2RBP14784 551 aa28.21■■■□□ 2.11
C12orf42-206ENST00000548196 NBPF6Q5VWK0 638 aa28.21■■■□□ 2.11
C12orf42-206ENST00000548196 NBPF4Q96M43 638 aa28.21■■■□□ 2.11
C12orf42-206ENST00000548196 RGPD1P0DJD0 1748 aa28.21■■■□□ 2.11
C12orf42-206ENST00000548196 CCDC125Q86Z20 511 aa28.19■■■□□ 2.1
C12orf42-206ENST00000548196 FAM182BQ5T319 152 aa28.18■■■□□ 2.1
C12orf42-206ENST00000548196 SBF2Q86WG5 1849 aa28.18■■■□□ 2.1
C12orf42-206ENST00000548196 SHANK3Q9BYB0 1731 aa28.17■■■□□ 2.1
C12orf42-206ENST00000548196 TNS1Q9HBL0 1735 aaKnown RBP28.17■■■□□ 2.1
C12orf42-206ENST00000548196 FAM196AQ6ZSG2 479 aa28.16■■■□□ 2.1
C12orf42-206ENST00000548196 MEGF6O75095 1541 aa28.16■■■□□ 2.1
C12orf42-206ENST00000548196 OVOS2A0A0G2JMS6 1433 aa28.16■■■□□ 2.1
C12orf42-206ENST00000548196 EXOC5O00471 708 aa28.15■■■□□ 2.1
C12orf42-206ENST00000548196 EIF4A2Q14240 407 aaKnown RBP28.15■■■□□ 2.1
C12orf42-206ENST00000548196 BCL9O00512 1426 aa28.14■■■□□ 2.1
C12orf42-206ENST00000548196 USHBP1Q8N6Y0 703 aa28.12■■■□□ 2.09
C12orf42-206ENST00000548196 MARCH10Q8NA82 808 aaPredicted RBP28.12■■■□□ 2.09
C12orf42-206ENST00000548196 MTHFSP49914 203 aa28.11■■■□□ 2.09
C12orf42-206ENST00000548196 EYA1Q99502 592 aa28.11■■■□□ 2.09
C12orf42-206ENST00000548196 PKD1L3Q7Z443 1732 aa28.11■■■□□ 2.09
C12orf42-206ENST00000548196 DDX10Q13206 875 aaKnown RBP28.08■■■□□ 2.09
C12orf42-206ENST00000548196 IGSF1Q8N6C5 1336 aa28.08■■■□□ 2.09
C12orf42-206ENST00000548196 CNGB1Q14028 1251 aaPredicted RBP28.07■■■□□ 2.08
C12orf42-206ENST00000548196 RAPGEF4Q8WZA2 1011 aa28.07■■■□□ 2.08
C12orf42-206ENST00000548196 COL3A1P02461 1466 aaPredicted RBP28.06■■■□□ 2.08
C12orf42-206ENST00000548196 PLEKHG2Q9H7P9 1386 aa28.05■■■□□ 2.08
C12orf42-206ENST00000548196 PARD3Q8TEW0 1356 aa28.04■■■□□ 2.08
C12orf42-206ENST00000548196 TATP17735 454 aaPredicted RBP28.04■■■□□ 2.08
C12orf42-206ENST00000548196 IL13P35225 146 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms