RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 AXIN2Q9Y2T1 843 aa23.71■■□□□ 1.39
HDAC7-227ENST00000548080 GLI3P10071 1580 aa23.71■■□□□ 1.39
HDAC7-227ENST00000548080 AATKQ6ZMQ8 1374 aa23.69■■□□□ 1.38
HDAC7-227ENST00000548080 RBM6P78332 1123 aaKnown RBP23.69■■□□□ 1.38
HDAC7-227ENST00000548080 CNGB1Q14028 1251 aaPredicted RBP23.69■■□□□ 1.38
HDAC7-227ENST00000548080 VPS72Q15906 364 aa23.69■■□□□ 1.38
HDAC7-227ENST00000548080 ANKRD26Q9UPS8 1709 aa23.69■■□□□ 1.38
HDAC7-227ENST00000548080 RRS1Q15050 365 aaKnown RBP23.68■■□□□ 1.38
HDAC7-227ENST00000548080 KNSTRNQ9Y448 316 aa23.68■■□□□ 1.38
HDAC7-227ENST00000548080 TNNT2P45379 298 aaPredicted RBP23.68■■□□□ 1.38
HDAC7-227ENST00000548080 EVA1CP58658 441 aa23.68■■□□□ 1.38
HDAC7-227ENST00000548080 GJD4Q96KN9 370 aaPredicted RBP23.68■■□□□ 1.38
HDAC7-227ENST00000548080 COL5A2P05997 1499 aaPredicted RBP23.67■■□□□ 1.38
HDAC7-227ENST00000548080 LARP1Q6PKG0 1096 aaKnown RBP23.67■■□□□ 1.38
HDAC7-227ENST00000548080 RGS12O14924 1447 aa23.66■■□□□ 1.38
HDAC7-227ENST00000548080 MAP3K19Q56UN5 1328 aa23.66■■□□□ 1.38
HDAC7-227ENST00000548080 USP35Q9P2H5 1018 aa23.65■■□□□ 1.38
HDAC7-227ENST00000548080 PER1O15534 1290 aaPredicted RBP23.62■■□□□ 1.37
HDAC7-227ENST00000548080 SPATA31A5Q5VU36 1347 aa23.62■■□□□ 1.37
HDAC7-227ENST00000548080 SPATA31A7Q8IWB4 1347 aa23.62■■□□□ 1.37
HDAC7-227ENST00000548080 PEAK1Q9H792 1746 aa23.62■■□□□ 1.37
HDAC7-227ENST00000548080 AMPHP49418 695 aa23.62■■□□□ 1.37
HDAC7-227ENST00000548080 AMER1Q5JTC6 1135 aaPredicted RBP23.62■■□□□ 1.37
HDAC7-227ENST00000548080 EMILIN1Q9Y6C2 1016 aa23.62■■□□□ 1.37
HDAC7-227ENST00000548080 FAM98CQ17RN3 349 aaKnown RBP23.61■■□□□ 1.37
HDAC7-227ENST00000548080 CC2D1BQ5T0F9 858 aaKnown RBP23.61■■□□□ 1.37
HDAC7-227ENST00000548080 LTV1Q96GA3 475 aaPredicted RBP23.61■■□□□ 1.37
HDAC7-227ENST00000548080 MAP2P11137 1827 aaKnown RBP23.6■■□□□ 1.37
HDAC7-227ENST00000548080 CSB-PGBD3P0DP91 1061 aa23.6■■□□□ 1.37
HDAC7-227ENST00000548080 PRKRIP1Q9H875 184 aaPredicted RBP23.6■■□□□ 1.37
HDAC7-227ENST00000548080 A0A0G2JS52 829 aa23.59■■□□□ 1.37
HDAC7-227ENST00000548080 MYT1Q01538 1121 aa23.59■■□□□ 1.37
HDAC7-227ENST00000548080 MORC1Q86VD1 984 aa23.59■■□□□ 1.37
HDAC7-227ENST00000548080 SPATA31A1Q5TZJ5 1347 aa23.59■■□□□ 1.37
HDAC7-227ENST00000548080 ABCC6O95255 1503 aa23.59■■□□□ 1.37
HDAC7-227ENST00000548080 CDK12Q9NYV4 1490 aaPredicted RBP23.58■■□□□ 1.37
HDAC7-227ENST00000548080 NSD2O96028 1365 aa23.58■■□□□ 1.37
HDAC7-227ENST00000548080 CCER2I3L3R5 266 aa23.58■■□□□ 1.37
HDAC7-227ENST00000548080 PPM1GO15355 546 aaPredicted RBP23.58■■□□□ 1.37
HDAC7-227ENST00000548080 HOXC9P31274 260 aa23.58■■□□□ 1.37
HDAC7-227ENST00000548080 TOM1L2Q6ZVM7 507 aa23.58■■□□□ 1.37
HDAC7-227ENST00000548080 IP6K1Q92551 441 aa23.58■■□□□ 1.37
HDAC7-227ENST00000548080 WDR17Q8IZU2 1322 aa23.57■■□□□ 1.36
HDAC7-227ENST00000548080 ANKRD24Q8TF21 1146 aa23.57■■□□□ 1.36
HDAC7-227ENST00000548080 CRB1P82279 1406 aa23.57■■□□□ 1.36
HDAC7-227ENST00000548080 BRWD3Q6RI45 1802 aa23.56■■□□□ 1.36
HDAC7-227ENST00000548080 SEPT12Q8IYM1 358 aa23.56■■□□□ 1.36
HDAC7-227ENST00000548080 ERBB3P21860 1342 aa23.55■■□□□ 1.36
HDAC7-227ENST00000548080 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
HDAC7-227ENST00000548080 POLKQ9UBT6 870 aa23.54■■□□□ 1.36
HDAC7-227ENST00000548080 BLMP54132 1417 aaPredicted RBP23.54■■□□□ 1.36
HDAC7-227ENST00000548080 RTL1A6NKG5 1358 aa23.53■■□□□ 1.36
HDAC7-227ENST00000548080 HSP90AB2PQ58FF8 381 aa23.53■■□□□ 1.36
HDAC7-227ENST00000548080 NLRP2Q9NX02 1062 aa23.53■■□□□ 1.36
HDAC7-227ENST00000548080 TCP11L2Q8N4U5 519 aa23.51■■□□□ 1.35
HDAC7-227ENST00000548080 THSD7AQ9UPZ6 1657 aa23.51■■□□□ 1.35
HDAC7-227ENST00000548080 FLT4P35916 1363 aa23.51■■□□□ 1.35
HDAC7-227ENST00000548080 RALBP1Q15311 655 aa23.49■■□□□ 1.35
HDAC7-227ENST00000548080 WNK3Q9BYP7 1800 aa23.49■■□□□ 1.35
HDAC7-227ENST00000548080 ONECUT3O60422 494 aaPredicted RBP23.49■■□□□ 1.35
HDAC7-227ENST00000548080 CARD10Q9BWT7 1032 aa23.49■■□□□ 1.35
HDAC7-227ENST00000548080 INSRP06213 1382 aa23.47■■□□□ 1.35
HDAC7-227ENST00000548080 USHBP1Q8N6Y0 703 aa23.47■■□□□ 1.35
HDAC7-227ENST00000548080 NPC1L1Q9UHC9 1359 aa23.46■■□□□ 1.35
HDAC7-227ENST00000548080 FAM182BQ5T319 152 aa23.46■■□□□ 1.35
HDAC7-227ENST00000548080 FAM208AQ9UK61 1670 aaKnown RBP23.46■■□□□ 1.35
HDAC7-227ENST00000548080 BARGINQ6ZT62 677 aa23.45■■□□□ 1.34
HDAC7-227ENST00000548080 THRAP3Q9Y2W1 955 aaKnown RBP23.44■■□□□ 1.34
HDAC7-227ENST00000548080 KIF24Q5T7B8 1368 aa23.44■■□□□ 1.34
HDAC7-227ENST00000548080 PARD3Q8TEW0 1356 aa23.44■■□□□ 1.34
HDAC7-227ENST00000548080 SMG6Q86US8 1419 aaKnown RBP23.43■■□□□ 1.34
HDAC7-227ENST00000548080 SOCS7O14512 581 aa23.43■■□□□ 1.34
HDAC7-227ENST00000548080 NBPF6Q5VWK0 638 aa23.43■■□□□ 1.34
HDAC7-227ENST00000548080 NBPF4Q96M43 638 aa23.43■■□□□ 1.34
HDAC7-227ENST00000548080 PARP4Q9UKK3 1724 aaKnown RBP23.42■■□□□ 1.34
HDAC7-227ENST00000548080 LRRC37A3O60309 1634 aa23.42■■□□□ 1.34
HDAC7-227ENST00000548080 KRT27Q7Z3Y8 459 aa23.42■■□□□ 1.34
HDAC7-227ENST00000548080 DISP2A7MBM2 1401 aa23.41■■□□□ 1.34
HDAC7-227ENST00000548080 MTHFSP49914 203 aa23.4■■□□□ 1.34
HDAC7-227ENST00000548080 EIF4A2Q14240 407 aaKnown RBP23.4■■□□□ 1.34
HDAC7-227ENST00000548080 MYBBP1AQ9BQG0 1328 aaKnown RBP23.4■■□□□ 1.34
HDAC7-227ENST00000548080 EP400Q96L91 3159 aa23.38■■□□□ 1.33
HDAC7-227ENST00000548080 IL2RBP14784 551 aa23.36■■□□□ 1.33
HDAC7-227ENST00000548080 PDE3BQ13370 1112 aa23.36■■□□□ 1.33
HDAC7-227ENST00000548080 DDB1Q16531 1140 aa23.36■■□□□ 1.33
HDAC7-227ENST00000548080 CCDC184Q52MB2 194 aa23.36■■□□□ 1.33
HDAC7-227ENST00000548080 EYA1Q99502 592 aa23.36■■□□□ 1.33
HDAC7-227ENST00000548080 MRS2Q9HD23 443 aa23.36■■□□□ 1.33
HDAC7-227ENST00000548080 MEGF6O75095 1541 aa23.35■■□□□ 1.33
HDAC7-227ENST00000548080 PPP2R1AP30153 589 aa23.33■■□□□ 1.33
HDAC7-227ENST00000548080 UPF1Q92900 1129 aaKnown RBP eCLIP23.32■■□□□ 1.32
HDAC7-227ENST00000548080 YTHDC1Q96MU7 727 aaKnown RBP23.32■■□□□ 1.32
HDAC7-227ENST00000548080 CDCA7Q9BWT1 371 aaPredicted RBP23.32■■□□□ 1.32
HDAC7-227ENST00000548080 TNS2Q63HR2 1409 aa23.31■■□□□ 1.32
HDAC7-227ENST00000548080 EXOC5O00471 708 aa23.3■■□□□ 1.32
HDAC7-227ENST00000548080 MARCH10Q8NA82 808 aaPredicted RBP23.3■■□□□ 1.32
HDAC7-227ENST00000548080 IL13P35225 146 aa23.29■■□□□ 1.32
HDAC7-227ENST00000548080 RAPGEF4Q8WZA2 1011 aa23.29■■□□□ 1.32
HDAC7-227ENST00000548080 COL3A1P02461 1466 aaPredicted RBP23.28■■□□□ 1.32
HDAC7-227ENST00000548080 NCAPD2Q15021 1401 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms